RNA–Protein interactions for RNA: ENST00000526055.5

TSPAN4-216, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 469 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-216ENST00000526055 GDF6Q6KF10 455 aaPredicted RBP21.11■□□□□ 0.97
TSPAN4-216ENST00000526055 CYFIP1Q7L576 1253 aa21.11■□□□□ 0.97
TSPAN4-216ENST00000526055 ZNF274Q96GC6 653 aaPredicted RBP21.11■□□□□ 0.97
TSPAN4-216ENST00000526055 RNF26Q9BY78 433 aaPredicted RBP21.11■□□□□ 0.97
TSPAN4-216ENST00000526055 JADE2Q9NQC1 790 aa21.11■□□□□ 0.97
TSPAN4-216ENST00000526055 HDAC6Q9UBN7 1215 aa21.11■□□□□ 0.97
TSPAN4-216ENST00000526055 PARNO95453 639 aaKnown RBP21.1■□□□□ 0.97
TSPAN4-216ENST00000526055 CLK2P49760 499 aaKnown RBP21.1■□□□□ 0.97
TSPAN4-216ENST00000526055 ANAPC15P60006 121 aa21.1■□□□□ 0.97
TSPAN4-216ENST00000526055 MTMR1Q13613 665 aa21.1■□□□□ 0.97
TSPAN4-216ENST00000526055 TOB2Q14106 344 aaPredicted RBP21.1■□□□□ 0.97
TSPAN4-216ENST00000526055 NTRK3Q16288 839 aa21.1■□□□□ 0.97
TSPAN4-216ENST00000526055 ZNF697Q5TEC3 545 aa21.1■□□□□ 0.97
TSPAN4-216ENST00000526055 AFAP1L1Q8TED9 768 aa21.1■□□□□ 0.97
TSPAN4-216ENST00000526055 GPR20Q99678 358 aa21.1■□□□□ 0.97
TSPAN4-216ENST00000526055 ALG1Q9BT22 464 aa21.1■□□□□ 0.97
TSPAN4-216ENST00000526055 ZMYND12Q9H0C1 365 aa21.1■□□□□ 0.97
TSPAN4-216ENST00000526055 MTMR10Q9NXD2 777 aa21.1■□□□□ 0.97
TSPAN4-216ENST00000526055 H3BRB1 525 aa21.09■□□□□ 0.97
TSPAN4-216ENST00000526055 LGALS2P05162 132 aa21.09■□□□□ 0.97
TSPAN4-216ENST00000526055 ACRP10323 421 aa21.09■□□□□ 0.97
TSPAN4-216ENST00000526055 PTK7Q13308 1070 aa21.09■□□□□ 0.97
TSPAN4-216ENST00000526055 CTAGE1Q96RT6 745 aa21.09■□□□□ 0.97
TSPAN4-216ENST00000526055 ANO3Q9BYT9 981 aa21.09■□□□□ 0.97
TSPAN4-216ENST00000526055 TUT1Q9H6E5 874 aaKnown RBP21.09■□□□□ 0.97
TSPAN4-216ENST00000526055 C6orf50Q9HD87 102 aa21.09■□□□□ 0.97
TSPAN4-216ENST00000526055 ZNF215Q9UL58 517 aaPredicted RBP21.09■□□□□ 0.97
TSPAN4-216ENST00000526055 SORBS3O60504 671 aa21.08■□□□□ 0.97
TSPAN4-216ENST00000526055 IQCF3P0C7M6 154 aa21.08■□□□□ 0.97
TSPAN4-216ENST00000526055 KCNA2P16389 499 aa21.08■□□□□ 0.97
TSPAN4-216ENST00000526055 GNA11P29992 359 aa21.08■□□□□ 0.97
TSPAN4-216ENST00000526055 SREBF1P36956 1147 aa21.08■□□□□ 0.97
TSPAN4-216ENST00000526055 PKN1Q16512 942 aa21.08■□□□□ 0.97
TSPAN4-216ENST00000526055 CCDC148Q8NFR7 591 aa21.08■□□□□ 0.97
TSPAN4-216ENST00000526055 SCLYQ96I15 445 aa21.08■□□□□ 0.97
TSPAN4-216ENST00000526055 MXRA8Q9BRK3 442 aa21.08■□□□□ 0.97
TSPAN4-216ENST00000526055 BCAS3Q9H6U6 928 aa21.08■□□□□ 0.97
TSPAN4-216ENST00000526055 HOXC8P31273 242 aa21.07■□□□□ 0.96
TSPAN4-216ENST00000526055 Q7L0L9 218 aa21.07■□□□□ 0.96
TSPAN4-216ENST00000526055 FAM177A1Q8N128 213 aaPredicted RBP21.07■□□□□ 0.96
TSPAN4-216ENST00000526055 BICD2Q8TD16 824 aa21.07■□□□□ 0.96
TSPAN4-216ENST00000526055 PPP1R13LQ8WUF5 828 aa21.07■□□□□ 0.96
TSPAN4-216ENST00000526055 UPF3BQ9BZI7 483 aaKnown RBP21.07■□□□□ 0.96
TSPAN4-216ENST00000526055 PDRG1Q9NUG6 133 aa21.07■□□□□ 0.96
TSPAN4-216ENST00000526055 A0A0C4DFX4 3053 aa21.06■□□□□ 0.96
TSPAN4-216ENST00000526055 ACTN1P12814 892 aa21.06■□□□□ 0.96
TSPAN4-216ENST00000526055 SELPP16109 830 aa21.06■□□□□ 0.96
TSPAN4-216ENST00000526055 CEP55Q53EZ4 464 aa21.06■□□□□ 0.96
TSPAN4-216ENST00000526055 CPLX2Q6PUV4 134 aaKnown RBP21.06■□□□□ 0.96
TSPAN4-216ENST00000526055 NIPA1Q7RTP0 329 aa21.06■□□□□ 0.96
TSPAN4-216ENST00000526055 TRIM22Q8IYM9 498 aa21.06■□□□□ 0.96
TSPAN4-216ENST00000526055 SEPT1Q8WYJ6 367 aa21.06■□□□□ 0.96
TSPAN4-216ENST00000526055 PHKBQ93100 1093 aa21.06■□□□□ 0.96
TSPAN4-216ENST00000526055 IL17RAQ96F46 866 aa21.06■□□□□ 0.96
TSPAN4-216ENST00000526055 SH3GLB2Q9NR46 395 aa21.06■□□□□ 0.96
TSPAN4-216ENST00000526055 NFASCO94856 1347 aa21.05■□□□□ 0.96
TSPAN4-216ENST00000526055 C17orf102A2RUQ5 167 aa21.05■□□□□ 0.96
TSPAN4-216ENST00000526055 ATP9AO75110 1047 aa21.05■□□□□ 0.96
TSPAN4-216ENST00000526055 GNAT1P11488 350 aa21.05■□□□□ 0.96
TSPAN4-216ENST00000526055 CCT2P78371 535 aaKnown RBP21.05■□□□□ 0.96
TSPAN4-216ENST00000526055 REXO1Q8N1G1 1221 aaKnown RBP21.05■□□□□ 0.96
TSPAN4-216ENST00000526055 DHX38Q92620 1227 aaKnown RBP21.05■□□□□ 0.96
TSPAN4-216ENST00000526055 VWCEQ96DN2 955 aa21.05■□□□□ 0.96
TSPAN4-216ENST00000526055 SLC26A6Q9BXS9 759 aa21.05■□□□□ 0.96
TSPAN4-216ENST00000526055 KCNH7Q9NS40 1196 aa21.05■□□□□ 0.96
TSPAN4-216ENST00000526055 STXBP5LQ9Y2K9 1186 aa21.05■□□□□ 0.96
TSPAN4-216ENST00000526055 MEIS1O00470 390 aa21.04■□□□□ 0.96
TSPAN4-216ENST00000526055 CPLX1O14810 134 aa21.04■□□□□ 0.96
TSPAN4-216ENST00000526055 CYP3A4P08684 503 aa21.04■□□□□ 0.96
TSPAN4-216ENST00000526055 SMIM10L2AP0DMW4 78 aa21.04■□□□□ 0.96
TSPAN4-216ENST00000526055 SMIM10L2BP0DMW5 78 aa21.04■□□□□ 0.96
TSPAN4-216ENST00000526055 ARHGAP4P98171 946 aa21.04■□□□□ 0.96
TSPAN4-216ENST00000526055 LRRC8DQ7L1W4 858 aa21.04■□□□□ 0.96
TSPAN4-216ENST00000526055 OTOP2Q7RTS6 562 aa21.04■□□□□ 0.96
TSPAN4-216ENST00000526055 SERINC5Q86VE9 423 aa21.04■□□□□ 0.96
TSPAN4-216ENST00000526055 SEMA6BQ9H3T3 888 aa21.04■□□□□ 0.96
TSPAN4-216ENST00000526055 NCOA5Q9HCD5 579 aaKnown RBP21.04■□□□□ 0.96
TSPAN4-216ENST00000526055 CAND2O75155 1236 aa21.03■□□□□ 0.96
TSPAN4-216ENST00000526055 CKBP12277 381 aa21.03■□□□□ 0.96
TSPAN4-216ENST00000526055 DNAJB2P25686 324 aa21.03■□□□□ 0.96
TSPAN4-216ENST00000526055 TCF7P36402 384 aaPredicted RBP21.03■□□□□ 0.96
TSPAN4-216ENST00000526055 SSRP1Q08945 709 aaKnown RBP21.03■□□□□ 0.96
TSPAN4-216ENST00000526055 ANKRD1Q15327 319 aa21.03■□□□□ 0.96
TSPAN4-216ENST00000526055 RAB30Q15771 203 aa21.03■□□□□ 0.96
TSPAN4-216ENST00000526055 TRIM71Q2Q1W2 868 aaKnown RBP21.03■□□□□ 0.96
TSPAN4-216ENST00000526055 DEFB128Q7Z7B8 93 aa21.03■□□□□ 0.96
TSPAN4-216ENST00000526055 CRYGNQ8WXF5 182 aa21.03■□□□□ 0.96
TSPAN4-216ENST00000526055 PGBD1Q96JS3 809 aa21.03■□□□□ 0.96
TSPAN4-216ENST00000526055 SDF4Q9BRK5 362 aa21.03■□□□□ 0.96
TSPAN4-216ENST00000526055 JPH1Q9HDC5 661 aaPredicted RBP21.03■□□□□ 0.96
TSPAN4-216ENST00000526055 TMEM260Q9NX78 707 aa21.03■□□□□ 0.96
TSPAN4-216ENST00000526055 CXXC1Q9P0U4 656 aaPredicted RBP21.03■□□□□ 0.96
TSPAN4-216ENST00000526055 SLC4A7Q9Y6M7 1214 aa21.03■□□□□ 0.96
TSPAN4-216ENST00000526055 TANC1Q9C0D5 1861 aa21.03■□□□□ 0.96
TSPAN4-216ENST00000526055 BAIAP3O94812 1187 aa21.02■□□□□ 0.96
TSPAN4-216ENST00000526055 DEXIO95424 95 aa21.02■□□□□ 0.96
TSPAN4-216ENST00000526055 ZNF76P36508 570 aa21.02■□□□□ 0.96
TSPAN4-216ENST00000526055 SP4Q02446 784 aa21.02■□□□□ 0.96
TSPAN4-216ENST00000526055 UTP14CQ5TAP6 766 aaKnown RBP21.02■□□□□ 0.96
TSPAN4-216ENST00000526055 JAKMIP3Q5VZ66 844 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms