RNA–Protein interactions for RNA: ENST00000530404.5

TSPAN4-219, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-219ENST00000530404 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.98■■□□□ 1.43
TSPAN4-219ENST00000530404 ATP6V0A1Q93050 837 aa23.98■■□□□ 1.43
TSPAN4-219ENST00000530404 RBM8AQ9Y5S9 174 aaKnown RBP23.98■■□□□ 1.43
TSPAN4-219ENST00000530404 C17orf102A2RUQ5 167 aa23.97■■□□□ 1.43
TSPAN4-219ENST00000530404 H3BRB1 525 aa23.97■■□□□ 1.43
TSPAN4-219ENST00000530404 LGR5O75473 907 aa23.97■■□□□ 1.43
TSPAN4-219ENST00000530404 GJB5O95377 273 aa23.97■■□□□ 1.43
TSPAN4-219ENST00000530404 SMIM10L2AP0DMW4 78 aa23.97■■□□□ 1.43
TSPAN4-219ENST00000530404 SMIM10L2BP0DMW5 78 aa23.97■■□□□ 1.43
TSPAN4-219ENST00000530404 FRMPD4Q14CM0 1322 aa23.97■■□□□ 1.43
TSPAN4-219ENST00000530404 RALGAPA2Q2PPJ7 1873 aa23.97■■□□□ 1.43
TSPAN4-219ENST00000530404 CYFIP1Q7L576 1253 aa23.97■■□□□ 1.43
TSPAN4-219ENST00000530404 SERINC5Q86VE9 423 aa23.97■■□□□ 1.43
TSPAN4-219ENST00000530404 TUT1Q9H6E5 874 aaKnown RBP23.97■■□□□ 1.43
TSPAN4-219ENST00000530404 NOP56O00567 594 aaKnown RBP23.96■■□□□ 1.43
TSPAN4-219ENST00000530404 TREHO43280 583 aa23.96■■□□□ 1.43
TSPAN4-219ENST00000530404 COL9A3Q14050 684 aaPredicted RBP23.96■■□□□ 1.43
TSPAN4-219ENST00000530404 USP17L6PQ6QN14 398 aa23.96■■□□□ 1.43
TSPAN4-219ENST00000530404 ZNF654Q8IZM8 581 aa23.96■■□□□ 1.43
TSPAN4-219ENST00000530404 DBF4BQ8NFT6 615 aa23.96■■□□□ 1.43
TSPAN4-219ENST00000530404 MAP4K1Q92918 833 aa23.96■■□□□ 1.43
TSPAN4-219ENST00000530404 RAD9AQ99638 391 aa23.96■■□□□ 1.43
TSPAN4-219ENST00000530404 OSBPL7Q9BZF2 842 aa23.96■■□□□ 1.43
TSPAN4-219ENST00000530404 LY9Q9HBG7 655 aa23.96■■□□□ 1.43
TSPAN4-219ENST00000530404 RAPGEFL1Q9UHV5 662 aa23.96■■□□□ 1.43
TSPAN4-219ENST00000530404 RSPH10B2B2RC85 870 aa23.95■■□□□ 1.42
TSPAN4-219ENST00000530404 RSPH10BP0C881 870 aa23.95■■□□□ 1.42
TSPAN4-219ENST00000530404 SP4Q02446 784 aa23.95■■□□□ 1.42
TSPAN4-219ENST00000530404 GNPTABQ3T906 1256 aa23.95■■□□□ 1.42
TSPAN4-219ENST00000530404 TRIM50Q86XT4 487 aa23.95■■□□□ 1.42
TSPAN4-219ENST00000530404 INPP4AQ96PE3 977 aaPredicted RBP23.95■■□□□ 1.42
TSPAN4-219ENST00000530404 RNPEPQ9H4A4 650 aa23.95■■□□□ 1.42
TSPAN4-219ENST00000530404 LINC01553A4QN01 128 aa23.94■■□□□ 1.42
TSPAN4-219ENST00000530404 CTSHP09668 335 aa23.94■■□□□ 1.42
TSPAN4-219ENST00000530404 RXRAP19793 462 aa23.94■■□□□ 1.42
TSPAN4-219ENST00000530404 COL9A1P20849 921 aa23.94■■□□□ 1.42
TSPAN4-219ENST00000530404 ICAM3P32942 547 aa23.94■■□□□ 1.42
TSPAN4-219ENST00000530404 AAK1Q2M2I8 961 aa23.94■■□□□ 1.42
TSPAN4-219ENST00000530404 UTP14CQ5TAP6 766 aaKnown RBP23.94■■□□□ 1.42
TSPAN4-219ENST00000530404 RAB11FIP4Q86YS3 637 aa23.94■■□□□ 1.42
TSPAN4-219ENST00000530404 MYOCDQ8IZQ8 938 aa23.94■■□□□ 1.42
TSPAN4-219ENST00000530404 CMTR1Q8N1G2 835 aaKnown RBP23.94■■□□□ 1.42
TSPAN4-219ENST00000530404 SMARCC2Q8TAQ2 1214 aa23.94■■□□□ 1.42
TSPAN4-219ENST00000530404 GPR20Q99678 358 aa23.94■■□□□ 1.42
TSPAN4-219ENST00000530404 SUGCTQ9HAC7 445 aa23.94■■□□□ 1.42
TSPAN4-219ENST00000530404 SPATA31C2B4DYI2 1134 aa23.93■■□□□ 1.42
TSPAN4-219ENST00000530404 EFCAB14O75071 495 aa23.93■■□□□ 1.42
TSPAN4-219ENST00000530404 PLEKHA8P1O95397 391 aa23.93■■□□□ 1.42
TSPAN4-219ENST00000530404 HOXC8P31273 242 aa23.93■■□□□ 1.42
TSPAN4-219ENST00000530404 METTL7BQ6UX53 244 aa23.93■■□□□ 1.42
TSPAN4-219ENST00000530404 CTCFLQ8NI51 663 aaPredicted RBP23.93■■□□□ 1.42
TSPAN4-219ENST00000530404 RRP36Q96EU6 259 aaKnown RBP23.93■■□□□ 1.42
TSPAN4-219ENST00000530404 TGS1Q96RS0 853 aaKnown RBP23.93■■□□□ 1.42
TSPAN4-219ENST00000530404 SPZ1Q9BXG8 430 aa23.93■■□□□ 1.42
TSPAN4-219ENST00000530404 SETD4Q9NVD3 440 aa23.93■■□□□ 1.42
TSPAN4-219ENST00000530404 EMSYQ7Z589 1322 aa23.92■■□□□ 1.42
TSPAN4-219ENST00000530404 MEIS2O14770 477 aa23.92■■□□□ 1.42
TSPAN4-219ENST00000530404 FIBPO43427 364 aa23.92■■□□□ 1.42
TSPAN4-219ENST00000530404 PRC1O43663 620 aa23.92■■□□□ 1.42
TSPAN4-219ENST00000530404 ERVK-21P61565 698 aa23.92■■□□□ 1.42
TSPAN4-219ENST00000530404 NEDD9Q14511 834 aa23.92■■□□□ 1.42
TSPAN4-219ENST00000530404 CASC1Q6TDU7 716 aa23.92■■□□□ 1.42
TSPAN4-219ENST00000530404 COG5Q9UP83 839 aa23.92■■□□□ 1.42
TSPAN4-219ENST00000530404 STAM2O75886 525 aa23.91■■□□□ 1.42
TSPAN4-219ENST00000530404 DDAH1O94760 285 aa23.91■■□□□ 1.42
TSPAN4-219ENST00000530404 MKRN4PQ13434 485 aaPredicted RBP23.91■■□□□ 1.42
TSPAN4-219ENST00000530404 PLEKHG4Q58EX7 1191 aa23.91■■□□□ 1.42
TSPAN4-219ENST00000530404 NFXL1Q6ZNB6 911 aa23.91■■□□□ 1.42
TSPAN4-219ENST00000530404 SRBD1Q8N5C6 995 aaKnown RBP23.91■■□□□ 1.42
TSPAN4-219ENST00000530404 CUL5Q93034 780 aa23.91■■□□□ 1.42
TSPAN4-219ENST00000530404 HLA-CQ95604 372 aa23.91■■□□□ 1.42
TSPAN4-219ENST00000530404 C17orf80Q9BSJ5 609 aa23.91■■□□□ 1.42
TSPAN4-219ENST00000530404 USP26Q9BXU7 913 aa23.91■■□□□ 1.42
TSPAN4-219ENST00000530404 MYO7AQ13402 2215 aa23.91■■□□□ 1.42
TSPAN4-219ENST00000530404 KIAA1671Q9BY89 1806 aa23.9■■□□□ 1.42
TSPAN4-219ENST00000530404 hCG_1642624A0A1W2PR95 340 aa23.9■■□□□ 1.42
TSPAN4-219ENST00000530404 AMHP03971 560 aa23.9■■□□□ 1.42
TSPAN4-219ENST00000530404 PCNX4Q63HM2 1172 aa23.9■■□□□ 1.42
TSPAN4-219ENST00000530404 SEC63Q9UGP8 760 aaKnown RBP23.9■■□□□ 1.42
TSPAN4-219ENST00000530404 SH2B2O14492 632 aaPredicted RBP23.89■■□□□ 1.41
TSPAN4-219ENST00000530404 KIF5BP33176 963 aa23.89■■□□□ 1.41
TSPAN4-219ENST00000530404 MAP3K14Q99558 947 aa23.89■■□□□ 1.41
TSPAN4-219ENST00000530404 LRRC2Q9BYS8 371 aa23.89■■□□□ 1.41
TSPAN4-219ENST00000530404 LSG1Q9H089 658 aaKnown RBP23.89■■□□□ 1.41
TSPAN4-219ENST00000530404 INSL6Q9Y581 213 aa23.89■■□□□ 1.41
TSPAN4-219ENST00000530404 CCDC69A6NI79 296 aa23.88■■□□□ 1.41
TSPAN4-219ENST00000530404 UPP2O95045 317 aa23.88■■□□□ 1.41
TSPAN4-219ENST00000530404 ARHGAP4P98171 946 aa23.88■■□□□ 1.41
TSPAN4-219ENST00000530404 UBE2SQ16763 222 aa23.88■■□□□ 1.41
TSPAN4-219ENST00000530404 CCDC82Q8N4S0 544 aa23.88■■□□□ 1.41
TSPAN4-219ENST00000530404 EVPLQ92817 2033 aa23.88■■□□□ 1.41
TSPAN4-219ENST00000530404 PIK3CDO00329 1044 aa23.87■■□□□ 1.41
TSPAN4-219ENST00000530404 SLC27A2O14975 620 aa23.87■■□□□ 1.41
TSPAN4-219ENST00000530404 ATP9AO75110 1047 aa23.87■■□□□ 1.41
TSPAN4-219ENST00000530404 MCM5P33992 734 aa23.87■■□□□ 1.41
TSPAN4-219ENST00000530404 FBXO22Q8NEZ5 403 aa23.87■■□□□ 1.41
TSPAN4-219ENST00000530404 LMBR1Q8WVP7 490 aa23.87■■□□□ 1.41
TSPAN4-219ENST00000530404 SEPT8Q92599 483 aa23.87■■□□□ 1.41
TSPAN4-219ENST00000530404 LMCD1Q9NZU5 365 aa23.87■■□□□ 1.41
TSPAN4-219ENST00000530404 PKD2L1Q9P0L9 805 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms