RNA–Protein interactions for RNA: ENST00000527265.1

CLNS1A-208, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 620 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-208ENST00000527265 ZGLP1P0C6A0 271 aa4.78□□□□□ -1.64
CLNS1A-208ENST00000527265 POU3F2P20265 443 aaPredicted RBP4.78□□□□□ -1.64
CLNS1A-208ENST00000527265 TPP2P29144 1249 aaPredicted RBP4.78□□□□□ -1.64
CLNS1A-208ENST00000527265 CAP2P40123 477 aa4.78□□□□□ -1.64
CLNS1A-208ENST00000527265 NEK4P51957 841 aa4.78□□□□□ -1.64
CLNS1A-208ENST00000527265 EGR3Q06889 387 aa4.78□□□□□ -1.64
CLNS1A-208ENST00000527265 ZNF460Q14592 562 aa4.78□□□□□ -1.64
CLNS1A-208ENST00000527265 ABCB5Q2M3G0 1257 aa4.78□□□□□ -1.64
CLNS1A-208ENST00000527265 TRIM61Q5EBN2 209 aa4.78□□□□□ -1.64
CLNS1A-208ENST00000527265 INTS3Q68E01 1043 aaKnown RBP4.78□□□□□ -1.64
CLNS1A-208ENST00000527265 ZNF280DQ6N043 979 aa4.78□□□□□ -1.64
CLNS1A-208ENST00000527265 HDGFL2Q7Z4V5 671 aaPredicted RBP4.78□□□□□ -1.64
CLNS1A-208ENST00000527265 PHACTR4Q8IZ21 702 aa4.78□□□□□ -1.64
CLNS1A-208ENST00000527265 ENAHQ8N8S7 591 aaPredicted RBP4.78□□□□□ -1.64
CLNS1A-208ENST00000527265 ANKRD42Q8N9B4 389 aa4.78□□□□□ -1.64
CLNS1A-208ENST00000527265 TEX19Q8NA77 164 aa4.78□□□□□ -1.64
CLNS1A-208ENST00000527265 SYT8Q8NBV8 401 aa4.78□□□□□ -1.64
CLNS1A-208ENST00000527265 VPS37AQ8NEZ2 397 aa4.78□□□□□ -1.64
CLNS1A-208ENST00000527265 XAGE3Q8WTP9 111 aa4.78□□□□□ -1.64
CLNS1A-208ENST00000527265 IPO9Q96P70 1041 aaKnown RBP4.78□□□□□ -1.64
CLNS1A-208ENST00000527265 AARSD1Q9BTE6 412 aaKnown RBP4.78□□□□□ -1.64
CLNS1A-208ENST00000527265 DUSP13Q9UII6 198 aa4.78□□□□□ -1.64
CLNS1A-208ENST00000527265 LUC7L2Q9Y383 392 aaKnown RBP4.78□□□□□ -1.64
CLNS1A-208ENST00000527265 ANO9A1A5B4 782 aa4.77□□□□□ -1.65
CLNS1A-208ENST00000527265 NEMP1O14524 444 aa4.77□□□□□ -1.65
CLNS1A-208ENST00000527265 APAF1O14727 1248 aa4.77□□□□□ -1.65
CLNS1A-208ENST00000527265 N4BP3O15049 544 aa4.77□□□□□ -1.65
CLNS1A-208ENST00000527265 SLC26A4O43511 780 aa4.77□□□□□ -1.65
CLNS1A-208ENST00000527265 CT47B1P0C2W7 299 aaPredicted RBP4.77□□□□□ -1.65
CLNS1A-208ENST00000527265 LTKP29376 864 aa4.77□□□□□ -1.65
CLNS1A-208ENST00000527265 ID4P47928 161 aa4.77□□□□□ -1.65
CLNS1A-208ENST00000527265 HMGA2P52926 109 aa4.77□□□□□ -1.65
CLNS1A-208ENST00000527265 SUMO1P63165 101 aaKnown RBP4.77□□□□□ -1.65
CLNS1A-208ENST00000527265 SLC7A5Q01650 507 aa4.77□□□□□ -1.65
CLNS1A-208ENST00000527265 DUSP4Q13115 394 aa4.77□□□□□ -1.65
CLNS1A-208ENST00000527265 SIM2Q14190 667 aaPredicted RBP4.77□□□□□ -1.65
CLNS1A-208ENST00000527265 PTPN21Q16825 1174 aa4.77□□□□□ -1.65
CLNS1A-208ENST00000527265 VMACQ2NL98 169 aa4.77□□□□□ -1.65
CLNS1A-208ENST00000527265 SV2CQ496J9 727 aa4.77□□□□□ -1.65
CLNS1A-208ENST00000527265 ALFQ53S48 1182 aa4.77□□□□□ -1.65
CLNS1A-208ENST00000527265 ADGRF1Q5T601 910 aa4.77□□□□□ -1.65
CLNS1A-208ENST00000527265 CCDC70Q6NSX1 233 aa4.77□□□□□ -1.65
CLNS1A-208ENST00000527265 CNKSR3Q6P9H4 555 aa4.77□□□□□ -1.65
CLNS1A-208ENST00000527265 BRAPQ7Z569 592 aa4.77□□□□□ -1.65
CLNS1A-208ENST00000527265 SCUBE1Q8IWY4 988 aa4.77□□□□□ -1.65
CLNS1A-208ENST00000527265 CPXCR1Q8N123 301 aa4.77□□□□□ -1.65
CLNS1A-208ENST00000527265 CYB5D2Q8WUJ1 264 aa4.77□□□□□ -1.65
CLNS1A-208ENST00000527265 USP7Q93009 1102 aa4.77□□□□□ -1.65
CLNS1A-208ENST00000527265 CCDC74BQ96LY2 380 aa4.77□□□□□ -1.65
CLNS1A-208ENST00000527265 TTC1Q99614 292 aa4.77□□□□□ -1.65
CLNS1A-208ENST00000527265 ELAC2Q9BQ52 826 aaKnown RBP4.77□□□□□ -1.65
CLNS1A-208ENST00000527265 MTFR1LQ9H019 292 aa4.77□□□□□ -1.65
CLNS1A-208ENST00000527265 SP110Q9HB58 689 aa4.77□□□□□ -1.65
CLNS1A-208ENST00000527265 NGRNQ9NPE2 291 aaKnown RBP4.77□□□□□ -1.65
CLNS1A-208ENST00000527265 GPATCH2Q9NW75 528 aa4.77□□□□□ -1.65
CLNS1A-208ENST00000527265 ZNF69Q9UC07 566 aa4.77□□□□□ -1.65
CLNS1A-208ENST00000527265 MBD1Q9UIS9 605 aaPredicted RBP4.77□□□□□ -1.65
CLNS1A-208ENST00000527265 TNPO3Q9Y5L0 923 aaKnown RBP4.77□□□□□ -1.65
CLNS1A-208ENST00000527265 PPP2R3BQ9Y5P8 575 aa4.77□□□□□ -1.65
CLNS1A-208ENST00000527265 KLRG2A4D1S0 409 aaPredicted RBP4.76□□□□□ -1.65
CLNS1A-208ENST00000527265 HRKO00198 91 aa4.76□□□□□ -1.65
CLNS1A-208ENST00000527265 RGS13O14921 159 aa4.76□□□□□ -1.65
CLNS1A-208ENST00000527265 PIP5K1CO60331 668 aa4.76□□□□□ -1.65
CLNS1A-208ENST00000527265 UBOX5O94941 541 aa4.76□□□□□ -1.65
CLNS1A-208ENST00000527265 LDHCP07864 332 aa4.76□□□□□ -1.65
CLNS1A-208ENST00000527265 U2AF1L5P0DN76 240 aaPredicted RBP4.76□□□□□ -1.65
CLNS1A-208ENST00000527265 SRGNP10124 158 aa4.76□□□□□ -1.65
CLNS1A-208ENST00000527265 BPIP17213 487 aa4.76□□□□□ -1.65
CLNS1A-208ENST00000527265 HALP42357 657 aa4.76□□□□□ -1.65
CLNS1A-208ENST00000527265 PPP2R2AP63151 447 aa4.76□□□□□ -1.65
CLNS1A-208ENST00000527265 U2AF1Q01081 240 aaKnown RBP eCLIP4.76□□□□□ -1.65
CLNS1A-208ENST00000527265 GBX1Q14549 363 aa4.76□□□□□ -1.65
CLNS1A-208ENST00000527265 GRM3Q14832 879 aa4.76□□□□□ -1.65
CLNS1A-208ENST00000527265 MINDY4Q4G0A6 757 aa4.76□□□□□ -1.65
CLNS1A-208ENST00000527265 TIGD5Q53EQ6 642 aa4.76□□□□□ -1.65
CLNS1A-208ENST00000527265 COBLL1Q53SF7 1204 aa4.76□□□□□ -1.65
CLNS1A-208ENST00000527265 TOGARAM2Q6ZUX3 1019 aa4.76□□□□□ -1.65
CLNS1A-208ENST00000527265 FGD2Q7Z6J4 655 aa4.76□□□□□ -1.65
CLNS1A-208ENST00000527265 SMAP1Q8IYB5 467 aaPredicted RBP4.76□□□□□ -1.65
CLNS1A-208ENST00000527265 LINC01356Q8N9X3 169 aa4.76□□□□□ -1.65
CLNS1A-208ENST00000527265 SLC7A14Q8TBB6 771 aa4.76□□□□□ -1.65
CLNS1A-208ENST00000527265 IFT22Q9H7X7 185 aa4.76□□□□□ -1.65
CLNS1A-208ENST00000527265 CRTAC1Q9NQ79 661 aa4.76□□□□□ -1.65
CLNS1A-208ENST00000527265 SUCOQ9UBS9 1254 aaKnown RBP4.76□□□□□ -1.65
CLNS1A-208ENST00000527265 NDOR1Q9UHB4 597 aa4.76□□□□□ -1.65
CLNS1A-208ENST00000527265 ZBTB21Q9ULJ3 1066 aa4.76□□□□□ -1.65
CLNS1A-208ENST00000527265 APOBEC2Q9Y235 224 aaKnown RBP4.76□□□□□ -1.65
CLNS1A-208ENST00000527265 FAM50BQ9Y247 325 aa4.76□□□□□ -1.65
CLNS1A-208ENST00000527265 OPA1O60313 960 aa4.75□□□□□ -1.65
CLNS1A-208ENST00000527265 NBNO60934 754 aa4.75□□□□□ -1.65
CLNS1A-208ENST00000527265 PRKD3O94806 890 aa4.75□□□□□ -1.65
CLNS1A-208ENST00000527265 FSHBP01225 129 aa4.75□□□□□ -1.65
CLNS1A-208ENST00000527265 C6orf222P0C671 652 aaPredicted RBP4.75□□□□□ -1.65
CLNS1A-208ENST00000527265 PF4V1P10720 104 aa4.75□□□□□ -1.65
CLNS1A-208ENST00000527265 PHKG2P15735 406 aa4.75□□□□□ -1.65
CLNS1A-208ENST00000527265 TNFRSF1AP19438 455 aa4.75□□□□□ -1.65
CLNS1A-208ENST00000527265 GBP1P32455 592 aa4.75□□□□□ -1.65
CLNS1A-208ENST00000527265 PPM1FP49593 454 aaPredicted RBP4.75□□□□□ -1.65
CLNS1A-208ENST00000527265 GRB10Q13322 594 aa4.75□□□□□ -1.65
CLNS1A-208ENST00000527265 GALEQ14376 348 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms