RNA–Protein interactions for RNA: ENST00000526425.1

USP35-201, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best) BASIC

Gene USP35, Length 3,770 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-201ENST00000526425 PRKG1Q13976 671 aa10.88□□□□□ -0.67
USP35-201ENST00000526425 ABCB5Q2M3G0 1257 aa10.88□□□□□ -0.67
USP35-201ENST00000526425 CERS5Q8N5B7 392 aa10.88□□□□□ -0.67
USP35-201ENST00000526425 BPIFA3Q9BQP9 254 aa10.88□□□□□ -0.67
USP35-201ENST00000526425 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.88□□□□□ -0.67
USP35-201ENST00000526425 PSDA5PKW4 1024 aaPredicted RBP10.88□□□□□ -0.67
USP35-201ENST00000526425 PDHBP11177 359 aa10.88□□□□□ -0.67
USP35-201ENST00000526425 TPP2P29144 1249 aaPredicted RBP10.88□□□□□ -0.67
USP35-201ENST00000526425 SP4Q02446 784 aa10.88□□□□□ -0.67
USP35-201ENST00000526425 TBC1D10BQ4KMP7 808 aaPredicted RBP10.88□□□□□ -0.67
USP35-201ENST00000526425 HHIPL2Q6UWX4 724 aa10.88□□□□□ -0.67
USP35-201ENST00000526425 MTRQ99707 1265 aa10.88□□□□□ -0.67
USP35-201ENST00000526425 TSG101Q99816 390 aa10.88□□□□□ -0.67
USP35-201ENST00000526425 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.88□□□□□ -0.673e-6■□□□□ 11.1
USP35-201ENST00000526425 GJA3Q9Y6H8 435 aa10.88□□□□□ -0.67
USP35-201ENST00000526425 RREB1Q92766 1687 aa10.87□□□□□ -0.67
USP35-201ENST00000526425 AKR1B10O60218 316 aa10.87□□□□□ -0.67
USP35-201ENST00000526425 PPFIA4O75335 1185 aa10.87□□□□□ -0.67
USP35-201ENST00000526425 NT5C2P49902 561 aa10.87□□□□□ -0.67
USP35-201ENST00000526425 INHBEP58166 350 aa10.87□□□□□ -0.67
USP35-201ENST00000526425 DPYDQ12882 1025 aa10.87□□□□□ -0.67
USP35-201ENST00000526425 NLRC4Q9NPP4 1024 aa10.87□□□□□ -0.67
USP35-201ENST00000526425 CHCHD3Q9NX63 227 aaKnown RBP10.87□□□□□ -0.67
USP35-201ENST00000526425 ZNF232Q9UNY5 417 aa10.87□□□□□ -0.67
USP35-201ENST00000526425 KIAA1024Q9UPX6 916 aa10.87□□□□□ -0.67
USP35-201ENST00000526425 BCORQ6W2J9 1755 aa10.87□□□□□ -0.67
USP35-201ENST00000526425 STAT3P40763 770 aa10.87□□□□□ -0.67
USP35-201ENST00000526425 SLC30A10Q6XR72 485 aa10.87□□□□□ -0.67
USP35-201ENST00000526425 CNGA4Q8IV77 575 aa10.87□□□□□ -0.67
USP35-201ENST00000526425 FAM163AQ96GL9 167 aaPredicted RBP10.87□□□□□ -0.67
USP35-201ENST00000526425 FAM210AQ96ND0 272 aa10.87□□□□□ -0.67
USP35-201ENST00000526425 TAOK3Q9H2K8 898 aa10.87□□□□□ -0.67
USP35-201ENST00000526425 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.87□□□□□ -0.67
USP35-201ENST00000526425 CNGA1P29973 690 aa10.87□□□□□ -0.67
USP35-201ENST00000526425 ZNF658Q5TYW1 1059 aaPredicted RBP10.87□□□□□ -0.67
USP35-201ENST00000526425 KCNV1Q6PIU1 500 aa10.87□□□□□ -0.67
USP35-201ENST00000526425 SEPT11Q9NVA2 429 aaKnown RBP10.87□□□□□ -0.67
USP35-201ENST00000526425 SWAP70Q9UH65 585 aa10.87□□□□□ -0.67
USP35-201ENST00000526425 MYH13Q9UKX3 1938 aa10.87□□□□□ -0.67
USP35-201ENST00000526425 CHUKO15111 745 aa10.86□□□□□ -0.67
USP35-201ENST00000526425 IL17AQ16552 155 aa10.86□□□□□ -0.67
USP35-201ENST00000526425 DHX36Q9H2U1 1008 aaKnown RBP10.86□□□□□ -0.67
USP35-201ENST00000526425 FAM53CQ9NYF3 392 aa10.86□□□□□ -0.67
USP35-201ENST00000526425 ZNF831Q5JPB2 1677 aa10.86□□□□□ -0.67
USP35-201ENST00000526425 SORBS3O60504 671 aa10.86□□□□□ -0.67
USP35-201ENST00000526425 RHBDL3P58872 404 aa10.86□□□□□ -0.67
USP35-201ENST00000526425 PABPC4Q13310 644 aaKnown RBP eCLIP10.86□□□□□ -0.67
USP35-201ENST00000526425 SPA17Q15506 151 aa10.86□□□□□ -0.67
USP35-201ENST00000526425 PTPROQ16827 1216 aa10.86□□□□□ -0.67
USP35-201ENST00000526425 TMEM132AQ24JP5 1023 aa10.86□□□□□ -0.67
USP35-201ENST00000526425 ASPRV1Q53RT3 343 aa10.86□□□□□ -0.67
USP35-201ENST00000526425 CCDC125Q86Z20 511 aa10.86□□□□□ -0.67
USP35-201ENST00000526425 ANKRD13CQ8N6S4 541 aa10.86□□□□□ -0.67
USP35-201ENST00000526425 JADE2Q9NQC1 790 aa10.86□□□□□ -0.67
USP35-201ENST00000526425 PI4KBQ9UBF8 816 aa10.86□□□□□ -0.67
USP35-201ENST00000526425 TFR2Q9UP52 801 aa10.86□□□□□ -0.67
USP35-201ENST00000526425 PALM3A6NDB9 673 aaPredicted RBP10.86□□□□□ -0.67
USP35-201ENST00000526425 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.86□□□□□ -0.67
USP35-201ENST00000526425 ENC1O14682 589 aa10.86□□□□□ -0.67
USP35-201ENST00000526425 ZRANB2O95218 330 aaKnown RBP eCLIP10.86□□□□□ -0.67
USP35-201ENST00000526425 CDC37Q16543 378 aaPredicted RBP10.86□□□□□ -0.67
USP35-201ENST00000526425 TUBGCP2Q9BSJ2 902 aa10.86□□□□□ -0.67
USP35-201ENST00000526425 TRIM4Q9C037 500 aa10.86□□□□□ -0.67
USP35-201ENST00000526425 DDTLA6NHG4 134 aaPredicted RBP10.85□□□□□ -0.67
USP35-201ENST00000526425 GAKO14976 1311 aa10.85□□□□□ -0.67
USP35-201ENST00000526425 FXR1P51114 621 aaKnown RBP eCLIP10.85□□□□□ -0.67
USP35-201ENST00000526425 SCNN1BP51168 640 aa10.85□□□□□ -0.67
USP35-201ENST00000526425 RPS6KA3P51812 740 aa10.85□□□□□ -0.67
USP35-201ENST00000526425 QRICH1Q2TAL8 776 aa10.85□□□□□ -0.67
USP35-201ENST00000526425 CCDC122Q5T0U0 273 aa10.85□□□□□ -0.67
USP35-201ENST00000526425 CNOT6LQ96LI5 555 aaKnown RBP10.85□□□□□ -0.67
USP35-201ENST00000526425 EHD4Q9H223 541 aa10.85□□□□□ -0.67
USP35-201ENST00000526425 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.85□□□□□ -0.67
USP35-201ENST00000526425 LY75O60449 1722 aa10.85□□□□□ -0.67
USP35-201ENST00000526425 SLC37A4O43826 429 aa10.85□□□□□ -0.67
USP35-201ENST00000526425 MDM2Q00987 491 aaPredicted RBP10.85□□□□□ -0.67
USP35-201ENST00000526425 CYP27A1Q02318 531 aa10.85□□□□□ -0.67
USP35-201ENST00000526425 DCAF17Q5H9S7 520 aaPredicted RBP10.85□□□□□ -0.67
USP35-201ENST00000526425 ARL6IP4Q66PJ3 421 aaKnown RBP10.85□□□□□ -0.67
USP35-201ENST00000526425 CNNM4Q6P4Q7 775 aa10.85□□□□□ -0.67
USP35-201ENST00000526425 GPBP1Q86WP2 473 aa10.85□□□□□ -0.67
USP35-201ENST00000526425 AFAP1L1Q8TED9 768 aa10.85□□□□□ -0.67
USP35-201ENST00000526425 LARP4BQ92615 738 aaKnown RBP10.85□□□□□ -0.67
USP35-201ENST00000526425 ZKSCAN4Q969J2 545 aaPredicted RBP10.85□□□□□ -0.67
USP35-201ENST00000526425 RSRC1Q96IZ7 334 aaKnown RBP10.85□□□□□ -0.67
USP35-201ENST00000526425 CCDC17Q96LX7 622 aa10.85□□□□□ -0.67
USP35-201ENST00000526425 CCDC114Q96M63 670 aa10.85□□□□□ -0.67
USP35-201ENST00000526425 WDR24Q96S15 920 aa10.85□□□□□ -0.67
USP35-201ENST00000526425 MTFR1LQ9H019 292 aa10.85□□□□□ -0.67
USP35-201ENST00000526425 CICQ96RK0 1608 aaPredicted RBP10.85□□□□□ -0.67
USP35-201ENST00000526425 MYH7P12883 1935 aa10.85□□□□□ -0.67
USP35-201ENST00000526425 PPP1R3GB7ZBB8 358 aa10.85□□□□□ -0.67
USP35-201ENST00000526425 E9PMD0 336 aa10.85□□□□□ -0.67
USP35-201ENST00000526425 ERLIN1O75477 346 aa10.85□□□□□ -0.67
USP35-201ENST00000526425 STK4Q13043 487 aa10.85□□□□□ -0.67
USP35-201ENST00000526425 TCP11X2Q5H9J9 407 aa10.85□□□□□ -0.67
USP35-201ENST00000526425 DACT2Q5SW24 774 aa10.85□□□□□ -0.67
USP35-201ENST00000526425 FBXO11Q86XK2 927 aa10.85□□□□□ -0.67
USP35-201ENST00000526425 RIN2Q8WYP3 895 aaPredicted RBP10.85□□□□□ -0.67
USP35-201ENST00000526425 CCDC42Q96M95 316 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms