RNA–Protein interactions for RNA: ENST00000530068.5

CTNND1-224, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-224ENST00000530068 KRT23Q9C075 422 aa12.9□□□□□ -0.34
CTNND1-224ENST00000530068 TUT1Q9H6E5 874 aaKnown RBP12.9□□□□□ -0.34
CTNND1-224ENST00000530068 CNNM2Q9H8M5 875 aa12.9□□□□□ -0.34
CTNND1-224ENST00000530068 TRIP12Q14669 1992 aaPredicted RBP12.9□□□□□ -0.34
CTNND1-224ENST00000530068 NEDD4P46934 1319 aa12.89□□□□□ -0.35
CTNND1-224ENST00000530068 C19orf67A6NJJ6 358 aa12.89□□□□□ -0.35
CTNND1-224ENST00000530068 NOP56O00567 594 aaKnown RBP12.89□□□□□ -0.35
CTNND1-224ENST00000530068 STAM2O75886 525 aa12.89□□□□□ -0.35
CTNND1-224ENST00000530068 SMIM10L2AP0DMW4 78 aa12.89□□□□□ -0.35
CTNND1-224ENST00000530068 SMIM10L2BP0DMW5 78 aa12.89□□□□□ -0.35
CTNND1-224ENST00000530068 HOXC8P31273 242 aa12.89□□□□□ -0.35
CTNND1-224ENST00000530068 MRE11P49959 708 aa12.89□□□□□ -0.35
CTNND1-224ENST00000530068 ZP2Q05996 745 aa12.89□□□□□ -0.35
CTNND1-224ENST00000530068 FIBCD1Q8N539 461 aa12.89□□□□□ -0.35
CTNND1-224ENST00000530068 ENAHQ8N8S7 591 aaPredicted RBP12.89□□□□□ -0.35
CTNND1-224ENST00000530068 RILPL2Q969X0 211 aa12.89□□□□□ -0.35
CTNND1-224ENST00000530068 IL17RAQ96F46 866 aa12.89□□□□□ -0.35
CTNND1-224ENST00000530068 C11orf84Q9BUA3 381 aaPredicted RBP12.89□□□□□ -0.35
CTNND1-224ENST00000530068 CLDND1Q9NY35 253 aa12.89□□□□□ -0.35
CTNND1-224ENST00000530068 PCDHA1Q9Y5I3 950 aa12.89□□□□□ -0.35
CTNND1-224ENST00000530068 KLRF2D3W0D1 207 aa12.88□□□□□ -0.35
CTNND1-224ENST00000530068 GCOM1H8Y6P7 765 aaPredicted RBP12.88□□□□□ -0.35
CTNND1-224ENST00000530068 HIP1O00291 1037 aa12.88□□□□□ -0.35
CTNND1-224ENST00000530068 ZBTB5O15062 677 aa12.88□□□□□ -0.35
CTNND1-224ENST00000530068 RGS20O76081 388 aa12.88□□□□□ -0.35
CTNND1-224ENST00000530068 UPP2O95045 317 aa12.88□□□□□ -0.35
CTNND1-224ENST00000530068 POLR2MP0CAP2 368 aa12.88□□□□□ -0.35
CTNND1-224ENST00000530068 UBA1P22314 1058 aaKnown RBP12.88□□□□□ -0.35
CTNND1-224ENST00000530068 NEDD9Q14511 834 aa12.88□□□□□ -0.35
CTNND1-224ENST00000530068 PGM5Q15124 567 aa12.88□□□□□ -0.35
CTNND1-224ENST00000530068 IMMTQ16891 758 aaKnown RBP12.88□□□□□ -0.35
CTNND1-224ENST00000530068 IFIT1BQ5T764 474 aaKnown RBP12.88□□□□□ -0.35
CTNND1-224ENST00000530068 PPP2R3CQ969Q6 453 aa12.88□□□□□ -0.35
CTNND1-224ENST00000530068 RNPEPQ9H4A4 650 aa12.88□□□□□ -0.35
CTNND1-224ENST00000530068 ZSWIM5Q9P217 1185 aa12.88□□□□□ -0.35
CTNND1-224ENST00000530068 ZNF215Q9UL58 517 aaPredicted RBP12.88□□□□□ -0.35
CTNND1-224ENST00000530068 COL4A4P53420 1690 aaPredicted RBP12.87□□□□□ -0.35
CTNND1-224ENST00000530068 B4E1Z4 1266 aa12.87□□□□□ -0.35
CTNND1-224ENST00000530068 C5orf67F2Z3F1 127 aa12.87□□□□□ -0.35
CTNND1-224ENST00000530068 TREHO43280 583 aa12.87□□□□□ -0.35
CTNND1-224ENST00000530068 LGALS2P05162 132 aa12.87□□□□□ -0.35
CTNND1-224ENST00000530068 SDSP20132 328 aa12.87□□□□□ -0.35
CTNND1-224ENST00000530068 CTNNB1P35222 781 aa12.87□□□□□ -0.35
CTNND1-224ENST00000530068 BMPR1AP36894 532 aa12.87□□□□□ -0.35
CTNND1-224ENST00000530068 NHLH1Q02575 133 aa12.87□□□□□ -0.35
CTNND1-224ENST00000530068 HDAC1Q13547 482 aaPredicted RBP12.87□□□□□ -0.35
CTNND1-224ENST00000530068 HIC1Q14526 733 aa12.87□□□□□ -0.35
CTNND1-224ENST00000530068 FAM26DQ5JW98 314 aa12.87□□□□□ -0.35
CTNND1-224ENST00000530068 RPAINQ86UA6 219 aa12.87□□□□□ -0.35
CTNND1-224ENST00000530068 POTEDQ86YR6 584 aa12.87□□□□□ -0.35
CTNND1-224ENST00000530068 MTMR8Q96EF0 704 aa12.87□□□□□ -0.35
CTNND1-224ENST00000530068 DIAPH3Q9NSV4 1193 aa12.87□□□□□ -0.35
CTNND1-224ENST00000530068 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.86□□□□□ -0.35
CTNND1-224ENST00000530068 OPLAHO14841 1288 aa12.86□□□□□ -0.35
CTNND1-224ENST00000530068 CTSHP09668 335 aa12.86□□□□□ -0.35
CTNND1-224ENST00000530068 ICAM3P32942 547 aa12.86□□□□□ -0.35
CTNND1-224ENST00000530068 SP2Q02086 613 aa12.86□□□□□ -0.35
CTNND1-224ENST00000530068 SMAD2Q15796 467 aaKnown RBP12.86□□□□□ -0.35
CTNND1-224ENST00000530068 PKN1Q16512 942 aa12.86□□□□□ -0.35
CTNND1-224ENST00000530068 METTL7BQ6UX53 244 aa12.86□□□□□ -0.35
CTNND1-224ENST00000530068 RSPH3Q86UC2 560 aa12.86□□□□□ -0.35
CTNND1-224ENST00000530068 FBXL18Q96ME1 805 aa12.86□□□□□ -0.35
CTNND1-224ENST00000530068 DSCC1Q9BVC3 393 aa12.86□□□□□ -0.35
CTNND1-224ENST00000530068 FIBPO43427 364 aa12.85□□□□□ -0.35
CTNND1-224ENST00000530068 SORBS3O60504 671 aa12.85□□□□□ -0.35
CTNND1-224ENST00000530068 RPLP2P05387 115 aaKnown RBP12.85□□□□□ -0.35
CTNND1-224ENST00000530068 HOXA13P31271 388 aaPredicted RBP12.85□□□□□ -0.35
CTNND1-224ENST00000530068 SMAD4Q13485 552 aaKnown RBP12.85□□□□□ -0.35
CTNND1-224ENST00000530068 CTC1Q2NKJ3 1217 aa12.85□□□□□ -0.35
CTNND1-224ENST00000530068 HERC4Q5GLZ8 1057 aaPredicted RBP12.85□□□□□ -0.35
CTNND1-224ENST00000530068 TAF2Q6P1X5 1199 aa12.85□□□□□ -0.35
CTNND1-224ENST00000530068 XRRA1Q6P2D8 792 aa12.85□□□□□ -0.35
CTNND1-224ENST00000530068 FCHSD1Q86WN1 690 aa12.85□□□□□ -0.35
CTNND1-224ENST00000530068 GIMAP8Q8ND71 665 aaPredicted RBP12.85□□□□□ -0.35
CTNND1-224ENST00000530068 INPP4AQ96PE3 977 aaPredicted RBP12.85□□□□□ -0.35
CTNND1-224ENST00000530068 PRRX2Q99811 253 aa12.85□□□□□ -0.35
CTNND1-224ENST00000530068 PLVAPQ9BX97 442 aa12.85□□□□□ -0.35
CTNND1-224ENST00000530068 SETD4Q9NVD3 440 aa12.85□□□□□ -0.35
CTNND1-224ENST00000530068 COL4A6Q14031 1691 aa12.85□□□□□ -0.35
CTNND1-224ENST00000530068 NRCAMQ92823 1304 aa12.85□□□□□ -0.35
CTNND1-224ENST00000530068 SIP14410 1827 aa12.84□□□□□ -0.35
CTNND1-224ENST00000530068 SPATA31C2B4DYI2 1134 aa12.84□□□□□ -0.35
CTNND1-224ENST00000530068 IRS1P35568 1242 aa12.84□□□□□ -0.35
CTNND1-224ENST00000530068 ARHGAP4P98171 946 aa12.84□□□□□ -0.35
CTNND1-224ENST00000530068 TRDNQ13061 729 aa12.84□□□□□ -0.35
CTNND1-224ENST00000530068 NAALADL2Q58DX5 795 aa12.84□□□□□ -0.35
CTNND1-224ENST00000530068 CYFIP1Q7L576 1253 aa12.84□□□□□ -0.35
CTNND1-224ENST00000530068 STAG2Q8N3U4 1231 aa12.84□□□□□ -0.35
CTNND1-224ENST00000530068 IL31RAQ8NI17 732 aa12.84□□□□□ -0.35
CTNND1-224ENST00000530068 CLP1Q92989 425 aaKnown RBP12.84□□□□□ -0.35
CTNND1-224ENST00000530068 SENP7Q9BQF6 1050 aa12.84□□□□□ -0.35
CTNND1-224ENST00000530068 MAD2L2Q9UI95 211 aa12.84□□□□□ -0.35
CTNND1-224ENST00000530068 ADGRA3Q8IWK6 1321 aa12.84□□□□□ -0.35
CTNND1-224ENST00000530068 PTPRSQ13332 1948 aa12.84□□□□□ -0.35
CTNND1-224ENST00000530068 MYO7AQ13402 2215 aa12.83□□□□□ -0.36
CTNND1-224ENST00000530068 PNMA6FA0A0J9YX94 578 aa12.83□□□□□ -0.36
CTNND1-224ENST00000530068 PALM3A6NDB9 673 aaPredicted RBP12.83□□□□□ -0.36
CTNND1-224ENST00000530068 MBTPS2O43462 519 aa12.83□□□□□ -0.36
CTNND1-224ENST00000530068 PPP1R11O60927 126 aaPredicted RBP12.83□□□□□ -0.36
CTNND1-224ENST00000530068 LTBRP36941 435 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms