RNA–Protein interactions for RNA: ENST00000530758.1

BRK1-201, Transcript of BRICK1, SCAR/WAVE actin nucleating complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRK1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRK1-201ENST00000530758 SPC25Q9HBM1 224 aa18.19■□□□□ 0.5
BRK1-201ENST00000530758 KCNMB3Q9NPA1 279 aa18.19■□□□□ 0.5
BRK1-201ENST00000530758 TBC1D22BQ9NU19 505 aa18.19■□□□□ 0.5
BRK1-201ENST00000530758 DDX25Q9UHL0 483 aaKnown RBP18.19■□□□□ 0.5
BRK1-201ENST00000530758 NOL7Q9UMY1 257 aaKnown RBP18.19■□□□□ 0.5
BRK1-201ENST00000530758 MYH15Q9Y2K3 1946 aa18.18■□□□□ 0.5
BRK1-201ENST00000530758 IPO5O00410 1097 aaKnown RBP18.18■□□□□ 0.5
BRK1-201ENST00000530758 FARP2O94887 1054 aaPredicted RBP18.18■□□□□ 0.5
BRK1-201ENST00000530758 GGPS1O95749 300 aa18.18■□□□□ 0.5
BRK1-201ENST00000530758 HOXD8P13378 290 aaPredicted RBP18.18■□□□□ 0.5
BRK1-201ENST00000530758 MNX1P50219 401 aaPredicted RBP18.18■□□□□ 0.5
BRK1-201ENST00000530758 ITGB3BPQ13352 177 aaPredicted RBP18.18■□□□□ 0.5
BRK1-201ENST00000530758 LRRC41Q15345 812 aa18.18■□□□□ 0.5
BRK1-201ENST00000530758 PRPF38BQ5VTL8 546 aaKnown RBP18.18■□□□□ 0.5
BRK1-201ENST00000530758 RNF180Q86T96 592 aa18.18■□□□□ 0.5
BRK1-201ENST00000530758 OR6J1Q8NGC5 347 aa18.18■□□□□ 0.5
BRK1-201ENST00000530758 FAM20AQ96MK3 541 aa18.18■□□□□ 0.5
BRK1-201ENST00000530758 RIT2Q99578 217 aa18.18■□□□□ 0.5
BRK1-201ENST00000530758 WDR81Q562E7 1941 aa18.17■□□□□ 0.5
BRK1-201ENST00000530758 SLC37A4O43826 429 aa18.17■□□□□ 0.5
BRK1-201ENST00000530758 PPFIA4O75335 1185 aa18.17■□□□□ 0.5
BRK1-201ENST00000530758 PGK1P00558 417 aa18.17■□□□□ 0.5
BRK1-201ENST00000530758 TFRCP02786 760 aaKnown RBP18.17■□□□□ 0.5
BRK1-201ENST00000530758 ZSCAN22P10073 491 aaPredicted RBP18.17■□□□□ 0.5
BRK1-201ENST00000530758 PTGS1P23219 599 aa18.17■□□□□ 0.5
BRK1-201ENST00000530758 CPT1AP50416 773 aa18.17■□□□□ 0.5
BRK1-201ENST00000530758 B3GNT9Q6UX72 402 aa18.17■□□□□ 0.5
BRK1-201ENST00000530758 CYFIP1Q7L576 1253 aa18.17■□□□□ 0.5
BRK1-201ENST00000530758 C4orf32Q8N8J7 132 aa18.17■□□□□ 0.5
BRK1-201ENST00000530758 PPTC7Q8NI37 304 aa18.17■□□□□ 0.5
BRK1-201ENST00000530758 HAS1Q92839 578 aa18.17■□□□□ 0.5
BRK1-201ENST00000530758 MTMR9Q96QG7 549 aa18.17■□□□□ 0.5
BRK1-201ENST00000530758 ZNF577Q9BSK1 485 aa18.17■□□□□ 0.5
BRK1-201ENST00000530758 MLXIPQ9HAP2 919 aa18.17■□□□□ 0.5
BRK1-201ENST00000530758 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.17■□□□□ 0.5
BRK1-201ENST00000530758 DNM1LO00429 736 aa18.16■□□□□ 0.5
BRK1-201ENST00000530758 PSMD10O75832 226 aa18.16■□□□□ 0.5
BRK1-201ENST00000530758 ATG7O95352 703 aa18.16■□□□□ 0.5
BRK1-201ENST00000530758 BRD1O95696 1058 aa18.16■□□□□ 0.5
BRK1-201ENST00000530758 C6orf222P0C671 652 aaPredicted RBP18.16■□□□□ 0.5
BRK1-201ENST00000530758 FSCN1Q16658 493 aaKnown RBP18.16■□□□□ 0.5
BRK1-201ENST00000530758 HSDL1Q3SXM5 330 aa18.16■□□□□ 0.5
BRK1-201ENST00000530758 TTC38Q5R3I4 469 aa18.16■□□□□ 0.5
BRK1-201ENST00000530758 PCSK9Q8NBP7 692 aaKnown RBP18.16■□□□□ 0.5
BRK1-201ENST00000530758 SDF4Q9BRK5 362 aa18.16■□□□□ 0.5
BRK1-201ENST00000530758 MYADML2A6NDP7 307 aa18.15■□□□□ 0.5
BRK1-201ENST00000530758 MOXD2PA6NHM9 499 aa18.15■□□□□ 0.5
BRK1-201ENST00000530758 KPNA6O60684 536 aa18.15■□□□□ 0.5
BRK1-201ENST00000530758 PKP1Q13835 747 aa18.15■□□□□ 0.5
BRK1-201ENST00000530758 BRDTQ58F21 947 aaPredicted RBP18.15■□□□□ 0.5
BRK1-201ENST00000530758 GNASQ5JWF2 1037 aa18.15■□□□□ 0.5
BRK1-201ENST00000530758 FERMT3Q86UX7 667 aa18.15■□□□□ 0.5
BRK1-201ENST00000530758 POTEDQ86YR6 584 aa18.15■□□□□ 0.5
BRK1-201ENST00000530758 SLFN12Q8IYM2 578 aa18.15■□□□□ 0.5
BRK1-201ENST00000530758 AFG1LQ8WV93 481 aa18.15■□□□□ 0.5
BRK1-201ENST00000530758 SPATA33Q96N06 139 aa18.15■□□□□ 0.5
BRK1-201ENST00000530758 GPR20Q99678 358 aa18.15■□□□□ 0.5
BRK1-201ENST00000530758 JPH1Q9HDC5 661 aaPredicted RBP18.15■□□□□ 0.5
BRK1-201ENST00000530758 SLC9A2Q9UBY0 812 aa18.15■□□□□ 0.5
BRK1-201ENST00000530758 ZDHHC9Q9Y397 364 aa18.15■□□□□ 0.5
BRK1-201ENST00000530758 PCDHB6Q9Y5E3 794 aa18.15■□□□□ 0.5
BRK1-201ENST00000530758 ALPK3Q96L96 1907 aa18.14■□□□□ 0.49
BRK1-201ENST00000530758 ZEB2O60315 1214 aa18.14■□□□□ 0.49
BRK1-201ENST00000530758 NEMFO60524 1076 aa18.14■□□□□ 0.49
BRK1-201ENST00000530758 BAG4O95429 457 aaKnown RBP18.14■□□□□ 0.49
BRK1-201ENST00000530758 F13A1P00488 732 aa18.14■□□□□ 0.49
BRK1-201ENST00000530758 MMP3P08254 477 aa18.14■□□□□ 0.49
BRK1-201ENST00000530758 COL6A1P12109 1028 aa18.14■□□□□ 0.49
BRK1-201ENST00000530758 IRX5P78411 483 aaPredicted RBP18.14■□□□□ 0.49
BRK1-201ENST00000530758 ZNF174Q15697 407 aa18.14■□□□□ 0.49
BRK1-201ENST00000530758 KCNA10Q16322 511 aa18.14■□□□□ 0.49
BRK1-201ENST00000530758 ZNF746Q6NUN9 644 aaPredicted RBP18.14■□□□□ 0.49
BRK1-201ENST00000530758 PHF24Q9UPV7 400 aa18.14■□□□□ 0.49
BRK1-201ENST00000530758 IGKV6D-21A0A0A0MT36 114 aa18.13■□□□□ 0.49
BRK1-201ENST00000530758 GSTTP1A0A1W2PQM5 241 aa18.13■□□□□ 0.49
BRK1-201ENST00000530758 LAD1O00515 517 aa18.13■□□□□ 0.49
BRK1-201ENST00000530758 ATP2B1P20020 1258 aa18.13■□□□□ 0.49
BRK1-201ENST00000530758 MCM7P33993 719 aa18.13■□□□□ 0.49
BRK1-201ENST00000530758 BEX3Q00994 111 aa18.13■□□□□ 0.49
BRK1-201ENST00000530758 KRT76Q01546 638 aa18.13■□□□□ 0.49
BRK1-201ENST00000530758 CALCRLQ16602 461 aa18.13■□□□□ 0.49
BRK1-201ENST00000530758 DGKDQ16760 1214 aa18.13■□□□□ 0.49
BRK1-201ENST00000530758 SMAP1Q8IYB5 467 aaPredicted RBP18.13■□□□□ 0.49
BRK1-201ENST00000530758 SEPT1Q8WYJ6 367 aa18.13■□□□□ 0.49
BRK1-201ENST00000530758 TEKT3Q9BXF9 490 aa18.13■□□□□ 0.49
BRK1-201ENST00000530758 TMEM60Q9H2L4 133 aa18.13■□□□□ 0.49
BRK1-201ENST00000530758 POLR3EQ9NVU0 708 aa18.13■□□□□ 0.49
BRK1-201ENST00000530758 MORC2Q9Y6X9 1032 aaPredicted RBP18.13■□□□□ 0.49
BRK1-201ENST00000530758 CEP290O15078 2479 aa18.13■□□□□ 0.49
BRK1-201ENST00000530758 SCN10AQ9Y5Y9 1956 aa18.13■□□□□ 0.49
BRK1-201ENST00000530758 CABYRO75952 493 aa18.12■□□□□ 0.49
BRK1-201ENST00000530758 CCNE2O96020 404 aa18.12■□□□□ 0.49
BRK1-201ENST00000530758 ASGR1P07306 291 aa18.12■□□□□ 0.49
BRK1-201ENST00000530758 ACLYP53396 1101 aa18.12■□□□□ 0.49
BRK1-201ENST00000530758 PURAQ00577 322 aaKnown RBP18.12■□□□□ 0.49
BRK1-201ENST00000530758 SPIRE1Q08AE8 756 aa18.12■□□□□ 0.49
BRK1-201ENST00000530758 PPP2R5CQ13362 524 aa18.12■□□□□ 0.49
BRK1-201ENST00000530758 NBR1Q14596 966 aa18.12■□□□□ 0.49
BRK1-201ENST00000530758 LRCH2Q5VUJ6 765 aa18.12■□□□□ 0.49
BRK1-201ENST00000530758 ABHD15Q6UXT9 468 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms