RNA–Protein interactions for RNA: ENST00000528484.5

CMTM1-211, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 726 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-211ENST00000528484 MBTPS1Q14703 1052 aa13.4□□□□□ -0.26
CMTM1-211ENST00000528484 TCTN1Q2MV58 587 aa13.4□□□□□ -0.26
CMTM1-211ENST00000528484 TRAF7Q6Q0C0 670 aa13.4□□□□□ -0.26
CMTM1-211ENST00000528484 PPP4R3CPQ6ZMV5 832 aa13.4□□□□□ -0.26
CMTM1-211ENST00000528484 STOX1Q6ZVD7 989 aa13.4□□□□□ -0.26
CMTM1-211ENST00000528484 TMEM192Q8IY95 271 aa13.4□□□□□ -0.26
CMTM1-211ENST00000528484 NEK9Q8TD19 979 aa13.4□□□□□ -0.26
CMTM1-211ENST00000528484 SP7Q8TDD2 431 aaPredicted RBP13.4□□□□□ -0.26
CMTM1-211ENST00000528484 WNT8BQ93098 351 aa13.4□□□□□ -0.26
CMTM1-211ENST00000528484 TOP1MTQ969P6 601 aa13.4□□□□□ -0.26
CMTM1-211ENST00000528484 POP1Q99575 1024 aaKnown RBP13.4□□□□□ -0.26
CMTM1-211ENST00000528484 USP26Q9BXU7 913 aa13.4□□□□□ -0.26
CMTM1-211ENST00000528484 IFIH1Q9BYX4 1025 aaKnown RBP13.4□□□□□ -0.26
CMTM1-211ENST00000528484 CD320Q9NPF0 282 aa13.4□□□□□ -0.26
CMTM1-211ENST00000528484 LAMA4Q16363 1823 aa13.4□□□□□ -0.26
CMTM1-211ENST00000528484 KLRF2D3W0D1 207 aa13.39□□□□□ -0.27
CMTM1-211ENST00000528484 STAM2O75886 525 aa13.39□□□□□ -0.27
CMTM1-211ENST00000528484 CTSHP09668 335 aa13.39□□□□□ -0.27
CMTM1-211ENST00000528484 SMIM10L2AP0DMW4 78 aa13.39□□□□□ -0.27
CMTM1-211ENST00000528484 SMIM10L2BP0DMW5 78 aa13.39□□□□□ -0.27
CMTM1-211ENST00000528484 UBA1P22314 1058 aaKnown RBP13.39□□□□□ -0.27
CMTM1-211ENST00000528484 GHRHRQ02643 423 aa13.39□□□□□ -0.27
CMTM1-211ENST00000528484 TRDNQ13061 729 aa13.39□□□□□ -0.27
CMTM1-211ENST00000528484 HDAC1Q13547 482 aaPredicted RBP13.39□□□□□ -0.27
CMTM1-211ENST00000528484 PGM5Q15124 567 aa13.39□□□□□ -0.27
CMTM1-211ENST00000528484 CWC27Q6UX04 472 aaKnown RBP13.39□□□□□ -0.27
CMTM1-211ENST00000528484 ALYREFQ86V81 257 aaKnown RBP13.39□□□□□ -0.27
CMTM1-211ENST00000528484 VSIG10LQ86VR7 867 aa13.39□□□□□ -0.27
CMTM1-211ENST00000528484 HOMER1Q86YM7 354 aa13.39□□□□□ -0.27
CMTM1-211ENST00000528484 FIBCD1Q8N539 461 aa13.39□□□□□ -0.27
CMTM1-211ENST00000528484 LNPKQ9C0E8 428 aa13.39□□□□□ -0.27
CMTM1-211ENST00000528484 KCNH6Q9H252 994 aa13.39□□□□□ -0.27
CMTM1-211ENST00000528484 CLDND1Q9NY35 253 aa13.39□□□□□ -0.27
CMTM1-211ENST00000528484 ZSWIM5Q9P217 1185 aa13.39□□□□□ -0.27
CMTM1-211ENST00000528484 C5orf42Q9H799 3197 aa13.38□□□□□ -0.27
CMTM1-211ENST00000528484 ERICH2A1L162 156 aa13.38□□□□□ -0.27
CMTM1-211ENST00000528484 TREHO43280 583 aa13.38□□□□□ -0.27
CMTM1-211ENST00000528484 LGALS2P05162 132 aa13.38□□□□□ -0.27
CMTM1-211ENST00000528484 HOXA13P31271 388 aaPredicted RBP13.38□□□□□ -0.27
CMTM1-211ENST00000528484 CTNNB1P35222 781 aa13.38□□□□□ -0.27
CMTM1-211ENST00000528484 TCEAL5Q5H9L2 206 aa13.38□□□□□ -0.27
CMTM1-211ENST00000528484 FCHSD1Q86WN1 690 aa13.38□□□□□ -0.27
CMTM1-211ENST00000528484 PPP2R3CQ969Q6 453 aa13.38□□□□□ -0.27
CMTM1-211ENST00000528484 IL17RAQ96F46 866 aa13.38□□□□□ -0.27
CMTM1-211ENST00000528484 C16orf70Q9BSU1 422 aa13.38□□□□□ -0.27
CMTM1-211ENST00000528484 C11orf84Q9BUA3 381 aaPredicted RBP13.38□□□□□ -0.27
CMTM1-211ENST00000528484 DSCC1Q9BVC3 393 aa13.38□□□□□ -0.27
CMTM1-211ENST00000528484 LMAN2LQ9H0V9 348 aa13.38□□□□□ -0.27
CMTM1-211ENST00000528484 RB1P06400 928 aa13.37□□□□□ -0.27
CMTM1-211ENST00000528484 RRP1P56182 461 aaKnown RBP13.37□□□□□ -0.27
CMTM1-211ENST00000528484 METTL7BQ6UX53 244 aa13.37□□□□□ -0.27
CMTM1-211ENST00000528484 RSPH3Q86UC2 560 aa13.37□□□□□ -0.27
CMTM1-211ENST00000528484 ADHFE1Q8IWW8 467 aa13.37□□□□□ -0.27
CMTM1-211ENST00000528484 RNPEPQ9H4A4 650 aa13.37□□□□□ -0.27
CMTM1-211ENST00000528484 RALGAPA2Q2PPJ7 1873 aa13.36□□□□□ -0.27
CMTM1-211ENST00000528484 NLRC5Q86WI3 1866 aa13.36□□□□□ -0.27
CMTM1-211ENST00000528484 KAT6AQ92794 2004 aa13.36□□□□□ -0.27
CMTM1-211ENST00000528484 FIBPO43427 364 aa13.36□□□□□ -0.27
CMTM1-211ENST00000528484 RGS20O76081 388 aa13.36□□□□□ -0.27
CMTM1-211ENST00000528484 ARHGAP4P98171 946 aa13.36□□□□□ -0.27
CMTM1-211ENST00000528484 ZP2Q05996 745 aa13.36□□□□□ -0.27
CMTM1-211ENST00000528484 SART3Q15020 963 aaKnown RBP13.36□□□□□ -0.27
CMTM1-211ENST00000528484 RPAINQ86UA6 219 aa13.36□□□□□ -0.27
CMTM1-211ENST00000528484 STAG2Q8N3U4 1231 aa13.36□□□□□ -0.27
CMTM1-211ENST00000528484 GIMAP8Q8ND71 665 aaPredicted RBP13.36□□□□□ -0.27
CMTM1-211ENST00000528484 CUL5Q93034 780 aa13.36□□□□□ -0.27
CMTM1-211ENST00000528484 MFSD14AQ96MC6 490 aa13.36□□□□□ -0.27
CMTM1-211ENST00000528484 COL4A6Q14031 1691 aa13.36□□□□□ -0.27
CMTM1-211ENST00000528484 TRIOO75962 3097 aa13.36□□□□□ -0.27
CMTM1-211ENST00000528484 OPLAHO14841 1288 aa13.35□□□□□ -0.27
CMTM1-211ENST00000528484 HOXC8P31273 242 aa13.35□□□□□ -0.27
CMTM1-211ENST00000528484 MRE11P49959 708 aa13.35□□□□□ -0.27
CMTM1-211ENST00000528484 SP2Q02086 613 aa13.35□□□□□ -0.27
CMTM1-211ENST00000528484 MKRN4PQ13434 485 aaPredicted RBP13.35□□□□□ -0.27
CMTM1-211ENST00000528484 AAMPQ13685 434 aa13.35□□□□□ -0.27
CMTM1-211ENST00000528484 HIC1Q14526 733 aa13.35□□□□□ -0.27
CMTM1-211ENST00000528484 UTP14CQ5TAP6 766 aaKnown RBP13.35□□□□□ -0.27
CMTM1-211ENST00000528484 B4GALNT3Q6L9W6 998 aa13.35□□□□□ -0.27
CMTM1-211ENST00000528484 TAF2Q6P1X5 1199 aa13.35□□□□□ -0.27
CMTM1-211ENST00000528484 CYFIP1Q7L576 1253 aa13.35□□□□□ -0.27
CMTM1-211ENST00000528484 IL31RAQ8NI17 732 aa13.35□□□□□ -0.27
CMTM1-211ENST00000528484 MTMR8Q96EF0 704 aa13.35□□□□□ -0.27
CMTM1-211ENST00000528484 RWDD1Q9H446 243 aaPredicted RBP13.35□□□□□ -0.27
CMTM1-211ENST00000528484 SETD4Q9NVD3 440 aa13.35□□□□□ -0.27
CMTM1-211ENST00000528484 MAD2L2Q9UI95 211 aa13.35□□□□□ -0.27
CMTM1-211ENST00000528484 NRCAMQ92823 1304 aa13.35□□□□□ -0.27
CMTM1-211ENST00000528484 PNMA6FA0A0J9YX94 578 aa13.34□□□□□ -0.27
CMTM1-211ENST00000528484 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.34□□□□□ -0.27
CMTM1-211ENST00000528484 RPLP2P05387 115 aaKnown RBP13.34□□□□□ -0.27
CMTM1-211ENST00000528484 ICAM3P32942 547 aa13.34□□□□□ -0.27
CMTM1-211ENST00000528484 SP4Q02446 784 aa13.34□□□□□ -0.27
CMTM1-211ENST00000528484 RALYLQ86SE5 291 aaKnown RBP13.34□□□□□ -0.27
CMTM1-211ENST00000528484 NLRX1Q86UT6 975 aa13.34□□□□□ -0.27
CMTM1-211ENST00000528484 ADGRA3Q8IWK6 1321 aa13.34□□□□□ -0.27
CMTM1-211ENST00000528484 POTEB3A0JP26 581 aa13.33□□□□□ -0.28
CMTM1-211ENST00000528484 PALM3A6NDB9 673 aaPredicted RBP13.33□□□□□ -0.28
CMTM1-211ENST00000528484 SPATA31C2B4DYI2 1134 aa13.33□□□□□ -0.28
CMTM1-211ENST00000528484 C5orf67F2Z3F1 127 aa13.33□□□□□ -0.28
CMTM1-211ENST00000528484 PPP1R11O60927 126 aaPredicted RBP13.33□□□□□ -0.28
CMTM1-211ENST00000528484 BMPR1AP36894 532 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms