RNA–Protein interactions for RNA: ENST00000525045.5

PABPC4-219, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 2

Gene PABPC4, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-219ENST00000525045 HOXA13P31271 388 aaPredicted RBP16.35■□□□□ 0.21
PABPC4-219ENST00000525045 SP2Q02086 613 aa16.35■□□□□ 0.21
PABPC4-219ENST00000525045 SEC23AQ15436 765 aa16.35■□□□□ 0.21
PABPC4-219ENST00000525045 FCHSD1Q86WN1 690 aa16.35■□□□□ 0.21
PABPC4-219ENST00000525045 APBB2Q92870 758 aa16.35■□□□□ 0.21
PABPC4-219ENST00000525045 TOP1MTQ969P6 601 aa16.35■□□□□ 0.21
PABPC4-219ENST00000525045 YME1L1Q96TA2 773 aa16.35■□□□□ 0.21
PABPC4-219ENST00000525045 C17orf80Q9BSJ5 609 aa16.35■□□□□ 0.21
PABPC4-219ENST00000525045 RNPEPQ9H4A4 650 aa16.35■□□□□ 0.21
PABPC4-219ENST00000525045 RIOX1Q9H6W3 641 aa16.35■□□□□ 0.21
PABPC4-219ENST00000525045 H3BNC9 293 aa16.34■□□□□ 0.21
PABPC4-219ENST00000525045 NCK2O43639 380 aa16.34■□□□□ 0.21
PABPC4-219ENST00000525045 LGALS2P05162 132 aa16.34■□□□□ 0.21
PABPC4-219ENST00000525045 SMIM10L2AP0DMW4 78 aa16.34■□□□□ 0.21
PABPC4-219ENST00000525045 SMIM10L2BP0DMW5 78 aa16.34■□□□□ 0.21
PABPC4-219ENST00000525045 HOXC8P31273 242 aa16.34■□□□□ 0.21
PABPC4-219ENST00000525045 SSTR3P32745 418 aaPredicted RBP16.34■□□□□ 0.21
PABPC4-219ENST00000525045 ICAM3P32942 547 aa16.34■□□□□ 0.21
PABPC4-219ENST00000525045 NUCB1Q02818 461 aa16.34■□□□□ 0.21
PABPC4-219ENST00000525045 MKRN4PQ13434 485 aaPredicted RBP16.34■□□□□ 0.21
PABPC4-219ENST00000525045 EPC2Q52LR7 807 aa16.34■□□□□ 0.21
PABPC4-219ENST00000525045 PTCRAQ6ISU1 281 aaPredicted RBP16.34■□□□□ 0.21
PABPC4-219ENST00000525045 HOMER1Q86YM7 354 aa16.34■□□□□ 0.21
PABPC4-219ENST00000525045 PIAS4Q8N2W9 510 aaPredicted RBP16.34■□□□□ 0.21
PABPC4-219ENST00000525045 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.34■□□□□ 0.21
PABPC4-219ENST00000525045 ZNF215Q9UL58 517 aaPredicted RBP16.34■□□□□ 0.21
PABPC4-219ENST00000525045 KAT6AQ92794 2004 aa16.34■□□□□ 0.21
PABPC4-219ENST00000525045 XIRP2A4UGR9 3374 aa16.34■□□□□ 0.21
PABPC4-219ENST00000525045 PNMA6FA0A0J9YX94 578 aa16.33■□□□□ 0.2
PABPC4-219ENST00000525045 GRXCR2A6NFK2 248 aa16.33■□□□□ 0.2
PABPC4-219ENST00000525045 PRR33A8MZF0 331 aa16.33■□□□□ 0.2
PABPC4-219ENST00000525045 TREHO43280 583 aa16.33■□□□□ 0.2
PABPC4-219ENST00000525045 SORBS3O60504 671 aa16.33■□□□□ 0.2
PABPC4-219ENST00000525045 PPP1R11O60927 126 aaPredicted RBP16.33■□□□□ 0.2
PABPC4-219ENST00000525045 GPM6BQ13491 265 aa16.33■□□□□ 0.2
PABPC4-219ENST00000525045 HIC1Q14526 733 aa16.33■□□□□ 0.2
PABPC4-219ENST00000525045 METTL7BQ6UX53 244 aa16.33■□□□□ 0.2
PABPC4-219ENST00000525045 TMEM192Q8IY95 271 aa16.33■□□□□ 0.2
PABPC4-219ENST00000525045 CD320Q9NPF0 282 aa16.33■□□□□ 0.2
PABPC4-219ENST00000525045 BAZ2BQ9UIF8 2168 aaKnown RBP16.33■□□□□ 0.2
PABPC4-219ENST00000525045 GRM4Q14833 912 aa16.32■□□□□ 0.2
PABPC4-219ENST00000525045 SART3Q15020 963 aaKnown RBP16.32■□□□□ 0.2
PABPC4-219ENST00000525045 BANK1Q8NDB2 785 aa16.32■□□□□ 0.2
PABPC4-219ENST00000525045 IL31RAQ8NI17 732 aa16.32■□□□□ 0.2
PABPC4-219ENST00000525045 NEK9Q8TD19 979 aa16.32■□□□□ 0.2
PABPC4-219ENST00000525045 KHSRPQ92945 711 aaKnown RBP eCLIP16.32■□□□□ 0.2
PABPC4-219ENST00000525045 PABPC5Q96DU9 382 aaKnown RBP16.32■□□□□ 0.2
PABPC4-219ENST00000525045 PIGSQ96S52 555 aa16.32■□□□□ 0.2
PABPC4-219ENST00000525045 U3KPZ7 1027 aaPredicted RBP16.32■□□□□ 0.2
PABPC4-219ENST00000525045 SPATA31C2B4DYI2 1134 aa16.31■□□□□ 0.2
PABPC4-219ENST00000525045 IFIT3O14879 490 aaKnown RBP16.31■□□□□ 0.2
PABPC4-219ENST00000525045 FIBPO43427 364 aa16.31■□□□□ 0.2
PABPC4-219ENST00000525045 UPP2O95045 317 aa16.31■□□□□ 0.2
PABPC4-219ENST00000525045 RB1P06400 928 aa16.31■□□□□ 0.2
PABPC4-219ENST00000525045 FAM26DQ5JW98 314 aa16.31■□□□□ 0.2
PABPC4-219ENST00000525045 XRRA1Q6P2D8 792 aa16.31■□□□□ 0.2
PABPC4-219ENST00000525045 CYFIP1Q7L576 1253 aa16.31■□□□□ 0.2
PABPC4-219ENST00000525045 GIMAP8Q8ND71 665 aaPredicted RBP16.31■□□□□ 0.2
PABPC4-219ENST00000525045 RUFY2Q8WXA3 655 aa16.31■□□□□ 0.2
PABPC4-219ENST00000525045 CUL5Q93034 780 aa16.31■□□□□ 0.2
PABPC4-219ENST00000525045 INPP4AQ96PE3 977 aaPredicted RBP16.31■□□□□ 0.2
PABPC4-219ENST00000525045 SENP7Q9BQF6 1050 aa16.31■□□□□ 0.2
PABPC4-219ENST00000525045 NSUN3Q9H649 340 aaKnown RBP16.31■□□□□ 0.2
PABPC4-219ENST00000525045 C11orf16Q9NQ32 467 aa16.31■□□□□ 0.2
PABPC4-219ENST00000525045 PRKAG3Q9UGI9 489 aa16.31■□□□□ 0.2
PABPC4-219ENST00000525045 RWDD3Q9Y3V2 267 aa16.31■□□□□ 0.2
PABPC4-219ENST00000525045 NRCAMQ92823 1304 aa16.3■□□□□ 0.2
PABPC4-219ENST00000525045 FAM86C2PA6NEL3 165 aa16.3■□□□□ 0.2
PABPC4-219ENST00000525045 IL9P15248 144 aa16.3■□□□□ 0.2
PABPC4-219ENST00000525045 WTAPQ15007 396 aa16.3■□□□□ 0.2
PABPC4-219ENST00000525045 CSPP1Q1MSJ5 1256 aa16.3■□□□□ 0.2
PABPC4-219ENST00000525045 CYB5R4Q7L1T6 521 aa16.3■□□□□ 0.2
PABPC4-219ENST00000525045 RSPH3Q86UC2 560 aa16.3■□□□□ 0.2
PABPC4-219ENST00000525045 NLRX1Q86UT6 975 aa16.3■□□□□ 0.2
PABPC4-219ENST00000525045 GPKOWQ92917 476 aaPredicted RBP eCLIP16.3■□□□□ 0.21e-7■□□□□ 9.9
PABPC4-219ENST00000525045 IL17RAQ96F46 866 aa16.3■□□□□ 0.2
PABPC4-219ENST00000525045 GPR20Q99678 358 aa16.3■□□□□ 0.2
PABPC4-219ENST00000525045 IFIH1Q9BYX4 1025 aaKnown RBP16.3■□□□□ 0.2
PABPC4-219ENST00000525045 LMAN2LQ9H0V9 348 aa16.3■□□□□ 0.2
PABPC4-219ENST00000525045 SETD4Q9NVD3 440 aa16.3■□□□□ 0.2
PABPC4-219ENST00000525045 FRMPD4Q14CM0 1322 aa16.29■□□□□ 0.2
PABPC4-219ENST00000525045 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.29■□□□□ 0.2
PABPC4-219ENST00000525045 CTSHP09668 335 aa16.29■□□□□ 0.2
PABPC4-219ENST00000525045 MRPS9P82933 396 aaKnown RBP16.29■□□□□ 0.2
PABPC4-219ENST00000525045 TAF2Q6P1X5 1199 aa16.29■□□□□ 0.2
PABPC4-219ENST00000525045 EP400NLQ6ZTU2 488 aa16.29■□□□□ 0.2
PABPC4-219ENST00000525045 CATIPQ7Z7H3 387 aa16.29■□□□□ 0.2
PABPC4-219ENST00000525045 RALYLQ86SE5 291 aaKnown RBP16.29■□□□□ 0.2
PABPC4-219ENST00000525045 RPAINQ86UA6 219 aa16.29■□□□□ 0.2
PABPC4-219ENST00000525045 FIBCD1Q8N539 461 aa16.29■□□□□ 0.2
PABPC4-219ENST00000525045 SMARCC2Q8TAQ2 1214 aa16.29■□□□□ 0.2
PABPC4-219ENST00000525045 ZFP91Q96JP5 570 aaPredicted RBP16.29■□□□□ 0.2
PABPC4-219ENST00000525045 UPF3BQ9BZI7 483 aaKnown RBP16.29■□□□□ 0.2
PABPC4-219ENST00000525045 RPLP2P05387 115 aaKnown RBP16.28■□□□□ 0.2
PABPC4-219ENST00000525045 ADAM17P78536 824 aa16.28■□□□□ 0.2
PABPC4-219ENST00000525045 ARHGAP4P98171 946 aa16.28■□□□□ 0.2
PABPC4-219ENST00000525045 TCEAL5Q5H9L2 206 aa16.28■□□□□ 0.2
PABPC4-219ENST00000525045 UTP14CQ5TAP6 766 aaKnown RBP16.28■□□□□ 0.2
PABPC4-219ENST00000525045 NCOA7Q8NI08 942 aa16.28■□□□□ 0.2
PABPC4-219ENST00000525045 CDHR1Q96JP9 859 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms