RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 ZDHHC15Q96MV8 337 aa6.29□□□□□ -1.4
PCF11-205ENST00000530906 CLIC6Q96NY7 704 aa6.29□□□□□ -1.4
PCF11-205ENST00000530906 CTAGE1Q96RT6 745 aa6.29□□□□□ -1.4
PCF11-205ENST00000530906 MAP7D2Q96T17 732 aa6.29□□□□□ -1.4
PCF11-205ENST00000530906 CSRNP2Q9H175 543 aa6.29□□□□□ -1.4
PCF11-205ENST00000530906 VPS33BQ9H267 617 aa6.29□□□□□ -1.4
PCF11-205ENST00000530906 KCNF1Q9H3M0 494 aa6.29□□□□□ -1.4
PCF11-205ENST00000530906 RIOX1Q9H6W3 641 aa6.29□□□□□ -1.4
PCF11-205ENST00000530906 MARK1Q9P0L2 795 aa6.29□□□□□ -1.4
PCF11-205ENST00000530906 SERPINB13Q9UIV8 391 aa6.29□□□□□ -1.4
PCF11-205ENST00000530906 STX8Q9UNK0 236 aa6.29□□□□□ -1.4
PCF11-205ENST00000530906 PAXBP1Q9Y5B6 917 aa6.29□□□□□ -1.4
PCF11-205ENST00000530906 PSME4Q14997 1843 aa6.28□□□□□ -1.4
PCF11-205ENST00000530906 H0YIN7 160 aa6.28□□□□□ -1.4
PCF11-205ENST00000530906 STXBP3O00186 592 aa6.28□□□□□ -1.4
PCF11-205ENST00000530906 NMT2O60551 498 aa6.28□□□□□ -1.4
PCF11-205ENST00000530906 TTLL1O95922 423 aa6.28□□□□□ -1.4
PCF11-205ENST00000530906 APBA3O96018 575 aa6.28□□□□□ -1.4
PCF11-205ENST00000530906 MMP10P09238 476 aa6.28□□□□□ -1.4
PCF11-205ENST00000530906 SFPQP23246 707 aaKnown RBP eCLIP6.28□□□□□ -1.4
PCF11-205ENST00000530906 MMP14P50281 582 aa6.28□□□□□ -1.4
PCF11-205ENST00000530906 EPHA4P54764 986 aa6.28□□□□□ -1.4
PCF11-205ENST00000530906 GTF2IP78347 998 aa6.28□□□□□ -1.4
PCF11-205ENST00000530906 FANCCQ00597 558 aa6.28□□□□□ -1.4
PCF11-205ENST00000530906 TRAF1Q13077 416 aa6.28□□□□□ -1.4
PCF11-205ENST00000530906 NONOQ15233 471 aaKnown RBP eCLIP6.28□□□□□ -1.4
PCF11-205ENST00000530906 EML3Q32P44 896 aa6.28□□□□□ -1.4
PCF11-205ENST00000530906 SOGA3Q5TF21 947 aa6.28□□□□□ -1.4
PCF11-205ENST00000530906 DTHD1Q6ZMT9 781 aa6.28□□□□□ -1.4
PCF11-205ENST00000530906 PIK3AP1Q6ZUJ8 805 aa6.28□□□□□ -1.4
PCF11-205ENST00000530906 COL23A1Q86Y22 540 aaPredicted RBP6.28□□□□□ -1.4
PCF11-205ENST00000530906 CMTR1Q8N1G2 835 aaKnown RBP6.28□□□□□ -1.4
PCF11-205ENST00000530906 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.28□□□□□ -1.4
PCF11-205ENST00000530906 MYRIPQ8NFW9 859 aa6.28□□□□□ -1.4
PCF11-205ENST00000530906 CCDC47Q96A33 483 aaKnown RBP6.28□□□□□ -1.4
PCF11-205ENST00000530906 SHISA4Q96DD7 197 aa6.28□□□□□ -1.4
PCF11-205ENST00000530906 DYNLL2Q96FJ2 89 aa6.28□□□□□ -1.4
PCF11-205ENST00000530906 PLVAPQ9BX97 442 aa6.28□□□□□ -1.4
PCF11-205ENST00000530906 IDI2Q9BXS1 227 aa6.28□□□□□ -1.4
PCF11-205ENST00000530906 RAB34Q9BZG1 259 aa6.28□□□□□ -1.4
PCF11-205ENST00000530906 CCSER1Q9C0I3 900 aa6.28□□□□□ -1.4
PCF11-205ENST00000530906 ALG2Q9H553 416 aa6.28□□□□□ -1.4
PCF11-205ENST00000530906 ZNF358Q9NW07 568 aa6.28□□□□□ -1.4
PCF11-205ENST00000530906 MTMR4Q9NYA4 1195 aa6.28□□□□□ -1.4
PCF11-205ENST00000530906 SERPINA10Q9UK55 444 aa6.28□□□□□ -1.4
PCF11-205ENST00000530906 MAN1B1Q9UKM7 699 aa6.28□□□□□ -1.4
PCF11-205ENST00000530906 PRR12Q9ULL5 1215 aa6.28□□□□□ -1.4
PCF11-205ENST00000530906 TTF2Q9UNY4 1162 aaKnown RBP6.28□□□□□ -1.4
PCF11-205ENST00000530906 USP17L3A6NCW0 530 aa6.27□□□□□ -1.41
PCF11-205ENST00000530906 USP17L4A6NCW7 530 aa6.27□□□□□ -1.41
PCF11-205ENST00000530906 GOLGA6L9A6NEM1 432 aa6.27□□□□□ -1.41
PCF11-205ENST00000530906 UBE2Q2LH0YL09 131 aa6.27□□□□□ -1.41
PCF11-205ENST00000530906 SMIM22K7EJ46 135 aa6.27□□□□□ -1.41
PCF11-205ENST00000530906 EML1O00423 815 aa6.27□□□□□ -1.41
PCF11-205ENST00000530906 BIN1O00499 593 aa6.27□□□□□ -1.41
PCF11-205ENST00000530906 BACH1O14867 736 aa6.27□□□□□ -1.41
PCF11-205ENST00000530906 LZTS3O60299 673 aaPredicted RBP6.27□□□□□ -1.41
PCF11-205ENST00000530906 SERPINC1P01008 464 aa6.27□□□□□ -1.41
PCF11-205ENST00000530906 SKILP12757 684 aa6.27□□□□□ -1.41
PCF11-205ENST00000530906 PRKCSHP14314 528 aaPredicted RBP6.27□□□□□ -1.41
PCF11-205ENST00000530906 GCFC2P16383 781 aaKnown RBP6.27□□□□□ -1.41
PCF11-205ENST00000530906 ZNF18P17022 549 aa6.27□□□□□ -1.41
PCF11-205ENST00000530906 RXRBP28702 533 aa6.27□□□□□ -1.41
PCF11-205ENST00000530906 NAPAP54920 295 aa6.27□□□□□ -1.41
PCF11-205ENST00000530906 UBASH3AP57075 661 aa6.27□□□□□ -1.41
PCF11-205ENST00000530906 AMPD3Q01432 767 aa6.27□□□□□ -1.41
PCF11-205ENST00000530906 DPYDQ12882 1025 aa6.27□□□□□ -1.41
PCF11-205ENST00000530906 KCNB1Q14721 858 aa6.27□□□□□ -1.41
PCF11-205ENST00000530906 SYCP1Q15431 976 aa6.27□□□□□ -1.41
PCF11-205ENST00000530906 TEAD4Q15561 434 aa6.27□□□□□ -1.41
PCF11-205ENST00000530906 GRIK5Q16478 980 aa6.27□□□□□ -1.41
PCF11-205ENST00000530906 ZNF827Q17R98 1081 aa6.27□□□□□ -1.41
PCF11-205ENST00000530906 SPATA1Q5VX52 437 aa6.27□□□□□ -1.41
PCF11-205ENST00000530906 WWC2Q6AWC2 1192 aa6.27□□□□□ -1.41
PCF11-205ENST00000530906 USP17L1Q7RTZ2 530 aa6.27□□□□□ -1.41
PCF11-205ENST00000530906 HEATR3Q7Z4Q2 680 aa6.27□□□□□ -1.41
PCF11-205ENST00000530906 NEK8Q86SG6 692 aa6.27□□□□□ -1.41
PCF11-205ENST00000530906 FOXP4Q8IVH2 680 aaPredicted RBP6.27□□□□□ -1.41
PCF11-205ENST00000530906 VSTM4Q8IW00 320 aa6.27□□□□□ -1.41
PCF11-205ENST00000530906 REXO1Q8N1G1 1221 aaKnown RBP6.27□□□□□ -1.41
PCF11-205ENST00000530906 C4orf32Q8N8J7 132 aa6.27□□□□□ -1.41
PCF11-205ENST00000530906 ANKRD20A12PQ8NF67 263 aa6.27□□□□□ -1.41
PCF11-205ENST00000530906 CACTINQ8WUQ7 758 aaKnown RBP6.27□□□□□ -1.41
PCF11-205ENST00000530906 CEP95Q96GE4 821 aa6.27□□□□□ -1.41
PCF11-205ENST00000530906 PAGE5Q96GU1 130 aa6.27□□□□□ -1.41
PCF11-205ENST00000530906 XPO4Q9C0E2 1151 aaKnown RBP6.27□□□□□ -1.41
PCF11-205ENST00000530906 LRRC27Q9C0I9 530 aa6.27□□□□□ -1.41
PCF11-205ENST00000530906 IFNKQ9P0W0 207 aa6.27□□□□□ -1.41
PCF11-205ENST00000530906 SAP30BPQ9UHR5 308 aaKnown RBP6.27□□□□□ -1.41
PCF11-205ENST00000530906 PYCARDQ9ULZ3 195 aa6.27□□□□□ -1.41
PCF11-205ENST00000530906 NOD1Q9Y239 953 aa6.27□□□□□ -1.41
PCF11-205ENST00000530906 R3HCC1Q9Y3T6 440 aaKnown RBP6.27□□□□□ -1.41
PCF11-205ENST00000530906 GJA3Q9Y6H8 435 aa6.27□□□□□ -1.41
PCF11-205ENST00000530906 ATRNL1Q5VV63 1379 aa6.27□□□□□ -1.41
PCF11-205ENST00000530906 ZNF646O15015 1829 aaPredicted RBP6.27□□□□□ -1.41
PCF11-205ENST00000530906 ELOA3CA0A087WX78 387 aaPredicted RBP6.26□□□□□ -1.41
PCF11-205ENST00000530906 PNMA6FA0A0J9YX94 578 aa6.26□□□□□ -1.41
PCF11-205ENST00000530906 VWA3AA6NCI4 1184 aa6.26□□□□□ -1.41
PCF11-205ENST00000530906 ELOA3DA6NLF2 546 aaPredicted RBP6.26□□□□□ -1.41
PCF11-205ENST00000530906 CYTH3O43739 400 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms