RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 PFKFB1P16118 471 aa27.87■■■□□ 2.05
LDLRAD3-203ENST00000528989 PTGS1P23219 599 aa27.87■■■□□ 2.05
LDLRAD3-203ENST00000528989 PDIA5Q14554 519 aa27.87■■■□□ 2.05
LDLRAD3-203ENST00000528989 LY6KQ17RY6 165 aa27.87■■■□□ 2.05
LDLRAD3-203ENST00000528989 EML1O00423 815 aa27.86■■■□□ 2.05
LDLRAD3-203ENST00000528989 NR1I2O75469 434 aa27.86■■■□□ 2.05
LDLRAD3-203ENST00000528989 ICAM3P32942 547 aa27.86■■■□□ 2.05
LDLRAD3-203ENST00000528989 RIT2Q99578 217 aa27.86■■■□□ 2.05
LDLRAD3-203ENST00000528989 A0A087X0B3 334 aa27.85■■■□□ 2.05
LDLRAD3-203ENST00000528989 SNW1Q13573 536 aaKnown RBP27.85■■■□□ 2.05
LDLRAD3-203ENST00000528989 NCAPH2Q6IBW4 605 aa27.85■■■□□ 2.05
LDLRAD3-203ENST00000528989 TAPT1Q6NXT6 567 aa27.85■■■□□ 2.05
LDLRAD3-203ENST00000528989 CDHR1Q96JP9 859 aa27.85■■■□□ 2.05
LDLRAD3-203ENST00000528989 MMTAG2Q9BU76 263 aaKnown RBP27.85■■■□□ 2.05
LDLRAD3-203ENST00000528989 UNC45AQ9H3U1 944 aa27.85■■■□□ 2.05
LDLRAD3-203ENST00000528989 SYNGAP1Q96PV0 1343 aa27.85■■■□□ 2.05
LDLRAD3-203ENST00000528989 PDILTQ8N807 584 aa27.85■■■□□ 2.05
LDLRAD3-203ENST00000528989 HPSEQ9Y251 543 aa27.85■■■□□ 2.05
LDLRAD3-203ENST00000528989 LRRC37A2A6NM11 1700 aa27.84■■■□□ 2.05
LDLRAD3-203ENST00000528989 TRAK2O60296 914 aa27.84■■■□□ 2.05
LDLRAD3-203ENST00000528989 ZRSR1Q15695 479 aaKnown RBP27.84■■■□□ 2.05
LDLRAD3-203ENST00000528989 ENGASEQ8NFI3 743 aa27.84■■■□□ 2.05
LDLRAD3-203ENST00000528989 TEKT3Q9BXF9 490 aa27.84■■■□□ 2.05
LDLRAD3-203ENST00000528989 TBC1D22BQ9NU19 505 aa27.84■■■□□ 2.05
LDLRAD3-203ENST00000528989 KCNH3Q9ULD8 1083 aa27.84■■■□□ 2.05
LDLRAD3-203ENST00000528989 IGHA2P01877 340 aa27.83■■■□□ 2.05
LDLRAD3-203ENST00000528989 XRCC5P13010 732 aaKnown RBP27.83■■■□□ 2.05
LDLRAD3-203ENST00000528989 UBA1P22314 1058 aaKnown RBP27.83■■■□□ 2.05
LDLRAD3-203ENST00000528989 B3GNT9Q6UX72 402 aa27.83■■■□□ 2.05
LDLRAD3-203ENST00000528989 CYFIP1Q7L576 1253 aa27.83■■■□□ 2.05
LDLRAD3-203ENST00000528989 AK8Q96MA6 479 aa27.83■■■□□ 2.05
LDLRAD3-203ENST00000528989 PLIN2Q99541 437 aa27.83■■■□□ 2.05
LDLRAD3-203ENST00000528989 SRRDQ9UH36 339 aa27.83■■■□□ 2.05
LDLRAD3-203ENST00000528989 DDX41Q9UJV9 622 aaKnown RBP27.83■■■□□ 2.05
LDLRAD3-203ENST00000528989 KIAA1217Q5T5P2 1943 aa27.83■■■□□ 2.05
LDLRAD3-203ENST00000528989 PPP2R5CQ13362 524 aa27.83■■■□□ 2.04
LDLRAD3-203ENST00000528989 ACVR2BQ13705 512 aa27.83■■■□□ 2.04
LDLRAD3-203ENST00000528989 KARSQ15046 597 aaKnown RBP27.83■■■□□ 2.04
LDLRAD3-203ENST00000528989 OLFML2BQ68BL8 750 aa27.83■■■□□ 2.04
LDLRAD3-203ENST00000528989 MSL3Q8N5Y2 521 aaKnown RBP27.83■■■□□ 2.04
LDLRAD3-203ENST00000528989 TRIB2Q92519 343 aa27.83■■■□□ 2.04
LDLRAD3-203ENST00000528989 RAB34Q9BZG1 259 aa27.83■■■□□ 2.04
LDLRAD3-203ENST00000528989 DACT1Q9NYF0 836 aa27.83■■■□□ 2.04
LDLRAD3-203ENST00000528989 CCNE2O96020 404 aa27.82■■■□□ 2.04
LDLRAD3-203ENST00000528989 UBA7P41226 1012 aa27.82■■■□□ 2.04
LDLRAD3-203ENST00000528989 SP4Q02446 784 aa27.82■■■□□ 2.04
LDLRAD3-203ENST00000528989 CCDC62Q6P9F0 684 aa27.82■■■□□ 2.04
LDLRAD3-203ENST00000528989 FMR1NBQ8N0W7 255 aaPredicted RBP27.82■■■□□ 2.04
LDLRAD3-203ENST00000528989 COPS5Q92905 334 aa27.82■■■□□ 2.04
LDLRAD3-203ENST00000528989 ERO1AQ96HE7 468 aa27.82■■■□□ 2.04
LDLRAD3-203ENST00000528989 ABHD16BQ9H3Z7 469 aa27.82■■■□□ 2.04
LDLRAD3-203ENST00000528989 VTA1Q9NP79 307 aa27.82■■■□□ 2.04
LDLRAD3-203ENST00000528989 FAM13BQ9NYF5 915 aa27.82■■■□□ 2.04
LDLRAD3-203ENST00000528989 ZHX1Q9UKY1 873 aaPredicted RBP27.82■■■□□ 2.04
LDLRAD3-203ENST00000528989 BRCA2P51587 3418 aa27.82■■■□□ 2.04
LDLRAD3-203ENST00000528989 FAM237AA0A1B0GTK4 181 aa27.81■■■□□ 2.04
LDLRAD3-203ENST00000528989 C11orf97A0A1B0GVM6 126 aaPredicted RBP27.81■■■□□ 2.04
LDLRAD3-203ENST00000528989 POLR2DO15514 142 aaKnown RBP27.81■■■□□ 2.04
LDLRAD3-203ENST00000528989 TGFB3P10600 412 aa27.81■■■□□ 2.04
LDLRAD3-203ENST00000528989 ADCYAP1R1P41586 468 aa27.81■■■□□ 2.04
LDLRAD3-203ENST00000528989 ECM1Q16610 540 aa27.81■■■□□ 2.04
LDLRAD3-203ENST00000528989 GJC2Q5T442 439 aaPredicted RBP27.81■■■□□ 2.04
LDLRAD3-203ENST00000528989 CCDC73Q6ZRK6 1079 aa27.81■■■□□ 2.04
LDLRAD3-203ENST00000528989 TXNP10599 105 aaKnown RBP27.81■■■□□ 2.04
LDLRAD3-203ENST00000528989 PTMSP20962 102 aa27.81■■■□□ 2.04
LDLRAD3-203ENST00000528989 FAM160A1Q05DH4 1040 aa27.81■■■□□ 2.04
LDLRAD3-203ENST00000528989 CABP7Q86V35 215 aa27.81■■■□□ 2.04
LDLRAD3-203ENST00000528989 SENP7Q9BQF6 1050 aa27.81■■■□□ 2.04
LDLRAD3-203ENST00000528989 SDF4Q9BRK5 362 aa27.81■■■□□ 2.04
LDLRAD3-203ENST00000528989 ZNF202O95125 648 aa27.8■■■□□ 2.04
LDLRAD3-203ENST00000528989 MBD3O95983 291 aa27.8■■■□□ 2.04
LDLRAD3-203ENST00000528989 ELNP15502 786 aa27.8■■■□□ 2.04
LDLRAD3-203ENST00000528989 SYKP43405 635 aa27.8■■■□□ 2.04
LDLRAD3-203ENST00000528989 SNX29Q8TEQ0 813 aa27.8■■■□□ 2.04
LDLRAD3-203ENST00000528989 SCFD2Q8WU76 684 aa27.8■■■□□ 2.04
LDLRAD3-203ENST00000528989 CCSER1Q9C0I3 900 aa27.8■■■□□ 2.04
LDLRAD3-203ENST00000528989 RGL1Q9NZL6 768 aa27.8■■■□□ 2.04
LDLRAD3-203ENST00000528989 TRIM32Q13049 653 aa27.79■■■□□ 2.04
LDLRAD3-203ENST00000528989 KLHL40Q2TBA0 621 aa27.79■■■□□ 2.04
LDLRAD3-203ENST00000528989 LRRC15Q8TF66 581 aa27.79■■■□□ 2.04
LDLRAD3-203ENST00000528989 JPH1Q9HDC5 661 aaPredicted RBP27.79■■■□□ 2.04
LDLRAD3-203ENST00000528989 ADCY6O43306 1168 aa27.78■■■□□ 2.04
LDLRAD3-203ENST00000528989 GGPS1O95749 300 aa27.78■■■□□ 2.04
LDLRAD3-203ENST00000528989 ZNF865P0CJ78 1059 aaPredicted RBP27.78■■■□□ 2.04
LDLRAD3-203ENST00000528989 HOXD10P28358 340 aa27.78■■■□□ 2.04
LDLRAD3-203ENST00000528989 CYP4A11Q02928 519 aa27.78■■■□□ 2.04
LDLRAD3-203ENST00000528989 TTLL4Q14679 1199 aa27.78■■■□□ 2.04
LDLRAD3-203ENST00000528989 CCDC144BQ3MJ40 725 aa27.78■■■□□ 2.04
LDLRAD3-203ENST00000528989 LONRF3Q496Y0 759 aa27.78■■■□□ 2.04
LDLRAD3-203ENST00000528989 KRT79Q5XKE5 535 aa27.78■■■□□ 2.04
LDLRAD3-203ENST00000528989 NFASCO94856 1347 aa27.78■■■□□ 2.04
LDLRAD3-203ENST00000528989 A0A087WWV3 80 aa27.78■■■□□ 2.04
LDLRAD3-203ENST00000528989 MED24O75448 989 aa27.78■■■□□ 2.04
LDLRAD3-203ENST00000528989 DHX58Q96C10 678 aa27.78■■■□□ 2.04
LDLRAD3-203ENST00000528989 EIF2AK1Q9BQI3 630 aaKnown RBP27.78■■■□□ 2.04
LDLRAD3-203ENST00000528989 SLC9A2Q9UBY0 812 aa27.78■■■□□ 2.04
LDLRAD3-203ENST00000528989 SAMM50Q9Y512 469 aa27.78■■■□□ 2.04
LDLRAD3-203ENST00000528989 RBM47A0AV96 593 aaKnown RBP27.77■■■□□ 2.04
LDLRAD3-203ENST00000528989 FARP2O94887 1054 aaPredicted RBP27.77■■■□□ 2.04
LDLRAD3-203ENST00000528989 SPATA31C1P0DKV0 1188 aa27.77■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms