RNA–Protein interactions for RNA: ENST00000525990.1

SSBP3-210, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-210ENST00000525990 KCNV1Q6PIU1 500 aa13.87□□□□□ -0.19
SSBP3-210ENST00000525990 LRRC8DQ7L1W4 858 aa13.87□□□□□ -0.19
SSBP3-210ENST00000525990 DHX32Q7L7V1 743 aaKnown RBP13.87□□□□□ -0.19
SSBP3-210ENST00000525990 AFAP1L1Q8TED9 768 aa13.87□□□□□ -0.19
SSBP3-210ENST00000525990 CUL5Q93034 780 aa13.87□□□□□ -0.19
SSBP3-210ENST00000525990 GPR20Q99678 358 aa13.87□□□□□ -0.19
SSBP3-210ENST00000525990 KATNAL1Q9BW62 490 aa13.87□□□□□ -0.19
SSBP3-210ENST00000525990 PSTPIP2Q9H939 334 aa13.87□□□□□ -0.19
SSBP3-210ENST00000525990 PRDM6Q9NQX0 595 aa13.87□□□□□ -0.19
SSBP3-210ENST00000525990 MSRAQ9UJ68 235 aa13.87□□□□□ -0.19
SSBP3-210ENST00000525990 PRUNE2Q8WUY3 3088 aa13.87□□□□□ -0.19
SSBP3-210ENST00000525990 GOLGA8AA7E2F4 631 aa13.86□□□□□ -0.19
SSBP3-210ENST00000525990 GOLGA8BA8MQT2 603 aa13.86□□□□□ -0.19
SSBP3-210ENST00000525990 H3BRB1 525 aa13.86□□□□□ -0.19
SSBP3-210ENST00000525990 ADAMTS3O15072 1205 aa13.86□□□□□ -0.19
SSBP3-210ENST00000525990 ZBTB43O43298 467 aa13.86□□□□□ -0.19
SSBP3-210ENST00000525990 SMIM10L2AP0DMW4 78 aa13.86□□□□□ -0.19
SSBP3-210ENST00000525990 SMIM10L2BP0DMW5 78 aa13.86□□□□□ -0.19
SSBP3-210ENST00000525990 SELPP16109 830 aa13.86□□□□□ -0.19
SSBP3-210ENST00000525990 ITGB5P18084 799 aa13.86□□□□□ -0.19
SSBP3-210ENST00000525990 RFC2P35250 354 aa13.86□□□□□ -0.19
SSBP3-210ENST00000525990 RBL2Q08999 1139 aa13.86□□□□□ -0.19
SSBP3-210ENST00000525990 APOBRQ0VD83 1088 aa13.86□□□□□ -0.19
SSBP3-210ENST00000525990 RAB30Q15771 203 aa13.86□□□□□ -0.19
SSBP3-210ENST00000525990 RTN1Q16799 776 aa13.86□□□□□ -0.19
SSBP3-210ENST00000525990 GNPTABQ3T906 1256 aa13.86□□□□□ -0.19
SSBP3-210ENST00000525990 UTP14CQ5TAP6 766 aaKnown RBP13.86□□□□□ -0.19
SSBP3-210ENST00000525990 CAGE1Q8TC20 777 aa13.86□□□□□ -0.19
SSBP3-210ENST00000525990 PPM1EQ8WY54 764 aa13.86□□□□□ -0.19
SSBP3-210ENST00000525990 TUT1Q9H6E5 874 aaKnown RBP13.86□□□□□ -0.19
SSBP3-210ENST00000525990 CERS4Q9HA82 394 aa13.86□□□□□ -0.19
SSBP3-210ENST00000525990 NAP1L2Q9ULW6 460 aaPredicted RBP13.86□□□□□ -0.19
SSBP3-210ENST00000525990 SNX14Q9Y5W7 946 aa13.86□□□□□ -0.19
SSBP3-210ENST00000525990 CHD7Q9P2D1 2997 aa13.86□□□□□ -0.19
SSBP3-210ENST00000525990 NLRC5Q86WI3 1866 aa13.85□□□□□ -0.19
SSBP3-210ENST00000525990 RFXAPO00287 272 aa13.85□□□□□ -0.19
SSBP3-210ENST00000525990 NOP56O00567 594 aaKnown RBP13.85□□□□□ -0.19
SSBP3-210ENST00000525990 TREHO43280 583 aa13.85□□□□□ -0.19
SSBP3-210ENST00000525990 PPFIA3O75145 1194 aa13.85□□□□□ -0.19
SSBP3-210ENST00000525990 STAM2O75886 525 aa13.85□□□□□ -0.19
SSBP3-210ENST00000525990 CA3P07451 260 aa13.85□□□□□ -0.19
SSBP3-210ENST00000525990 KCNA2P16389 499 aa13.85□□□□□ -0.19
SSBP3-210ENST00000525990 DEFB103AP81534 67 aa13.85□□□□□ -0.19
SSBP3-210ENST00000525990 PTK7Q13308 1070 aa13.85□□□□□ -0.19
SSBP3-210ENST00000525990 PPP2R2DQ66LE6 453 aa13.85□□□□□ -0.19
SSBP3-210ENST00000525990 METTL7BQ6UX53 244 aa13.85□□□□□ -0.19
SSBP3-210ENST00000525990 CCDC155Q8N6L0 562 aa13.85□□□□□ -0.19
SSBP3-210ENST00000525990 JAKMIP1Q96N16 626 aaKnown RBP13.85□□□□□ -0.19
SSBP3-210ENST00000525990 COL25A1Q9BXS0 654 aaPredicted RBP13.85□□□□□ -0.19
SSBP3-210ENST00000525990 RNPEPQ9H4A4 650 aa13.85□□□□□ -0.19
SSBP3-210ENST00000525990 SLC28A3Q9HAS3 691 aa13.85□□□□□ -0.19
SSBP3-210ENST00000525990 TMEM260Q9NX78 707 aa13.85□□□□□ -0.19
SSBP3-210ENST00000525990 PCDHA6Q9UN73 950 aa13.85□□□□□ -0.19
SSBP3-210ENST00000525990 PCDHA8Q9Y5H6 950 aa13.85□□□□□ -0.19
SSBP3-210ENST00000525990 PCDHA11Q9Y5I1 949 aa13.85□□□□□ -0.19
SSBP3-210ENST00000525990 EPOPA6NHQ4 379 aa13.84□□□□□ -0.19
SSBP3-210ENST00000525990 STXBP3O00186 592 aa13.84□□□□□ -0.19
SSBP3-210ENST00000525990 ACTN1P12814 892 aa13.84□□□□□ -0.19
SSBP3-210ENST00000525990 HOXC8P31273 242 aa13.84□□□□□ -0.19
SSBP3-210ENST00000525990 ADD1P35611 737 aaKnown RBP13.84□□□□□ -0.19
SSBP3-210ENST00000525990 NAPAP54920 295 aa13.84□□□□□ -0.19
SSBP3-210ENST00000525990 WDR5P61964 334 aaKnown RBP13.84□□□□□ -0.19
SSBP3-210ENST00000525990 NEDD9Q14511 834 aa13.84□□□□□ -0.19
SSBP3-210ENST00000525990 SYNE3Q6ZMZ3 975 aa13.84□□□□□ -0.19
SSBP3-210ENST00000525990 Q6ZUG5 572 aa13.84□□□□□ -0.19
SSBP3-210ENST00000525990 SERINC5Q86VE9 423 aa13.84□□□□□ -0.19
SSBP3-210ENST00000525990 CYP2W1Q8TAV3 490 aa13.84□□□□□ -0.19
SSBP3-210ENST00000525990 KCNB2Q92953 911 aa13.84□□□□□ -0.19
SSBP3-210ENST00000525990 ATP6V0A1Q93050 837 aa13.84□□□□□ -0.19
SSBP3-210ENST00000525990 SETD4Q9NVD3 440 aa13.84□□□□□ -0.19
SSBP3-210ENST00000525990 RBM28Q9NW13 759 aaKnown RBP13.84□□□□□ -0.19
SSBP3-210ENST00000525990 UBIAD1Q9Y5Z9 338 aa13.84□□□□□ -0.19
SSBP3-210ENST00000525990 V9GY48 417 aaPredicted RBP13.84□□□□□ -0.19
SSBP3-210ENST00000525990 REV3LO60673 3130 aa13.84□□□□□ -0.19
SSBP3-210ENST00000525990 C17orf102A2RUQ5 167 aa13.83□□□□□ -0.2
SSBP3-210ENST00000525990 LCHNA4D1U4 455 aa13.83□□□□□ -0.2
SSBP3-210ENST00000525990 SPDYE3A6NKU9 549 aa13.83□□□□□ -0.2
SSBP3-210ENST00000525990 CXCL10P02778 98 aa13.83□□□□□ -0.2
SSBP3-210ENST00000525990 CTSHP09668 335 aa13.83□□□□□ -0.2
SSBP3-210ENST00000525990 IGFBP4P22692 258 aa13.83□□□□□ -0.2
SSBP3-210ENST00000525990 HSPA4P34932 840 aa13.83□□□□□ -0.2
SSBP3-210ENST00000525990 TCF7P36402 384 aaPredicted RBP13.83□□□□□ -0.2
SSBP3-210ENST00000525990 THPOP40225 353 aa13.83□□□□□ -0.2
SSBP3-210ENST00000525990 CCDC85BQ15834 202 aaPredicted RBP13.83□□□□□ -0.2
SSBP3-210ENST00000525990 NLRX1Q86UT6 975 aa13.83□□□□□ -0.2
SSBP3-210ENST00000525990 HERC6Q8IVU3 1022 aa13.83□□□□□ -0.2
SSBP3-210ENST00000525990 BRF1Q92994 677 aa13.83□□□□□ -0.2
SSBP3-210ENST00000525990 GPRASP2Q96D09 838 aa13.83□□□□□ -0.2
SSBP3-210ENST00000525990 SLC9A7Q96T83 725 aa13.83□□□□□ -0.2
SSBP3-210ENST00000525990 GAS2L1Q99501 681 aaPredicted RBP13.83□□□□□ -0.2
SSBP3-210ENST00000525990 ATG2AQ2TAZ0 1938 aa13.83□□□□□ -0.2
SSBP3-210ENST00000525990 GSTTP1A0A1W2PQM5 241 aa13.82□□□□□ -0.2
SSBP3-210ENST00000525990 MARK3P27448 753 aa13.82□□□□□ -0.2
SSBP3-210ENST00000525990 MTMR1Q13613 665 aa13.82□□□□□ -0.2
SSBP3-210ENST00000525990 KRT32Q14532 448 aa13.82□□□□□ -0.2
SSBP3-210ENST00000525990 KRT40Q6A162 431 aa13.82□□□□□ -0.2
SSBP3-210ENST00000525990 XRRA1Q6P2D8 792 aa13.82□□□□□ -0.2
SSBP3-210ENST00000525990 CNKSR3Q6P9H4 555 aa13.82□□□□□ -0.2
SSBP3-210ENST00000525990 LMBR1Q8WVP7 490 aa13.82□□□□□ -0.2
SSBP3-210ENST00000525990 ZBTB10Q96DT7 871 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 733.1 ms