RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 HOXC12P31275 282 aa6.21□□□□□ -1.42
CSDE1-211ENST00000525970 FOXO4P98177 505 aa6.21□□□□□ -1.42
CSDE1-211ENST00000525970 VWA3BQ502W6 1294 aa6.21□□□□□ -1.42
CSDE1-211ENST00000525970 BICRALQ6AI39 1079 aa6.21□□□□□ -1.42
CSDE1-211ENST00000525970 NSMFQ6X4W1 530 aa6.21□□□□□ -1.42
CSDE1-211ENST00000525970 STRA8Q7Z7C7 330 aa6.21□□□□□ -1.42
CSDE1-211ENST00000525970 SLC7A14Q8TBB6 771 aa6.21□□□□□ -1.42
CSDE1-211ENST00000525970 FNIP1Q8TF40 1166 aa6.21□□□□□ -1.42
CSDE1-211ENST00000525970 COPS5Q92905 334 aa6.21□□□□□ -1.42
CSDE1-211ENST00000525970 CEP89Q96ST8 783 aa6.21□□□□□ -1.42
CSDE1-211ENST00000525970 BDH2Q9BUT1 245 aa6.21□□□□□ -1.42
CSDE1-211ENST00000525970 EID1Q9Y6B2 187 aa6.21□□□□□ -1.42
CSDE1-211ENST00000525970 PMF1-BGLAPU3KQ54 211 aa6.21□□□□□ -1.42
CSDE1-211ENST00000525970 SH3D21A4FU49 640 aa6.2□□□□□ -1.42
CSDE1-211ENST00000525970 DLX3O60479 287 aa6.2□□□□□ -1.42
CSDE1-211ENST00000525970 THBDP07204 575 aa6.2□□□□□ -1.42
CSDE1-211ENST00000525970 PLS3P13797 630 aa6.2□□□□□ -1.42
CSDE1-211ENST00000525970 RBM10P98175 930 aaKnown RBP6.2□□□□□ -1.42
CSDE1-211ENST00000525970 LIPIQ6XZB0 460 aa6.2□□□□□ -1.42
CSDE1-211ENST00000525970 SAPCD2Q86UD0 394 aa6.2□□□□□ -1.42
CSDE1-211ENST00000525970 GGNQ86UU5 652 aa6.2□□□□□ -1.42
CSDE1-211ENST00000525970 CCDC140Q96MF4 163 aa6.2□□□□□ -1.42
CSDE1-211ENST00000525970 PHLDB1Q86UU1 1377 aa6.19□□□□□ -1.42
CSDE1-211ENST00000525970 CCDC194A0A1B0GVG4 234 aa6.19□□□□□ -1.42
CSDE1-211ENST00000525970 NPTXRO95502 500 aa6.19□□□□□ -1.42
CSDE1-211ENST00000525970 CPP00450 1065 aa6.19□□□□□ -1.42
CSDE1-211ENST00000525970 NCAM1P13591 858 aa6.19□□□□□ -1.42
CSDE1-211ENST00000525970 HTRA3P83110 453 aa6.19□□□□□ -1.42
CSDE1-211ENST00000525970 PRR5P85299 388 aa6.19□□□□□ -1.42
CSDE1-211ENST00000525970 RTP5Q14D33 572 aa6.19□□□□□ -1.42
CSDE1-211ENST00000525970 SF1Q15637 639 aaKnown RBP6.19□□□□□ -1.42
CSDE1-211ENST00000525970 PPM1KQ8N3J5 372 aa6.19□□□□□ -1.42
CSDE1-211ENST00000525970 IPO9Q96P70 1041 aaKnown RBP6.19□□□□□ -1.42
CSDE1-211ENST00000525970 SLC52A2Q9HAB3 445 aa6.19□□□□□ -1.42
CSDE1-211ENST00000525970 SFMBT1Q9UHJ3 866 aa6.19□□□□□ -1.42
CSDE1-211ENST00000525970 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.18□□□□□ -1.42
CSDE1-211ENST00000525970 F8W031 263 aaPredicted RBP6.18□□□□□ -1.42
CSDE1-211ENST00000525970 PRICKLE3O43900 615 aaPredicted RBP6.18□□□□□ -1.42
CSDE1-211ENST00000525970 ALDH1L1O75891 902 aa6.18□□□□□ -1.42
CSDE1-211ENST00000525970 PLA2G1BP04054 148 aaKnown RBP6.18□□□□□ -1.42
CSDE1-211ENST00000525970 ATF2P15336 505 aa6.18□□□□□ -1.42
CSDE1-211ENST00000525970 TACR1P25103 407 aa6.18□□□□□ -1.42
CSDE1-211ENST00000525970 GABREP78334 506 aa6.18□□□□□ -1.42
CSDE1-211ENST00000525970 NTRK3Q16288 839 aa6.18□□□□□ -1.42
CSDE1-211ENST00000525970 NFE2Q16621 373 aaPredicted RBP6.18□□□□□ -1.42
CSDE1-211ENST00000525970 CT47A1Q5JQC4 288 aaPredicted RBP6.18□□□□□ -1.42
CSDE1-211ENST00000525970 CNNM4Q6P4Q7 775 aa6.18□□□□□ -1.42
CSDE1-211ENST00000525970 BRAPQ7Z569 592 aa6.18□□□□□ -1.42
CSDE1-211ENST00000525970 B3GNT8Q7Z7M8 397 aa6.18□□□□□ -1.42
CSDE1-211ENST00000525970 USP33Q8TEY7 942 aa6.18□□□□□ -1.42
CSDE1-211ENST00000525970 FRS2Q8WU20 508 aa6.18□□□□□ -1.42
CSDE1-211ENST00000525970 SCLYQ96I15 445 aa6.18□□□□□ -1.42
CSDE1-211ENST00000525970 C8orf48Q96LL4 319 aa6.18□□□□□ -1.42
CSDE1-211ENST00000525970 MTFR1LQ9H019 292 aa6.18□□□□□ -1.42
CSDE1-211ENST00000525970 USP40Q9NVE5 1235 aa6.18□□□□□ -1.42
CSDE1-211ENST00000525970 GEMIN8Q9NWZ8 242 aaKnown RBP6.18□□□□□ -1.42
CSDE1-211ENST00000525970 DBR1Q9UK59 544 aaKnown RBP6.18□□□□□ -1.42
CSDE1-211ENST00000525970 C7orf72A4D263 438 aa6.17□□□□□ -1.42
CSDE1-211ENST00000525970 NPHS1O60500 1241 aa6.17□□□□□ -1.42
CSDE1-211ENST00000525970 EFCAB14O75071 495 aa6.17□□□□□ -1.42
CSDE1-211ENST00000525970 MAP4K4O95819 1239 aaPredicted RBP6.17□□□□□ -1.42
CSDE1-211ENST00000525970 SCG5P05408 212 aa6.17□□□□□ -1.42
CSDE1-211ENST00000525970 EPHB1P54762 984 aa6.17□□□□□ -1.42
CSDE1-211ENST00000525970 GFRA1P56159 465 aa6.17□□□□□ -1.42
CSDE1-211ENST00000525970 CYP4F3Q08477 520 aa6.17□□□□□ -1.42
CSDE1-211ENST00000525970 MAP4K2Q12851 820 aa6.17□□□□□ -1.42
CSDE1-211ENST00000525970 TTF1Q15361 905 aaPredicted RBP6.17□□□□□ -1.42
CSDE1-211ENST00000525970 DHCR24Q15392 516 aa6.17□□□□□ -1.42
CSDE1-211ENST00000525970 PRSS53Q2L4Q9 553 aa6.17□□□□□ -1.42
CSDE1-211ENST00000525970 ZXDCQ2QGD7 858 aaPredicted RBP6.17□□□□□ -1.42
CSDE1-211ENST00000525970 UBXN11Q5T124 520 aa6.17□□□□□ -1.42
CSDE1-211ENST00000525970 IQCEQ6IPM2 695 aa6.17□□□□□ -1.42
CSDE1-211ENST00000525970 DDX46Q7L014 1031 aaKnown RBP6.17□□□□□ -1.42
CSDE1-211ENST00000525970 NECAB2Q7Z6G3 386 aa6.17□□□□□ -1.42
CSDE1-211ENST00000525970 FGD2Q7Z6J4 655 aa6.17□□□□□ -1.42
CSDE1-211ENST00000525970 AHI1Q8N157 1196 aa6.17□□□□□ -1.42
CSDE1-211ENST00000525970 TSPAN17Q96FV3 270 aa6.17□□□□□ -1.42
CSDE1-211ENST00000525970 C1orf159Q96HA4 380 aa6.17□□□□□ -1.42
CSDE1-211ENST00000525970 MMP19Q99542 508 aa6.17□□□□□ -1.42
CSDE1-211ENST00000525970 ASPSCR1Q9BZE9 553 aa6.17□□□□□ -1.42
CSDE1-211ENST00000525970 BTG4Q9NY30 223 aa6.17□□□□□ -1.42
CSDE1-211ENST00000525970 GULP1Q9UBP9 304 aa6.17□□□□□ -1.42
CSDE1-211ENST00000525970 RWDD3Q9Y3V2 267 aa6.17□□□□□ -1.42
CSDE1-211ENST00000525970 HCFC2Q9Y5Z7 792 aa6.17□□□□□ -1.42
CSDE1-211ENST00000525970 MEFVO15553 781 aaPredicted RBP6.16□□□□□ -1.42
CSDE1-211ENST00000525970 ASLP04424 464 aa6.16□□□□□ -1.42
CSDE1-211ENST00000525970 ASGR2P07307 311 aa6.16□□□□□ -1.42
CSDE1-211ENST00000525970 GLI4P10075 376 aa6.16□□□□□ -1.42
CSDE1-211ENST00000525970 GUCY2FP51841 1108 aa6.16□□□□□ -1.42
CSDE1-211ENST00000525970 TBX4P57082 545 aa6.16□□□□□ -1.42
CSDE1-211ENST00000525970 FAM50AQ14320 339 aaKnown RBP6.16□□□□□ -1.42
CSDE1-211ENST00000525970 PCBP1Q15365 356 aaKnown RBP eCLIP6.16□□□□□ -1.42
CSDE1-211ENST00000525970 SEPT7Q16181 437 aaKnown RBP6.16□□□□□ -1.42
CSDE1-211ENST00000525970 NT5DC1Q5TFE4 455 aa6.16□□□□□ -1.42
CSDE1-211ENST00000525970 CABP7Q86V35 215 aa6.16□□□□□ -1.42
CSDE1-211ENST00000525970 LZTR1Q8N653 840 aa6.16□□□□□ -1.42
CSDE1-211ENST00000525970 TMEM145Q8NBT3 493 aa6.16□□□□□ -1.42
CSDE1-211ENST00000525970 NPLOC4Q8TAT6 608 aa6.16□□□□□ -1.42
CSDE1-211ENST00000525970 KCTD13Q8WZ19 329 aa6.16□□□□□ -1.42
CSDE1-211ENST00000525970 ALG3Q92685 438 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms