RNA–Protein interactions for RNA: ENST00000528048.5

SDHD-205, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 1 (best) BASIC

Gene SDHD, Length 905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-205ENST00000528048 ANO3Q9BYT9 981 aa13.84□□□□□ -0.19
SDHD-205ENST00000528048 C22orf23Q9BZE7 217 aa13.84□□□□□ -0.19
SDHD-205ENST00000528048 SH3GLB2Q9NR46 395 aa13.84□□□□□ -0.19
SDHD-205ENST00000528048 TPCN1Q9ULQ1 816 aa13.84□□□□□ -0.19
SDHD-205ENST00000528048 NOD1Q9Y239 953 aa13.84□□□□□ -0.19
SDHD-205ENST00000528048 SP2Q02086 613 aa13.83□□□□□ -0.2
SDHD-205ENST00000528048 PTPN11Q06124 597 aaPredicted RBP13.83□□□□□ -0.2
SDHD-205ENST00000528048 MTMR1Q13613 665 aa13.83□□□□□ -0.2
SDHD-205ENST00000528048 C8orf34Q49A92 452 aa13.83□□□□□ -0.2
SDHD-205ENST00000528048 NFRKBQ6P4R8 1299 aa13.83□□□□□ -0.2
SDHD-205ENST00000528048 METTL7BQ6UX53 244 aa13.83□□□□□ -0.2
SDHD-205ENST00000528048 FAM126BQ8IXS8 530 aa13.83□□□□□ -0.2
SDHD-205ENST00000528048 C7orf31Q8N865 590 aa13.83□□□□□ -0.2
SDHD-205ENST00000528048 WASF1Q92558 559 aa13.83□□□□□ -0.2
SDHD-205ENST00000528048 MXRA8Q9BRK3 442 aa13.83□□□□□ -0.2
SDHD-205ENST00000528048 JADE2Q9NQC1 790 aa13.83□□□□□ -0.2
SDHD-205ENST00000528048 TMEM260Q9NX78 707 aa13.83□□□□□ -0.2
SDHD-205ENST00000528048 VPS54Q9P1Q0 977 aa13.83□□□□□ -0.2
SDHD-205ENST00000528048 UBIAD1Q9Y5Z9 338 aa13.83□□□□□ -0.2
SDHD-205ENST00000528048 GRIN2DO15399 1336 aa13.83□□□□□ -0.2
SDHD-205ENST00000528048 BRCA2P51587 3418 aa13.82□□□□□ -0.2
SDHD-205ENST00000528048 TIMP1P01033 207 aa13.82□□□□□ -0.2
SDHD-205ENST00000528048 SCRN1Q12765 414 aa13.82□□□□□ -0.2
SDHD-205ENST00000528048 HSDL1Q3SXM5 330 aa13.82□□□□□ -0.2
SDHD-205ENST00000528048 CEP55Q53EZ4 464 aa13.82□□□□□ -0.2
SDHD-205ENST00000528048 FAM177A1Q8N128 213 aaPredicted RBP13.82□□□□□ -0.2
SDHD-205ENST00000528048 TMEM199Q8N511 208 aa13.82□□□□□ -0.2
SDHD-205ENST00000528048 PGBD1Q96JS3 809 aa13.82□□□□□ -0.2
SDHD-205ENST00000528048 ALG1Q9BT22 464 aa13.82□□□□□ -0.2
SDHD-205ENST00000528048 TRPV6Q9H1D0 765 aa13.82□□□□□ -0.2
SDHD-205ENST00000528048 CD4P01730 458 aa13.81□□□□□ -0.2
SDHD-205ENST00000528048 ITGB5P18084 799 aa13.81□□□□□ -0.2
SDHD-205ENST00000528048 SREBF1P36956 1147 aa13.81□□□□□ -0.2
SDHD-205ENST00000528048 CLK2P49760 499 aaKnown RBP13.81□□□□□ -0.2
SDHD-205ENST00000528048 PSEN2P49810 448 aa13.81□□□□□ -0.2
SDHD-205ENST00000528048 ARHGAP4P98171 946 aa13.81□□□□□ -0.2
SDHD-205ENST00000528048 SP4Q02446 784 aa13.81□□□□□ -0.2
SDHD-205ENST00000528048 FPGSQ05932 587 aa13.81□□□□□ -0.2
SDHD-205ENST00000528048 MFSD10Q14728 455 aa13.81□□□□□ -0.2
SDHD-205ENST00000528048 GALNT17Q6IS24 598 aa13.81□□□□□ -0.2
SDHD-205ENST00000528048 TDHQ8IZJ6 230 aa13.81□□□□□ -0.2
SDHD-205ENST00000528048 RETREG2Q8NC44 543 aa13.81□□□□□ -0.2
SDHD-205ENST00000528048 SDF4Q9BRK5 362 aa13.81□□□□□ -0.2
SDHD-205ENST00000528048 PPP1R12CQ9BZL4 782 aa13.81□□□□□ -0.2
SDHD-205ENST00000528048 HIPK3Q9H422 1215 aa13.81□□□□□ -0.2
SDHD-205ENST00000528048 PKD2L1Q9P0L9 805 aa13.81□□□□□ -0.2
SDHD-205ENST00000528048 TBX21Q9UL17 535 aa13.81□□□□□ -0.2
SDHD-205ENST00000528048 LIMCH1Q9UPQ0 1083 aa13.81□□□□□ -0.2
SDHD-205ENST00000528048 B4GALT4O60513 344 aa13.8□□□□□ -0.2
SDHD-205ENST00000528048 SEMA3FQ13275 785 aa13.8□□□□□ -0.2
SDHD-205ENST00000528048 KIAA0753Q2KHM9 967 aa13.8□□□□□ -0.2
SDHD-205ENST00000528048 UTP14CQ5TAP6 766 aaKnown RBP13.8□□□□□ -0.2
SDHD-205ENST00000528048 MFSD5Q6N075 450 aa13.8□□□□□ -0.2
SDHD-205ENST00000528048 NECAB1Q8N987 351 aa13.8□□□□□ -0.2
SDHD-205ENST00000528048 SEPT1Q8WYJ6 367 aa13.8□□□□□ -0.2
SDHD-205ENST00000528048 TMEM121BQ9BXQ6 578 aaPredicted RBP13.8□□□□□ -0.2
SDHD-205ENST00000528048 PRO3102Q9H379 93 aa13.8□□□□□ -0.2
SDHD-205ENST00000528048 KCNH7Q9NS40 1196 aa13.8□□□□□ -0.2
SDHD-205ENST00000528048 TRMT13Q9NUP7 481 aaKnown RBP13.8□□□□□ -0.2
SDHD-205ENST00000528048 ORC3Q9UBD5 711 aaPredicted RBP13.8□□□□□ -0.2
SDHD-205ENST00000528048 ZNF215Q9UL58 517 aaPredicted RBP13.8□□□□□ -0.2
SDHD-205ENST00000528048 PCDHA4Q9UN74 947 aa13.8□□□□□ -0.2
SDHD-205ENST00000528048 H3BRB1 525 aa13.79□□□□□ -0.2
SDHD-205ENST00000528048 MEIS1O00470 390 aa13.79□□□□□ -0.2
SDHD-205ENST00000528048 ATP9AO75110 1047 aa13.79□□□□□ -0.2
SDHD-205ENST00000528048 CYP3A4P08684 503 aa13.79□□□□□ -0.2
SDHD-205ENST00000528048 ZNF286BP0CG31 522 aa13.79□□□□□ -0.2
SDHD-205ENST00000528048 PSEN1P49768 467 aa13.79□□□□□ -0.2
SDHD-205ENST00000528048 PPIGQ13427 754 aaKnown RBP eCLIP13.79□□□□□ -0.2
SDHD-205ENST00000528048 PTGISQ16647 500 aa13.79□□□□□ -0.2
SDHD-205ENST00000528048 ME3Q16798 604 aa13.79□□□□□ -0.2
SDHD-205ENST00000528048 NIPA1Q7RTP0 329 aa13.79□□□□□ -0.2
SDHD-205ENST00000528048 PLA2G4DQ86XP0 818 aa13.79□□□□□ -0.2
SDHD-205ENST00000528048 BLIDQ8IZY5 108 aa13.79□□□□□ -0.2
SDHD-205ENST00000528048 CCDC155Q8N6L0 562 aa13.79□□□□□ -0.2
SDHD-205ENST00000528048 KAT2BQ92831 832 aa13.79□□□□□ -0.2
SDHD-205ENST00000528048 ZSCAN31Q96LW9 406 aaPredicted RBP13.79□□□□□ -0.2
SDHD-205ENST00000528048 GPR20Q99678 358 aa13.79□□□□□ -0.2
SDHD-205ENST00000528048 TUT1Q9H6E5 874 aaKnown RBP13.79□□□□□ -0.2
SDHD-205ENST00000528048 BCAS3Q9H6U6 928 aa13.79□□□□□ -0.2
SDHD-205ENST00000528048 TCEAL9Q9UHQ7 104 aa13.79□□□□□ -0.2
SDHD-205ENST00000528048 ZNFX1Q9P2E3 1918 aaKnown RBP13.78□□□□□ -0.2
SDHD-205ENST00000528048 F2P00734 622 aa13.78□□□□□ -0.2
SDHD-205ENST00000528048 LGALS2P05162 132 aa13.78□□□□□ -0.2
SDHD-205ENST00000528048 ARP10275 920 aa13.78□□□□□ -0.2
SDHD-205ENST00000528048 GNAT1P11488 350 aa13.78□□□□□ -0.2
SDHD-205ENST00000528048 CYP2C9P11712 490 aa13.78□□□□□ -0.2
SDHD-205ENST00000528048 HOXD8P13378 290 aaPredicted RBP13.78□□□□□ -0.2
SDHD-205ENST00000528048 KCNA2P16389 499 aa13.78□□□□□ -0.2
SDHD-205ENST00000528048 ITGB8P26012 769 aa13.78□□□□□ -0.2
SDHD-205ENST00000528048 CYP2C18P33260 490 aa13.78□□□□□ -0.2
SDHD-205ENST00000528048 USP11P51784 963 aa13.78□□□□□ -0.2
SDHD-205ENST00000528048 BFSP2Q13515 415 aa13.78□□□□□ -0.2
SDHD-205ENST00000528048 TRIM29Q14134 588 aa13.78□□□□□ -0.2
SDHD-205ENST00000528048 SESTD1Q86VW0 696 aa13.78□□□□□ -0.2
SDHD-205ENST00000528048 RPUSD2Q8IZ73 545 aaKnown RBP13.78□□□□□ -0.2
SDHD-205ENST00000528048 IL27Q8NEV9 243 aa13.78□□□□□ -0.2
SDHD-205ENST00000528048 CYP2W1Q8TAV3 490 aa13.78□□□□□ -0.2
SDHD-205ENST00000528048 RASGRP4Q8TDF6 673 aa13.78□□□□□ -0.2
SDHD-205ENST00000528048 PPP1R13LQ8WUF5 828 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms