RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 C7orf61Q8IZ16 206 aa5.22□□□□□ -1.57
CHMP4A-202ENST00000524955 ARRDC4Q8NCT1 418 aa5.22□□□□□ -1.57
CHMP4A-202ENST00000524955 KLHDC9Q8NEP7 349 aa5.22□□□□□ -1.57
CHMP4A-202ENST00000524955 LENG9Q96B70 501 aa5.22□□□□□ -1.57
CHMP4A-202ENST00000524955 GPRASP2Q96D09 838 aa5.22□□□□□ -1.57
CHMP4A-202ENST00000524955 GPR20Q99678 358 aa5.22□□□□□ -1.57
CHMP4A-202ENST00000524955 SDF4Q9BRK5 362 aa5.22□□□□□ -1.57
CHMP4A-202ENST00000524955 GLT8D2Q9H1C3 349 aa5.22□□□□□ -1.57
CHMP4A-202ENST00000524955 UPF3AQ9H1J1 476 aaKnown RBP5.22□□□□□ -1.57
CHMP4A-202ENST00000524955 TMEM60Q9H2L4 133 aa5.22□□□□□ -1.57
CHMP4A-202ENST00000524955 UNC45AQ9H3U1 944 aa5.22□□□□□ -1.57
CHMP4A-202ENST00000524955 C11orf49Q9H6J7 331 aa5.22□□□□□ -1.57
CHMP4A-202ENST00000524955 SPC25Q9HBM1 224 aa5.22□□□□□ -1.57
CHMP4A-202ENST00000524955 NRBP1Q9UHY1 535 aa5.22□□□□□ -1.57
CHMP4A-202ENST00000524955 MTMR6Q9Y217 621 aa5.22□□□□□ -1.57
CHMP4A-202ENST00000524955 KIF3AQ9Y496 699 aa5.22□□□□□ -1.57
CHMP4A-202ENST00000524955 PCDHB6Q9Y5E3 794 aa5.22□□□□□ -1.57
CHMP4A-202ENST00000524955 DOCK3Q8IZD9 2030 aa5.22□□□□□ -1.57
CHMP4A-202ENST00000524955 LRRC37A2A6NM11 1700 aa5.22□□□□□ -1.57
CHMP4A-202ENST00000524955 GRIN2DO15399 1336 aa5.22□□□□□ -1.57
CHMP4A-202ENST00000524955 RBBP6Q7Z6E9 1792 aaKnown RBP5.21□□□□□ -1.57
CHMP4A-202ENST00000524955 LOC102724159A0A0B4J2E5 919 aa5.21□□□□□ -1.58
CHMP4A-202ENST00000524955 GSTTP1A0A1W2PQM5 241 aa5.21□□□□□ -1.58
CHMP4A-202ENST00000524955 TMEM150BA6NC51 233 aa5.21□□□□□ -1.58
CHMP4A-202ENST00000524955 PP2D1A8MPX8 630 aa5.21□□□□□ -1.58
CHMP4A-202ENST00000524955 EML1O00423 815 aa5.21□□□□□ -1.58
CHMP4A-202ENST00000524955 DNM1LO00429 736 aa5.21□□□□□ -1.58
CHMP4A-202ENST00000524955 NOP56O00567 594 aaKnown RBP5.21□□□□□ -1.58
CHMP4A-202ENST00000524955 STX6O43752 255 aa5.21□□□□□ -1.58
CHMP4A-202ENST00000524955 PQBP1O60828 265 aaKnown RBP5.21□□□□□ -1.58
CHMP4A-202ENST00000524955 GAS7O60861 476 aa5.21□□□□□ -1.58
CHMP4A-202ENST00000524955 STAM2O75886 525 aa5.21□□□□□ -1.58
CHMP4A-202ENST00000524955 COL6A1P12109 1028 aa5.21□□□□□ -1.58
CHMP4A-202ENST00000524955 U2AF2P26368 475 aaKnown RBP eCLIP5.21□□□□□ -1.58
CHMP4A-202ENST00000524955 CIITAP33076 1130 aa5.21□□□□□ -1.58
CHMP4A-202ENST00000524955 TCF7P36402 384 aaPredicted RBP5.21□□□□□ -1.58
CHMP4A-202ENST00000524955 CPT1AP50416 773 aa5.21□□□□□ -1.58
CHMP4A-202ENST00000524955 USP11P51784 963 aa5.21□□□□□ -1.58
CHMP4A-202ENST00000524955 ACTR2P61160 394 aa5.21□□□□□ -1.58
CHMP4A-202ENST00000524955 IGBP1P78318 339 aa5.21□□□□□ -1.58
CHMP4A-202ENST00000524955 PURAQ00577 322 aaKnown RBP5.21□□□□□ -1.58
CHMP4A-202ENST00000524955 RESTQ13127 1097 aa5.21□□□□□ -1.58
CHMP4A-202ENST00000524955 LAMC2Q13753 1193 aa5.21□□□□□ -1.58
CHMP4A-202ENST00000524955 NEDD9Q14511 834 aa5.21□□□□□ -1.58
CHMP4A-202ENST00000524955 HIC1Q14526 733 aa5.21□□□□□ -1.58
CHMP4A-202ENST00000524955 PWP2Q15269 919 aaKnown RBP5.21□□□□□ -1.58
CHMP4A-202ENST00000524955 UGCGQ16739 394 aa5.21□□□□□ -1.58
CHMP4A-202ENST00000524955 NBPF20Q3BBV1 942 aa5.21□□□□□ -1.58
CHMP4A-202ENST00000524955 TTC38Q5R3I4 469 aa5.21□□□□□ -1.58
CHMP4A-202ENST00000524955 LRCH2Q5VUJ6 765 aa5.21□□□□□ -1.58
CHMP4A-202ENST00000524955 MCTP2Q6DN12 878 aa5.21□□□□□ -1.58
CHMP4A-202ENST00000524955 NCAPH2Q6IBW4 605 aa5.21□□□□□ -1.58
CHMP4A-202ENST00000524955 SWSAP1Q6NVH7 229 aa5.21□□□□□ -1.58
CHMP4A-202ENST00000524955 XRRA1Q6P2D8 792 aa5.21□□□□□ -1.58
CHMP4A-202ENST00000524955 SLC39A5Q6ZMH5 540 aa5.21□□□□□ -1.58
CHMP4A-202ENST00000524955 NECAB2Q7Z6G3 386 aa5.21□□□□□ -1.58
CHMP4A-202ENST00000524955 SH3RF1Q7Z6J0 888 aa5.21□□□□□ -1.58
CHMP4A-202ENST00000524955 UBE2Q1Q7Z7E8 422 aa5.21□□□□□ -1.58
CHMP4A-202ENST00000524955 ETNPPLQ8TBG4 499 aa5.21□□□□□ -1.58
CHMP4A-202ENST00000524955 TRAPPC12Q8WVT3 735 aa5.21□□□□□ -1.58
CHMP4A-202ENST00000524955 DPF3Q92784 378 aa5.21□□□□□ -1.58
CHMP4A-202ENST00000524955 KAT2BQ92831 832 aa5.21□□□□□ -1.58
CHMP4A-202ENST00000524955 HAS1Q92839 578 aa5.21□□□□□ -1.58
CHMP4A-202ENST00000524955 INTS4Q96HW7 963 aaKnown RBP5.21□□□□□ -1.58
CHMP4A-202ENST00000524955 PCYT2Q99447 389 aa5.21□□□□□ -1.58
CHMP4A-202ENST00000524955 SH2D3AQ9BRG2 576 aa5.21□□□□□ -1.58
CHMP4A-202ENST00000524955 MAF1Q9H063 256 aa5.21□□□□□ -1.58
CHMP4A-202ENST00000524955 TRPV6Q9H1D0 765 aa5.21□□□□□ -1.58
CHMP4A-202ENST00000524955 FOXP1Q9H334 677 aaPredicted RBP5.21□□□□□ -1.58
CHMP4A-202ENST00000524955 RNPEPQ9H4A4 650 aa5.21□□□□□ -1.58
CHMP4A-202ENST00000524955 JPH1Q9HDC5 661 aaPredicted RBP5.21□□□□□ -1.58
CHMP4A-202ENST00000524955 STARD7Q9NQZ5 370 aa5.21□□□□□ -1.58
CHMP4A-202ENST00000524955 TFIP11Q9UBB9 837 aaKnown RBP5.21□□□□□ -1.58
CHMP4A-202ENST00000524955 SLC9A2Q9UBY0 812 aa5.21□□□□□ -1.58
CHMP4A-202ENST00000524955 ZMYND8Q9ULU4 1186 aaPredicted RBP5.21□□□□□ -1.58
CHMP4A-202ENST00000524955 RBM19Q9Y4C8 960 aaKnown RBP5.21□□□□□ -1.58
CHMP4A-202ENST00000524955 SAMM50Q9Y512 469 aa5.21□□□□□ -1.58
CHMP4A-202ENST00000524955 CLIC4Q9Y696 253 aa5.21□□□□□ -1.58
CHMP4A-202ENST00000524955 PLXNA1Q9UIW2 1896 aa5.21□□□□□ -1.58
CHMP4A-202ENST00000524955 CYP3A7-CYP3A51PA0A087WV96 503 aa5.2□□□□□ -1.58
CHMP4A-202ENST00000524955 POTEMA6NI47 508 aa5.2□□□□□ -1.58
CHMP4A-202ENST00000524955 A6NJR5 290 aa5.2□□□□□ -1.58
CHMP4A-202ENST00000524955 BACH1O14867 736 aa5.2□□□□□ -1.58
CHMP4A-202ENST00000524955 ZBTB39O15060 712 aa5.2□□□□□ -1.58
CHMP4A-202ENST00000524955 NKRFO15226 690 aaKnown RBP eCLIP5.2□□□□□ -1.58
CHMP4A-202ENST00000524955 NEMFO60524 1076 aa5.2□□□□□ -1.58
CHMP4A-202ENST00000524955 PSMD10O75832 226 aa5.2□□□□□ -1.58
CHMP4A-202ENST00000524955 LGALS2P05162 132 aa5.2□□□□□ -1.58
CHMP4A-202ENST00000524955 TGFB3P10600 412 aa5.2□□□□□ -1.58
CHMP4A-202ENST00000524955 CYP2C9P11712 490 aa5.2□□□□□ -1.58
CHMP4A-202ENST00000524955 CYP3A7P24462 503 aa5.2□□□□□ -1.58
CHMP4A-202ENST00000524955 CST5P28325 142 aaPredicted RBP5.2□□□□□ -1.58
CHMP4A-202ENST00000524955 CDC25AP30304 524 aa5.2□□□□□ -1.58
CHMP4A-202ENST00000524955 TECP42680 631 aa5.2□□□□□ -1.58
CHMP4A-202ENST00000524955 PSEN2P49810 448 aa5.2□□□□□ -1.58
CHMP4A-202ENST00000524955 RTP1P59025 263 aa5.2□□□□□ -1.58
CHMP4A-202ENST00000524955 CYP4A11Q02928 519 aa5.2□□□□□ -1.58
CHMP4A-202ENST00000524955 TLE2Q04725 743 aa5.2□□□□□ -1.58
CHMP4A-202ENST00000524955 GRIN1Q05586 938 aa5.2□□□□□ -1.58
CHMP4A-202ENST00000524955 ITGA7Q13683 1181 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms