RNA–Protein interactions for RNA: ENST00000528907.5

UBXN1-209, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 861 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-209ENST00000528907 ZDHHC9Q9Y397 364 aa16.31■□□□□ 0.2
UBXN1-209ENST00000528907 HTTP42858 3142 aa16.31■□□□□ 0.2
UBXN1-209ENST00000528907 DOCK5Q9H7D0 1870 aa16.31■□□□□ 0.2
UBXN1-209ENST00000528907 SYNRGQ9UMZ2 1314 aa16.3■□□□□ 0.2
UBXN1-209ENST00000528907 POTEFA5A3E0 1075 aa16.3■□□□□ 0.2
UBXN1-209ENST00000528907 A6NJR5 290 aa16.3■□□□□ 0.2
UBXN1-209ENST00000528907 CTAGE5O15320 804 aa16.3■□□□□ 0.2
UBXN1-209ENST00000528907 NEMFO60524 1076 aa16.3■□□□□ 0.2
UBXN1-209ENST00000528907 GGPS1O95749 300 aa16.3■□□□□ 0.2
UBXN1-209ENST00000528907 HOXD8P13378 290 aaPredicted RBP16.3■□□□□ 0.2
UBXN1-209ENST00000528907 FXR1P51114 621 aaKnown RBP eCLIP16.3■□□□□ 0.2
UBXN1-209ENST00000528907 ITGB3BPQ13352 177 aaPredicted RBP16.3■□□□□ 0.2
UBXN1-209ENST00000528907 ATL3Q6DD88 541 aa16.3■□□□□ 0.2
UBXN1-209ENST00000528907 B3GNT9Q6UX72 402 aa16.3■□□□□ 0.2
UBXN1-209ENST00000528907 DHX37Q8IY37 1157 aaKnown RBP16.3■□□□□ 0.2
UBXN1-209ENST00000528907 SLFN12Q8IYM2 578 aa16.3■□□□□ 0.2
UBXN1-209ENST00000528907 C4orf32Q8N8J7 132 aa16.3■□□□□ 0.2
UBXN1-209ENST00000528907 ANKLE1Q8NAG6 615 aa16.3■□□□□ 0.2
UBXN1-209ENST00000528907 DEFB118Q96PH6 123 aa16.3■□□□□ 0.2
UBXN1-209ENST00000528907 SPC25Q9HBM1 224 aa16.3■□□□□ 0.2
UBXN1-209ENST00000528907 XPNPEP3Q9NQH7 507 aa16.3■□□□□ 0.2
UBXN1-209ENST00000528907 PSMD10O75832 226 aa16.29■□□□□ 0.2
UBXN1-209ENST00000528907 BMP15O95972 392 aa16.29■□□□□ 0.2
UBXN1-209ENST00000528907 CCSAPQ6IQ19 270 aaPredicted RBP16.29■□□□□ 0.2
UBXN1-209ENST00000528907 POTEDQ86YR6 584 aa16.29■□□□□ 0.2
UBXN1-209ENST00000528907 ARRDC4Q8NCT1 418 aa16.29■□□□□ 0.2
UBXN1-209ENST00000528907 OR6J1Q8NGC5 347 aa16.29■□□□□ 0.2
UBXN1-209ENST00000528907 PPTC7Q8NI37 304 aa16.29■□□□□ 0.2
UBXN1-209ENST00000528907 U2AF1L4Q8WU68 220 aaKnown RBP16.29■□□□□ 0.2
UBXN1-209ENST00000528907 HAS1Q92839 578 aa16.29■□□□□ 0.2
UBXN1-209ENST00000528907 COPS5Q92905 334 aa16.29■□□□□ 0.2
UBXN1-209ENST00000528907 SDF4Q9BRK5 362 aa16.29■□□□□ 0.2
UBXN1-209ENST00000528907 TSEN34Q9BSV6 310 aaKnown RBP16.29■□□□□ 0.2
UBXN1-209ENST00000528907 TMEM106CQ9BVX2 250 aa16.29■□□□□ 0.2
UBXN1-209ENST00000528907 AP5M1Q9H0R1 490 aa16.29■□□□□ 0.2
UBXN1-209ENST00000528907 PCDHB6Q9Y5E3 794 aa16.29■□□□□ 0.2
UBXN1-209ENST00000528907 DYNC1LI2O43237 492 aaPredicted RBP16.28■□□□□ 0.2
UBXN1-209ENST00000528907 ATG7O95352 703 aa16.28■□□□□ 0.2
UBXN1-209ENST00000528907 BAG4O95429 457 aaKnown RBP16.28■□□□□ 0.2
UBXN1-209ENST00000528907 MCM7P33993 719 aa16.28■□□□□ 0.2
UBXN1-209ENST00000528907 PRPHP41219 470 aa16.28■□□□□ 0.2
UBXN1-209ENST00000528907 CPT1AP50416 773 aa16.28■□□□□ 0.2
UBXN1-209ENST00000528907 KRT76Q01546 638 aa16.28■□□□□ 0.2
UBXN1-209ENST00000528907 ZNF174Q15697 407 aa16.28■□□□□ 0.2
UBXN1-209ENST00000528907 ZNF746Q6NUN9 644 aaPredicted RBP16.28■□□□□ 0.2
UBXN1-209ENST00000528907 RNF180Q86T96 592 aa16.28■□□□□ 0.2
UBXN1-209ENST00000528907 MLXIPQ9HAP2 919 aa16.28■□□□□ 0.2
UBXN1-209ENST00000528907 JPH1Q9HDC5 661 aaPredicted RBP16.28■□□□□ 0.2
UBXN1-209ENST00000528907 MKI67P46013 3256 aaKnown RBP16.28■□□□□ 0.2
UBXN1-209ENST00000528907 DNM1LO00429 736 aa16.27■□□□□ 0.2
UBXN1-209ENST00000528907 KPNA6O60684 536 aa16.27■□□□□ 0.2
UBXN1-209ENST00000528907 PPFIA4O75335 1185 aa16.27■□□□□ 0.2
UBXN1-209ENST00000528907 OR52Z1P0C646 297 aa16.27■□□□□ 0.2
UBXN1-209ENST00000528907 ATP2C1P98194 919 aaPredicted RBP16.27■□□□□ 0.2
UBXN1-209ENST00000528907 LRRC41Q15345 812 aa16.27■□□□□ 0.2
UBXN1-209ENST00000528907 CALCRLQ16602 461 aa16.27■□□□□ 0.2
UBXN1-209ENST00000528907 HSDL1Q3SXM5 330 aa16.27■□□□□ 0.2
UBXN1-209ENST00000528907 BRDTQ58F21 947 aaPredicted RBP16.27■□□□□ 0.2
UBXN1-209ENST00000528907 GJC2Q5T442 439 aaPredicted RBP16.27■□□□□ 0.2
UBXN1-209ENST00000528907 LRCH2Q5VUJ6 765 aa16.27■□□□□ 0.2
UBXN1-209ENST00000528907 ARL6IP4Q66PJ3 421 aaKnown RBP16.27■□□□□ 0.2
UBXN1-209ENST00000528907 CYFIP1Q7L576 1253 aa16.27■□□□□ 0.2
UBXN1-209ENST00000528907 SMAP1Q8IYB5 467 aaPredicted RBP16.27■□□□□ 0.2
UBXN1-209ENST00000528907 PCSK9Q8NBP7 692 aaKnown RBP16.27■□□□□ 0.2
UBXN1-209ENST00000528907 RDM1Q8NG50 284 aa16.27■□□□□ 0.2
UBXN1-209ENST00000528907 LENG1Q96BZ8 264 aaPredicted RBP16.27■□□□□ 0.2
UBXN1-209ENST00000528907 ZNF396Q96N95 335 aaPredicted RBP16.27■□□□□ 0.2
UBXN1-209ENST00000528907 GPR20Q99678 358 aa16.27■□□□□ 0.2
UBXN1-209ENST00000528907 TEKT3Q9BXF9 490 aa16.27■□□□□ 0.2
UBXN1-209ENST00000528907 TMEM60Q9H2L4 133 aa16.27■□□□□ 0.2
UBXN1-209ENST00000528907 POLR3EQ9NVU0 708 aa16.27■□□□□ 0.2
UBXN1-209ENST00000528907 SLC9A2Q9UBY0 812 aa16.27■□□□□ 0.2
UBXN1-209ENST00000528907 CEP131Q9UPN4 1083 aa16.27■□□□□ 0.2
UBXN1-209ENST00000528907 ATP6V1DQ9Y5K8 247 aa16.27■□□□□ 0.2
UBXN1-209ENST00000528907 MOXD2PA6NHM9 499 aa16.26■□□□□ 0.19
UBXN1-209ENST00000528907 ZEB2O60315 1214 aa16.26■□□□□ 0.19
UBXN1-209ENST00000528907 GAS7O60861 476 aa16.26■□□□□ 0.19
UBXN1-209ENST00000528907 PGK1P00558 417 aa16.26■□□□□ 0.19
UBXN1-209ENST00000528907 MMP3P08254 477 aa16.26■□□□□ 0.19
UBXN1-209ENST00000528907 ATP2B1P20020 1258 aa16.26■□□□□ 0.19
UBXN1-209ENST00000528907 SFNP31947 248 aa16.26■□□□□ 0.19
UBXN1-209ENST00000528907 NASPP49321 788 aaPredicted RBP16.26■□□□□ 0.19
UBXN1-209ENST00000528907 PTGDRQ13258 359 aa16.26■□□□□ 0.19
UBXN1-209ENST00000528907 PPP2R5CQ13362 524 aa16.26■□□□□ 0.19
UBXN1-209ENST00000528907 NBR1Q14596 966 aa16.26■□□□□ 0.19
UBXN1-209ENST00000528907 FSCN1Q16658 493 aaKnown RBP16.26■□□□□ 0.19
UBXN1-209ENST00000528907 ANO1Q5XXA6 986 aa16.26■□□□□ 0.19
UBXN1-209ENST00000528907 SEPT1Q8WYJ6 367 aa16.26■□□□□ 0.19
UBXN1-209ENST00000528907 SPATA33Q96N06 139 aa16.26■□□□□ 0.19
UBXN1-209ENST00000528907 BCAS3Q9H6U6 928 aa16.26■□□□□ 0.19
UBXN1-209ENST00000528907 VAV3Q9UKW4 847 aa16.26■□□□□ 0.19
UBXN1-209ENST00000528907 WDR81Q562E7 1941 aa16.25■□□□□ 0.19
UBXN1-209ENST00000528907 ELP1O95163 1332 aa16.25■□□□□ 0.19
UBXN1-209ENST00000528907 IGKV6D-21A0A0A0MT36 114 aa16.25■□□□□ 0.19
UBXN1-209ENST00000528907 GSTTP1A0A1W2PQM5 241 aa16.25■□□□□ 0.19
UBXN1-209ENST00000528907 C6orf222P0C671 652 aaPredicted RBP16.25■□□□□ 0.19
UBXN1-209ENST00000528907 SPIRE1Q08AE8 756 aa16.25■□□□□ 0.19
UBXN1-209ENST00000528907 PTPAQ15257 358 aa16.25■□□□□ 0.19
UBXN1-209ENST00000528907 SF3A1Q15459 793 aaKnown RBP16.25■□□□□ 0.19
UBXN1-209ENST00000528907 FAM173BQ6P4H8 233 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms