RNA–Protein interactions for RNA: ENST00000530887.5

PSMC3-208, Transcript of proteasome 26S subunit, ATPase 3, humanhuman

TSL 2

Gene PSMC3, Length 891 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3-208ENST00000530887 TEX2Q8IWB9 1127 aa21.02■□□□□ 0.96
PSMC3-208ENST00000530887 RRP36Q96EU6 259 aaKnown RBP21.02■□□□□ 0.96
PSMC3-208ENST00000530887 ARIH1Q9Y4X5 557 aaPredicted RBP21.02■□□□□ 0.96
PSMC3-208ENST00000530887 LINC01553A4QN01 128 aa21.01■□□□□ 0.95
PSMC3-208ENST00000530887 SPATA31C2B4DYI2 1134 aa21.01■□□□□ 0.95
PSMC3-208ENST00000530887 PIK3CDO00329 1044 aa21.01■□□□□ 0.95
PSMC3-208ENST00000530887 SMARCC2Q8TAQ2 1214 aa21.01■□□□□ 0.95
PSMC3-208ENST00000530887 BAZ2BQ9UIF8 2168 aaKnown RBP21■□□□□ 0.95
PSMC3-208ENST00000530887 TCF20Q9UGU0 1960 aaKnown RBP21■□□□□ 0.95
PSMC3-208ENST00000530887 E7EWF7 191 aa21■□□□□ 0.95
PSMC3-208ENST00000530887 SMIM10L2AP0DMW4 78 aa21■□□□□ 0.95
PSMC3-208ENST00000530887 SMIM10L2BP0DMW5 78 aa21■□□□□ 0.95
PSMC3-208ENST00000530887 CALM1P0DP23 149 aa21■□□□□ 0.95
PSMC3-208ENST00000530887 CALM2P0DP24 149 aa21■□□□□ 0.95
PSMC3-208ENST00000530887 CALM3P0DP25 149 aa21■□□□□ 0.95
PSMC3-208ENST00000530887 CHMLP26374 656 aa21■□□□□ 0.95
PSMC3-208ENST00000530887 KCNQ1P51787 676 aa21■□□□□ 0.95
PSMC3-208ENST00000530887 HTRA4P83105 476 aaPredicted RBP21■□□□□ 0.95
PSMC3-208ENST00000530887 SP2Q02086 613 aa21■□□□□ 0.95
PSMC3-208ENST00000530887 PUS10Q3MIT2 529 aaKnown RBP21■□□□□ 0.95
PSMC3-208ENST00000530887 PCNX4Q63HM2 1172 aa21■□□□□ 0.95
PSMC3-208ENST00000530887 CASC1Q6TDU7 716 aa21■□□□□ 0.95
PSMC3-208ENST00000530887 FAM43BQ6ZT52 329 aaPredicted RBP21■□□□□ 0.95
PSMC3-208ENST00000530887 MYOCDQ8IZQ8 938 aa21■□□□□ 0.95
PSMC3-208ENST00000530887 FBXO22Q8NEZ5 403 aa21■□□□□ 0.95
PSMC3-208ENST00000530887 DBF4BQ8NFT6 615 aa21■□□□□ 0.95
PSMC3-208ENST00000530887 SP7Q8TDD2 431 aaPredicted RBP21■□□□□ 0.95
PSMC3-208ENST00000530887 TNPO1Q92973 898 aaKnown RBP21■□□□□ 0.95
PSMC3-208ENST00000530887 SUGCTQ9HAC7 445 aa21■□□□□ 0.95
PSMC3-208ENST00000530887 NRCAMQ92823 1304 aa21■□□□□ 0.95
PSMC3-208ENST00000530887 PTPRSQ13332 1948 aa21■□□□□ 0.95
PSMC3-208ENST00000530887 SIP14410 1827 aa20.99■□□□□ 0.95
PSMC3-208ENST00000530887 MICAL3Q7RTP6 2002 aa20.99■□□□□ 0.95
PSMC3-208ENST00000530887 LCHNA4D1U4 455 aa20.99■□□□□ 0.95
PSMC3-208ENST00000530887 SGSM2O43147 1006 aa20.99■□□□□ 0.95
PSMC3-208ENST00000530887 CYTH3O43739 400 aa20.99■□□□□ 0.95
PSMC3-208ENST00000530887 ARHGEF15O94989 841 aa20.99■□□□□ 0.95
PSMC3-208ENST00000530887 GSPT1P15170 499 aaKnown RBP20.99■□□□□ 0.95
PSMC3-208ENST00000530887 TIGD5Q53EQ6 642 aa20.99■□□□□ 0.95
PSMC3-208ENST00000530887 TAF2Q6P1X5 1199 aa20.99■□□□□ 0.95
PSMC3-208ENST00000530887 RSPH3Q86UC2 560 aa20.99■□□□□ 0.95
PSMC3-208ENST00000530887 IL31RAQ8NI17 732 aa20.99■□□□□ 0.95
PSMC3-208ENST00000530887 GDPD5Q8WTR4 605 aa20.99■□□□□ 0.95
PSMC3-208ENST00000530887 COL4A6Q14031 1691 aa20.99■□□□□ 0.95
PSMC3-208ENST00000530887 BRWD1Q9NSI6 2320 aa20.98■□□□□ 0.95
PSMC3-208ENST00000530887 MAFGO15525 162 aa20.98■□□□□ 0.95
PSMC3-208ENST00000530887 ZNF200P98182 395 aaPredicted RBP20.98■□□□□ 0.95
PSMC3-208ENST00000530887 MKRN4PQ13434 485 aaPredicted RBP20.98■□□□□ 0.95
PSMC3-208ENST00000530887 MBTPS1Q14703 1052 aa20.98■□□□□ 0.95
PSMC3-208ENST00000530887 RPAINQ86UA6 219 aa20.98■□□□□ 0.95
PSMC3-208ENST00000530887 MAP4K1Q92918 833 aa20.98■□□□□ 0.95
PSMC3-208ENST00000530887 GPRASP2Q96D09 838 aa20.98■□□□□ 0.95
PSMC3-208ENST00000530887 TMEM87BQ96K49 555 aa20.98■□□□□ 0.95
PSMC3-208ENST00000530887 GPR20Q99678 358 aa20.98■□□□□ 0.95
PSMC3-208ENST00000530887 RNPEPQ9H4A4 650 aa20.98■□□□□ 0.95
PSMC3-208ENST00000530887 RWDD3Q9Y3V2 267 aa20.98■□□□□ 0.95
PSMC3-208ENST00000530887 KAT6AQ92794 2004 aa20.97■□□□□ 0.95
PSMC3-208ENST00000530887 COL4A4P53420 1690 aaPredicted RBP20.97■□□□□ 0.95
PSMC3-208ENST00000530887 NCK2O43639 380 aa20.97■□□□□ 0.95
PSMC3-208ENST00000530887 MRPS9P82933 396 aaKnown RBP20.97■□□□□ 0.95
PSMC3-208ENST00000530887 CYFIP1Q7L576 1253 aa20.97■□□□□ 0.95
PSMC3-208ENST00000530887 IGDCC4Q8TDY8 1250 aa20.97■□□□□ 0.95
PSMC3-208ENST00000530887 TOP1MTQ969P6 601 aa20.97■□□□□ 0.95
PSMC3-208ENST00000530887 YME1L1Q96TA2 773 aa20.97■□□□□ 0.95
PSMC3-208ENST00000530887 IL25Q9H293 177 aa20.97■□□□□ 0.95
PSMC3-208ENST00000530887 EHMT1Q9H9B1 1298 aa20.97■□□□□ 0.95
PSMC3-208ENST00000530887 FAM50BQ9Y247 325 aa20.97■□□□□ 0.95
PSMC3-208ENST00000530887 TREHO43280 583 aa20.96■□□□□ 0.95
PSMC3-208ENST00000530887 MCM5P33992 734 aa20.96■□□□□ 0.95
PSMC3-208ENST00000530887 PTH1RQ03431 593 aa20.96■□□□□ 0.95
PSMC3-208ENST00000530887 FAM26DQ5JW98 314 aa20.96■□□□□ 0.95
PSMC3-208ENST00000530887 KRT40Q6A162 431 aa20.96■□□□□ 0.95
PSMC3-208ENST00000530887 MB21D2Q8IYB1 491 aaPredicted RBP20.96■□□□□ 0.95
PSMC3-208ENST00000530887 ZNF654Q8IZM8 581 aa20.96■□□□□ 0.95
PSMC3-208ENST00000530887 WNT8BQ93098 351 aa20.96■□□□□ 0.95
PSMC3-208ENST00000530887 MRPL38Q96DV4 380 aaKnown RBP20.96■□□□□ 0.95
PSMC3-208ENST00000530887 UBE2ZQ9H832 354 aaPredicted RBP20.96■□□□□ 0.95
PSMC3-208ENST00000530887 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.95■□□□□ 0.94
PSMC3-208ENST00000530887 SLC35G1Q2M3R5 365 aa20.95■□□□□ 0.94
PSMC3-208ENST00000530887 LEXMQ3ZCV2 418 aa20.95■□□□□ 0.94
PSMC3-208ENST00000530887 MTUS1Q9ULD2 1270 aa20.95■□□□□ 0.94
PSMC3-208ENST00000530887 HCN4Q9Y3Q4 1203 aa20.95■□□□□ 0.94
PSMC3-208ENST00000530887 CCDC69A6NI79 296 aa20.94■□□□□ 0.94
PSMC3-208ENST00000530887 PDE4AP27815 886 aa20.94■□□□□ 0.94
PSMC3-208ENST00000530887 LIFRP42702 1097 aa20.94■□□□□ 0.94
PSMC3-208ENST00000530887 FAM117BQ6P1L5 589 aa20.94■□□□□ 0.94
PSMC3-208ENST00000530887 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.94■□□□□ 0.944e-6■□□□□ 10.9
PSMC3-208ENST00000530887 NFXL1Q6ZNB6 911 aa20.94■□□□□ 0.94
PSMC3-208ENST00000530887 TMCO2Q7Z6W1 182 aaPredicted RBP20.94■□□□□ 0.94
PSMC3-208ENST00000530887 NECAB3Q96P71 396 aaPredicted RBP20.94■□□□□ 0.94
PSMC3-208ENST00000530887 IFIH1Q9BYX4 1025 aaKnown RBP20.94■□□□□ 0.94
PSMC3-208ENST00000530887 ERAP1Q9NZ08 941 aa20.94■□□□□ 0.94
PSMC3-208ENST00000530887 XIRP2A4UGR9 3374 aa20.93■□□□□ 0.94
PSMC3-208ENST00000530887 H3BNC9 293 aa20.93■□□□□ 0.94
PSMC3-208ENST00000530887 SORBS3O60504 671 aa20.93■□□□□ 0.94
PSMC3-208ENST00000530887 RB1P06400 928 aa20.93■□□□□ 0.94
PSMC3-208ENST00000530887 ADAM17P78536 824 aa20.93■□□□□ 0.94
PSMC3-208ENST00000530887 ARHGAP4P98171 946 aa20.93■□□□□ 0.94
PSMC3-208ENST00000530887 HIC1Q14526 733 aa20.93■□□□□ 0.94
PSMC3-208ENST00000530887 TMEM31Q5JXX7 168 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms