RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 CDHR1Q96JP9 859 aa17.78■□□□□ 0.44
CAPN1-213ENST00000527897 ANO3Q9BYT9 981 aa17.78■□□□□ 0.44
CAPN1-213ENST00000527897 AGXT2Q9BYV1 514 aa17.78■□□□□ 0.44
CAPN1-213ENST00000527897 MTIF3Q9H2K0 278 aaKnown RBP17.78■□□□□ 0.44
CAPN1-213ENST00000527897 MTMR10Q9NXD2 777 aa17.78■□□□□ 0.44
CAPN1-213ENST00000527897 TELO2Q9Y4R8 837 aa17.78■□□□□ 0.44
CAPN1-213ENST00000527897 COL6A3P12111 3177 aa17.78■□□□□ 0.44
CAPN1-213ENST00000527897 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.77■□□□□ 0.44
CAPN1-213ENST00000527897 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.77■□□□□ 0.44
CAPN1-213ENST00000527897 GRXCR1A8MXD5 290 aa17.77■□□□□ 0.44
CAPN1-213ENST00000527897 H3BRB1 525 aa17.77■□□□□ 0.44
CAPN1-213ENST00000527897 HAS3O00219 553 aa17.77■□□□□ 0.44
CAPN1-213ENST00000527897 ATP9AO75110 1047 aa17.77■□□□□ 0.44
CAPN1-213ENST00000527897 HOXD8P13378 290 aaPredicted RBP17.77■□□□□ 0.44
CAPN1-213ENST00000527897 JAKMIP3Q5VZ66 844 aa17.77■□□□□ 0.44
CAPN1-213ENST00000527897 TRIM50Q86XT4 487 aa17.77■□□□□ 0.44
CAPN1-213ENST00000527897 FBXL16Q8N461 479 aa17.77■□□□□ 0.44
CAPN1-213ENST00000527897 GPR20Q99678 358 aa17.77■□□□□ 0.44
CAPN1-213ENST00000527897 C16orf70Q9BSU1 422 aa17.77■□□□□ 0.44
CAPN1-213ENST00000527897 FTOQ9C0B1 505 aaKnown RBP eCLIP17.77■□□□□ 0.44
CAPN1-213ENST00000527897 TUT1Q9H6E5 874 aaKnown RBP17.77■□□□□ 0.44
CAPN1-213ENST00000527897 PDRG1Q9NUG6 133 aa17.77■□□□□ 0.44
CAPN1-213ENST00000527897 CXXC1Q9P0U4 656 aaPredicted RBP17.77■□□□□ 0.44
CAPN1-213ENST00000527897 UBIAD1Q9Y5Z9 338 aa17.77■□□□□ 0.44
CAPN1-213ENST00000527897 TANC1Q9C0D5 1861 aa17.76■□□□□ 0.43
CAPN1-213ENST00000527897 PITPNM1O00562 1244 aa17.76■□□□□ 0.43
CAPN1-213ENST00000527897 PRPF3O43395 683 aaKnown RBP17.76■□□□□ 0.43
CAPN1-213ENST00000527897 FOSP01100 380 aaPredicted RBP17.76■□□□□ 0.43
CAPN1-213ENST00000527897 IQCF3P0C7M6 154 aa17.76■□□□□ 0.43
CAPN1-213ENST00000527897 ZNF76P36508 570 aa17.76■□□□□ 0.43
CAPN1-213ENST00000527897 GIMAP8Q8ND71 665 aaPredicted RBP17.76■□□□□ 0.43
CAPN1-213ENST00000527897 HERVK_113Q902F9 699 aa17.76■□□□□ 0.43
CAPN1-213ENST00000527897 SENP7Q9BQF6 1050 aa17.76■□□□□ 0.43
CAPN1-213ENST00000527897 TM6SF1Q9BZW5 370 aa17.76■□□□□ 0.43
CAPN1-213ENST00000527897 GLT8D2Q9H1C3 349 aa17.76■□□□□ 0.43
CAPN1-213ENST00000527897 JADE2Q9NQC1 790 aa17.76■□□□□ 0.43
CAPN1-213ENST00000527897 NID2Q14112 1375 aa17.76■□□□□ 0.43
CAPN1-213ENST00000527897 KCNA2P16389 499 aa17.75■□□□□ 0.43
CAPN1-213ENST00000527897 DNAJB2P25686 324 aa17.75■□□□□ 0.43
CAPN1-213ENST00000527897 PKN1Q16512 942 aa17.75■□□□□ 0.43
CAPN1-213ENST00000527897 CAGE1Q8TC20 777 aa17.75■□□□□ 0.43
CAPN1-213ENST00000527897 CCDC12Q8WUD4 166 aaPredicted RBP17.75■□□□□ 0.43
CAPN1-213ENST00000527897 DHX38Q92620 1227 aaKnown RBP17.75■□□□□ 0.43
CAPN1-213ENST00000527897 CTAGE1Q96RT6 745 aa17.75■□□□□ 0.43
CAPN1-213ENST00000527897 MXRA8Q9BRK3 442 aa17.75■□□□□ 0.43
CAPN1-213ENST00000527897 C6orf50Q9HD87 102 aa17.75■□□□□ 0.43
CAPN1-213ENST00000527897 ZNF215Q9UL58 517 aaPredicted RBP17.75■□□□□ 0.43
CAPN1-213ENST00000527897 C17orf102A2RUQ5 167 aa17.74■□□□□ 0.43
CAPN1-213ENST00000527897 CPLX1O14810 134 aa17.74■□□□□ 0.43
CAPN1-213ENST00000527897 SMIM10L2AP0DMW4 78 aa17.74■□□□□ 0.43
CAPN1-213ENST00000527897 SMIM10L2BP0DMW5 78 aa17.74■□□□□ 0.43
CAPN1-213ENST00000527897 IFNAR1P17181 557 aa17.74■□□□□ 0.43
CAPN1-213ENST00000527897 AP3B2Q13367 1082 aa17.74■□□□□ 0.43
CAPN1-213ENST00000527897 HIC1Q14526 733 aa17.74■□□□□ 0.43
CAPN1-213ENST00000527897 NTRK3Q16288 839 aa17.74■□□□□ 0.43
CAPN1-213ENST00000527897 CYP2W1Q8TAV3 490 aa17.74■□□□□ 0.43
CAPN1-213ENST00000527897 ATP6V0A1Q93050 837 aa17.74■□□□□ 0.43
CAPN1-213ENST00000527897 RNF26Q9BY78 433 aaPredicted RBP17.74■□□□□ 0.43
CAPN1-213ENST00000527897 SEMA6BQ9H3T3 888 aa17.74■□□□□ 0.43
CAPN1-213ENST00000527897 VPS54Q9P1Q0 977 aa17.74■□□□□ 0.43
CAPN1-213ENST00000527897 SLC4A7Q9Y6M7 1214 aa17.74■□□□□ 0.43
CAPN1-213ENST00000527897 PFKMP08237 780 aa17.73■□□□□ 0.43
CAPN1-213ENST00000527897 CKBP12277 381 aa17.73■□□□□ 0.43
CAPN1-213ENST00000527897 ACTN1P12814 892 aa17.73■□□□□ 0.43
CAPN1-213ENST00000527897 MARK3P27448 753 aa17.73■□□□□ 0.43
CAPN1-213ENST00000527897 RFC2P35250 354 aa17.73■□□□□ 0.43
CAPN1-213ENST00000527897 TCF7P36402 384 aaPredicted RBP17.73■□□□□ 0.43
CAPN1-213ENST00000527897 PBX2P40425 430 aa17.73■□□□□ 0.43
CAPN1-213ENST00000527897 CLK2P49760 499 aaKnown RBP17.73■□□□□ 0.43
CAPN1-213ENST00000527897 EVCP57679 992 aa17.73■□□□□ 0.43
CAPN1-213ENST00000527897 ARHGAP4P98171 946 aa17.73■□□□□ 0.43
CAPN1-213ENST00000527897 SSRP1Q08945 709 aaKnown RBP17.73■□□□□ 0.43
CAPN1-213ENST00000527897 PTK7Q13308 1070 aa17.73■□□□□ 0.43
CAPN1-213ENST00000527897 RASIP1Q5U651 963 aa17.73■□□□□ 0.43
CAPN1-213ENST00000527897 LRRC8DQ7L1W4 858 aa17.73■□□□□ 0.43
CAPN1-213ENST00000527897 TRIM22Q8IYM9 498 aa17.73■□□□□ 0.43
CAPN1-213ENST00000527897 AFAP1L1Q8TED9 768 aa17.73■□□□□ 0.43
CAPN1-213ENST00000527897 SEPT1Q8WYJ6 367 aa17.73■□□□□ 0.43
CAPN1-213ENST00000527897 TIFAQ96CG3 184 aa17.73■□□□□ 0.43
CAPN1-213ENST00000527897 GUCD1Q96NT3 240 aa17.73■□□□□ 0.43
CAPN1-213ENST00000527897 UIMC1Q96RL1 719 aa17.73■□□□□ 0.43
CAPN1-213ENST00000527897 TTYH1Q9H313 450 aaPredicted RBP17.73■□□□□ 0.43
CAPN1-213ENST00000527897 KCNH7Q9NS40 1196 aa17.73■□□□□ 0.43
CAPN1-213ENST00000527897 KAT6AQ92794 2004 aa17.72■□□□□ 0.43
CAPN1-213ENST00000527897 GBF1Q92538 1859 aa17.72■□□□□ 0.43
CAPN1-213ENST00000527897 RBAK-RBAKDNI3L0D1 243 aa17.72■□□□□ 0.43
CAPN1-213ENST00000527897 ADAMTS3O15072 1205 aa17.72■□□□□ 0.43
CAPN1-213ENST00000527897 MAFGO15525 162 aa17.72■□□□□ 0.43
CAPN1-213ENST00000527897 ARP10275 920 aa17.72■□□□□ 0.43
CAPN1-213ENST00000527897 SELPP16109 830 aa17.72■□□□□ 0.43
CAPN1-213ENST00000527897 GNA11P29992 359 aa17.72■□□□□ 0.43
CAPN1-213ENST00000527897 SREBF1P36956 1147 aa17.72■□□□□ 0.43
CAPN1-213ENST00000527897 CEP55Q53EZ4 464 aa17.72■□□□□ 0.43
CAPN1-213ENST00000527897 REXO1Q8N1G1 1221 aaKnown RBP17.72■□□□□ 0.43
CAPN1-213ENST00000527897 RASGRP4Q8TDF6 673 aa17.72■□□□□ 0.43
CAPN1-213ENST00000527897 GLG1Q92896 1179 aa17.72■□□□□ 0.43
CAPN1-213ENST00000527897 WNT8BQ93098 351 aa17.72■□□□□ 0.43
CAPN1-213ENST00000527897 VWCEQ96DN2 955 aa17.72■□□□□ 0.43
CAPN1-213ENST00000527897 ZNF274Q96GC6 653 aaPredicted RBP17.72■□□□□ 0.43
CAPN1-213ENST00000527897 SDF4Q9BRK5 362 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms