RNA–Protein interactions for RNA: ENST00000525469.1

CD44-218, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 705 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-218ENST00000525469 CYP2B6P20813 491 aa5.83□□□□□ -1.48
CD44-218ENST00000525469 CACNB3P54284 484 aa5.83□□□□□ -1.48
CD44-218ENST00000525469 RTP1P59025 263 aa5.83□□□□□ -1.48
CD44-218ENST00000525469 TPM4P67936 248 aa5.83□□□□□ -1.48
CD44-218ENST00000525469 ATP11AP98196 1134 aa5.83□□□□□ -1.48
CD44-218ENST00000525469 ZNF211Q13398 564 aaPredicted RBP5.83□□□□□ -1.48
CD44-218ENST00000525469 MTMR3Q13615 1198 aa5.83□□□□□ -1.48
CD44-218ENST00000525469 MOGSQ13724 837 aa5.83□□□□□ -1.48
CD44-218ENST00000525469 DHX8Q14562 1220 aaKnown RBP5.83□□□□□ -1.48
CD44-218ENST00000525469 TERF2Q15554 542 aa5.83□□□□□ -1.48
CD44-218ENST00000525469 FAM110CQ1W6H9 321 aa5.83□□□□□ -1.48
CD44-218ENST00000525469 ICE2Q659A1 982 aa5.83□□□□□ -1.48
CD44-218ENST00000525469 CASC1Q6TDU7 716 aa5.83□□□□□ -1.48
CD44-218ENST00000525469 C15orf52Q6ZUT6 534 aaKnown RBP5.83□□□□□ -1.48
CD44-218ENST00000525469 CCAR1Q8IX12 1150 aaKnown RBP5.83□□□□□ -1.48
CD44-218ENST00000525469 BADQ92934 168 aa5.83□□□□□ -1.48
CD44-218ENST00000525469 TEKT1Q969V4 418 aa5.83□□□□□ -1.48
CD44-218ENST00000525469 FAM107BQ9H098 131 aa5.83□□□□□ -1.48
CD44-218ENST00000525469 EPHX3Q9H6B9 360 aa5.83□□□□□ -1.48
CD44-218ENST00000525469 CWC22Q9HCG8 908 aaKnown RBP5.83□□□□□ -1.48
CD44-218ENST00000525469 KANSL3Q9P2N6 904 aa5.83□□□□□ -1.48
CD44-218ENST00000525469 DDX49Q9Y6V7 483 aaKnown RBP5.83□□□□□ -1.48
CD44-218ENST00000525469 DNAH12Q6ZR08 3092 aa5.83□□□□□ -1.48
CD44-218ENST00000525469 RLFQ13129 1914 aa5.83□□□□□ -1.48
CD44-218ENST00000525469 A0A0G2JLL6 359 aaPredicted RBP5.82□□□□□ -1.48
CD44-218ENST00000525469 TTC36A6NLP5 189 aa5.82□□□□□ -1.48
CD44-218ENST00000525469 VGLL3A8MV65 326 aa5.82□□□□□ -1.48
CD44-218ENST00000525469 H3BRB1 525 aa5.82□□□□□ -1.48
CD44-218ENST00000525469 ATP8B1O43520 1251 aa5.82□□□□□ -1.48
CD44-218ENST00000525469 NDUFB5O43674 189 aa5.82□□□□□ -1.48
CD44-218ENST00000525469 TAF5LO75529 589 aa5.82□□□□□ -1.48
CD44-218ENST00000525469 GCLCP48506 637 aaPredicted RBP5.82□□□□□ -1.48
CD44-218ENST00000525469 NEXNQ0ZGT2 675 aa5.82□□□□□ -1.48
CD44-218ENST00000525469 NOL9Q5SY16 702 aaKnown RBP5.82□□□□□ -1.48
CD44-218ENST00000525469 FKBP1CQ5VVH2 108 aa5.82□□□□□ -1.48
CD44-218ENST00000525469 CCDC129Q6ZRS4 1044 aa5.82□□□□□ -1.48
CD44-218ENST00000525469 PRRT2Q7Z6L0 340 aaPredicted RBP5.82□□□□□ -1.48
CD44-218ENST00000525469 KLHL23Q8NBE8 558 aa5.82□□□□□ -1.48
CD44-218ENST00000525469 WFDC12Q8WWY7 111 aa5.82□□□□□ -1.48
CD44-218ENST00000525469 TRIB2Q92519 343 aa5.82□□□□□ -1.48
CD44-218ENST00000525469 WNT8BQ93098 351 aa5.82□□□□□ -1.48
CD44-218ENST00000525469 TP53INP1Q96A56 240 aa5.82□□□□□ -1.48
CD44-218ENST00000525469 TIFAQ96CG3 184 aa5.82□□□□□ -1.48
CD44-218ENST00000525469 NECAB3Q96P71 396 aaPredicted RBP5.82□□□□□ -1.48
CD44-218ENST00000525469 LACRTQ9GZZ8 138 aa5.82□□□□□ -1.48
CD44-218ENST00000525469 TUT1Q9H6E5 874 aaKnown RBP5.82□□□□□ -1.48
CD44-218ENST00000525469 AKTIPQ9H8T0 292 aa5.82□□□□□ -1.48
CD44-218ENST00000525469 MED4Q9NPJ6 270 aa5.82□□□□□ -1.48
CD44-218ENST00000525469 SPTLC3Q9NUV7 552 aa5.82□□□□□ -1.48
CD44-218ENST00000525469 DDX41Q9UJV9 622 aaKnown RBP5.82□□□□□ -1.48
CD44-218ENST00000525469 ZHX2Q9Y6X8 837 aa5.82□□□□□ -1.48
CD44-218ENST00000525469 PLXNB2O15031 1838 aa5.82□□□□□ -1.48
CD44-218ENST00000525469 A0A1B0GUL6 1792 aa5.81□□□□□ -1.48
CD44-218ENST00000525469 CDH23Q9H251 3354 aa5.81□□□□□ -1.48
CD44-218ENST00000525469 CCDC196A0A1B0GTZ2 297 aa5.81□□□□□ -1.48
CD44-218ENST00000525469 ANKRD18BA2A2Z9 1011 aa5.81□□□□□ -1.48
CD44-218ENST00000525469 SMIM22K7EJ46 135 aa5.81□□□□□ -1.48
CD44-218ENST00000525469 KIF2AO00139 706 aaPredicted RBP5.81□□□□□ -1.48
CD44-218ENST00000525469 SNAP23O00161 211 aa5.81□□□□□ -1.48
CD44-218ENST00000525469 PLIN1O60240 522 aa5.81□□□□□ -1.48
CD44-218ENST00000525469 ICMTO60725 284 aa5.81□□□□□ -1.48
CD44-218ENST00000525469 DEAF1O75398 565 aaPredicted RBP5.81□□□□□ -1.48
CD44-218ENST00000525469 CYP2E1P05181 493 aaPredicted RBP5.81□□□□□ -1.48
CD44-218ENST00000525469 GUCY2CP25092 1073 aa5.81□□□□□ -1.48
CD44-218ENST00000525469 CNGA1P29973 690 aa5.81□□□□□ -1.48
CD44-218ENST00000525469 ARL4DP49703 201 aa5.81□□□□□ -1.48
CD44-218ENST00000525469 HDLBPQ00341 1268 aaKnown RBP5.81□□□□□ -1.48
CD44-218ENST00000525469 CACNB2Q08289 660 aaPredicted RBP5.81□□□□□ -1.48
CD44-218ENST00000525469 PABPC4Q13310 644 aaKnown RBP eCLIP5.81□□□□□ -1.48
CD44-218ENST00000525469 NOLC1Q14978 699 aaKnown RBP eCLIP5.81□□□□□ -1.48
CD44-218ENST00000525469 SETDB1Q15047 1291 aa5.81□□□□□ -1.48
CD44-218ENST00000525469 ZKSCAN8Q15776 578 aaPredicted RBP5.81□□□□□ -1.48
CD44-218ENST00000525469 RSPO4Q2I0M5 234 aaPredicted RBP5.81□□□□□ -1.48
CD44-218ENST00000525469 KRT24Q2M2I5 525 aa5.81□□□□□ -1.48
CD44-218ENST00000525469 CCDC184Q52MB2 194 aa5.81□□□□□ -1.48
CD44-218ENST00000525469 PHLDB3Q6NSJ2 640 aa5.81□□□□□ -1.48
CD44-218ENST00000525469 LRSAM1Q6UWE0 723 aa5.81□□□□□ -1.48
CD44-218ENST00000525469 VPS37DQ86XT2 251 aa5.81□□□□□ -1.48
CD44-218ENST00000525469 TMEM130Q8N3G9 435 aa5.81□□□□□ -1.48
CD44-218ENST00000525469 SOCS4Q8WXH5 440 aa5.81□□□□□ -1.48
CD44-218ENST00000525469 UIMC1Q96RL1 719 aa5.81□□□□□ -1.48
CD44-218ENST00000525469 METTL22Q9BUU2 404 aaPredicted RBP5.81□□□□□ -1.48
CD44-218ENST00000525469 C22orf23Q9BZE7 217 aa5.81□□□□□ -1.48
CD44-218ENST00000525469 RWDD1Q9H446 243 aaPredicted RBP5.81□□□□□ -1.48
CD44-218ENST00000525469 PRDM12Q9H4Q4 367 aa5.81□□□□□ -1.48
CD44-218ENST00000525469 DONSONQ9NYP3 566 aa5.81□□□□□ -1.48
CD44-218ENST00000525469 USP25Q9UHP3 1055 aa5.81□□□□□ -1.48
CD44-218ENST00000525469 ZNF112Q9UJU3 913 aa5.81□□□□□ -1.48
CD44-218ENST00000525469 GJD2Q9UKL4 321 aa5.81□□□□□ -1.48
CD44-218ENST00000525469 AGTPBP1Q9UPW5 1226 aa5.81□□□□□ -1.48
CD44-218ENST00000525469 LRRFIP2Q9Y608 721 aaKnown RBP5.81□□□□□ -1.48
CD44-218ENST00000525469 BDP1A6H8Y1 2624 aa5.81□□□□□ -1.48
CD44-218ENST00000525469 MYH13Q9UKX3 1938 aa5.81□□□□□ -1.48
CD44-218ENST00000525469 CACNA1AO00555 2505 aa5.81□□□□□ -1.48
CD44-218ENST00000525469 RPAP1Q9BWH6 1393 aaPredicted RBP5.8□□□□□ -1.48
CD44-218ENST00000525469 MAST3O60307 1309 aa5.8□□□□□ -1.48
CD44-218ENST00000525469 DOCK1Q14185 1865 aa5.8□□□□□ -1.48
CD44-218ENST00000525469 A0A1B0GUL7 405 aa5.8□□□□□ -1.48
CD44-218ENST00000525469 FAM86C2PA6NEL3 165 aa5.8□□□□□ -1.48
CD44-218ENST00000525469 TRIM75PA6NK02 468 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms