RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 SHC4Q6S5L8 630 aa17.85■□□□□ 0.45
TSPAN4-213ENST00000524895 IGSF22Q8N9C0 903 aa17.85■□□□□ 0.45
TSPAN4-213ENST00000524895 FSIP1Q8NA03 581 aa17.85■□□□□ 0.45
TSPAN4-213ENST00000524895 GIMAP8Q8ND71 665 aaPredicted RBP17.85■□□□□ 0.45
TSPAN4-213ENST00000524895 RAET1EQ8TD07 263 aa17.85■□□□□ 0.45
TSPAN4-213ENST00000524895 MRPS27Q92552 414 aaKnown RBP17.85■□□□□ 0.45
TSPAN4-213ENST00000524895 KATNBL1Q9H079 304 aa17.85■□□□□ 0.45
TSPAN4-213ENST00000524895 FAM13BQ9NYF5 915 aa17.85■□□□□ 0.45
TSPAN4-213ENST00000524895 LRWD1Q9UFC0 647 aa17.85■□□□□ 0.45
TSPAN4-213ENST00000524895 NFASCO94856 1347 aa17.84■□□□□ 0.45
TSPAN4-213ENST00000524895 CHMP2AO43633 222 aa17.84■□□□□ 0.45
TSPAN4-213ENST00000524895 UBA1P22314 1058 aaKnown RBP17.84■□□□□ 0.45
TSPAN4-213ENST00000524895 CMA1P23946 247 aa17.84■□□□□ 0.45
TSPAN4-213ENST00000524895 PRMT2P55345 433 aa17.84■□□□□ 0.45
TSPAN4-213ENST00000524895 PPP2R5CQ13362 524 aa17.84■□□□□ 0.45
TSPAN4-213ENST00000524895 PDIA5Q14554 519 aa17.84■□□□□ 0.45
TSPAN4-213ENST00000524895 RESP18Q5W5W9 173 aa17.84■□□□□ 0.45
TSPAN4-213ENST00000524895 TRIB2Q92519 343 aa17.84■□□□□ 0.45
TSPAN4-213ENST00000524895 SYMPKQ92797 1274 aaKnown RBP17.84■□□□□ 0.45
TSPAN4-213ENST00000524895 SENP7Q9BQF6 1050 aa17.84■□□□□ 0.45
TSPAN4-213ENST00000524895 PDGFCQ9NRA1 345 aa17.84■□□□□ 0.45
TSPAN4-213ENST00000524895 TRIM17Q9Y577 477 aa17.84■□□□□ 0.45
TSPAN4-213ENST00000524895 CEP350Q5VT06 3117 aa17.83■□□□□ 0.45
TSPAN4-213ENST00000524895 PP2D1A8MPX8 630 aa17.83■□□□□ 0.44
TSPAN4-213ENST00000524895 DHX15O43143 795 aaKnown RBP17.83■□□□□ 0.44
TSPAN4-213ENST00000524895 TXNP10599 105 aaKnown RBP17.83■□□□□ 0.44
TSPAN4-213ENST00000524895 UBA7P41226 1012 aa17.83■□□□□ 0.44
TSPAN4-213ENST00000524895 KRT76Q01546 638 aa17.83■□□□□ 0.44
TSPAN4-213ENST00000524895 SPIRE1Q08AE8 756 aa17.83■□□□□ 0.44
TSPAN4-213ENST00000524895 NEDD9Q14511 834 aa17.83■□□□□ 0.44
TSPAN4-213ENST00000524895 TAPT1Q6NXT6 567 aa17.83■□□□□ 0.44
TSPAN4-213ENST00000524895 CCDC73Q6ZRK6 1079 aa17.83■□□□□ 0.44
TSPAN4-213ENST00000524895 OTOP1Q7RTM1 612 aa17.83■□□□□ 0.44
TSPAN4-213ENST00000524895 ERMNQ8TAM6 284 aa17.83■□□□□ 0.44
TSPAN4-213ENST00000524895 UNC45AQ9H3U1 944 aa17.83■□□□□ 0.44
TSPAN4-213ENST00000524895 JPH1Q9HDC5 661 aaPredicted RBP17.83■□□□□ 0.44
TSPAN4-213ENST00000524895 DDX41Q9UJV9 622 aaKnown RBP17.83■□□□□ 0.44
TSPAN4-213ENST00000524895 PCNTO95613 3336 aa17.83■□□□□ 0.44
TSPAN4-213ENST00000524895 A0A1B0GVL5 298 aa17.82■□□□□ 0.44
TSPAN4-213ENST00000524895 RBM47A0AV96 593 aaKnown RBP17.82■□□□□ 0.44
TSPAN4-213ENST00000524895 ADCY3O60266 1144 aa17.82■□□□□ 0.44
TSPAN4-213ENST00000524895 SORBS3O60504 671 aa17.82■□□□□ 0.44
TSPAN4-213ENST00000524895 ARIH2O95376 493 aa17.82■□□□□ 0.44
TSPAN4-213ENST00000524895 GGPS1O95749 300 aa17.82■□□□□ 0.44
TSPAN4-213ENST00000524895 MBD3O95983 291 aa17.82■□□□□ 0.44
TSPAN4-213ENST00000524895 IGHA2P01877 340 aa17.82■□□□□ 0.44
TSPAN4-213ENST00000524895 PFKFB1P16118 471 aa17.82■□□□□ 0.44
TSPAN4-213ENST00000524895 ADCYAP1R1P41586 468 aa17.82■□□□□ 0.44
TSPAN4-213ENST00000524895 SP2Q02086 613 aa17.82■□□□□ 0.44
TSPAN4-213ENST00000524895 LY6KQ17RY6 165 aa17.82■□□□□ 0.44
TSPAN4-213ENST00000524895 KRT79Q5XKE5 535 aa17.82■□□□□ 0.44
TSPAN4-213ENST00000524895 CCDC62Q6P9F0 684 aa17.82■□□□□ 0.44
TSPAN4-213ENST00000524895 CYFIP1Q7L576 1253 aa17.82■□□□□ 0.44
TSPAN4-213ENST00000524895 RASSF8Q8NHQ8 419 aa17.82■□□□□ 0.44
TSPAN4-213ENST00000524895 EPSTI1Q96J88 318 aa17.82■□□□□ 0.44
TSPAN4-213ENST00000524895 SLC9A2Q9UBY0 812 aa17.82■□□□□ 0.44
TSPAN4-213ENST00000524895 NRBP1Q9UHY1 535 aa17.82■□□□□ 0.44
TSPAN4-213ENST00000524895 STK24Q9Y6E0 443 aa17.82■□□□□ 0.44
TSPAN4-213ENST00000524895 ELNP15502 786 aa17.81■□□□□ 0.44
TSPAN4-213ENST00000524895 CDC25AP30304 524 aa17.81■□□□□ 0.44
TSPAN4-213ENST00000524895 SP4Q02446 784 aa17.81■□□□□ 0.44
TSPAN4-213ENST00000524895 CCDC144BQ3MJ40 725 aa17.81■□□□□ 0.44
TSPAN4-213ENST00000524895 PRAMEF19Q5SWL8 479 aa17.81■□□□□ 0.44
TSPAN4-213ENST00000524895 HAUS3Q68CZ6 603 aa17.81■□□□□ 0.44
TSPAN4-213ENST00000524895 ZNF746Q6NUN9 644 aaPredicted RBP17.81■□□□□ 0.44
TSPAN4-213ENST00000524895 USP49Q70CQ1 688 aa17.81■□□□□ 0.44
TSPAN4-213ENST00000524895 MIER3Q7Z3K6 550 aa17.81■□□□□ 0.44
TSPAN4-213ENST00000524895 CABP7Q86V35 215 aa17.81■□□□□ 0.44
TSPAN4-213ENST00000524895 SNX29Q8TEQ0 813 aa17.81■□□□□ 0.44
TSPAN4-213ENST00000524895 GOLPH3LQ9H4A5 285 aa17.81■□□□□ 0.44
TSPAN4-213ENST00000524895 MLXIPQ9HAP2 919 aa17.81■□□□□ 0.44
TSPAN4-213ENST00000524895 SAMM50Q9Y512 469 aa17.81■□□□□ 0.44
TSPAN4-213ENST00000524895 WDR64B1ANS9 1081 aa17.8■□□□□ 0.44
TSPAN4-213ENST00000524895 FOXN1O15353 648 aa17.8■□□□□ 0.44
TSPAN4-213ENST00000524895 FARP2O94887 1054 aaPredicted RBP17.8■□□□□ 0.44
TSPAN4-213ENST00000524895 HMGCRP04035 888 aa17.8■□□□□ 0.44
TSPAN4-213ENST00000524895 ZNF865P0CJ78 1059 aaPredicted RBP17.8■□□□□ 0.44
TSPAN4-213ENST00000524895 HSPA8P11142 646 aaKnown RBP17.8■□□□□ 0.44
TSPAN4-213ENST00000524895 SFNP31947 248 aa17.8■□□□□ 0.44
TSPAN4-213ENST00000524895 NDUFA8P51970 172 aa17.8■□□□□ 0.44
TSPAN4-213ENST00000524895 JAK3P52333 1124 aa17.8■□□□□ 0.44
TSPAN4-213ENST00000524895 ZRSR1Q15695 479 aaKnown RBP17.8■□□□□ 0.44
TSPAN4-213ENST00000524895 CELF3Q5SZQ8 465 aaKnown RBP17.8■□□□□ 0.44
TSPAN4-213ENST00000524895 IQSEC1Q6DN90 963 aa17.8■□□□□ 0.44
TSPAN4-213ENST00000524895 METTL7BQ6UX53 244 aa17.8■□□□□ 0.44
TSPAN4-213ENST00000524895 B3GNT9Q6UX72 402 aa17.8■□□□□ 0.44
TSPAN4-213ENST00000524895 DHX37Q8IY37 1157 aaKnown RBP17.8■□□□□ 0.44
TSPAN4-213ENST00000524895 SMAP1Q8IYB5 467 aaPredicted RBP17.8■□□□□ 0.44
TSPAN4-213ENST00000524895 SLAIN1Q8ND83 568 aa17.8■□□□□ 0.44
TSPAN4-213ENST00000524895 PXYLP1Q8TE99 480 aa17.8■□□□□ 0.44
TSPAN4-213ENST00000524895 CDK5RAP3Q96JB5 506 aa17.8■□□□□ 0.44
TSPAN4-213ENST00000524895 CCDC39Q9UFE4 941 aa17.8■□□□□ 0.44
TSPAN4-213ENST00000524895 KCNH3Q9ULD8 1083 aa17.8■□□□□ 0.44
TSPAN4-213ENST00000524895 KDM3AQ9Y4C1 1321 aa17.79■□□□□ 0.44
TSPAN4-213ENST00000524895 FAM237AA0A1B0GTK4 181 aa17.79■□□□□ 0.44
TSPAN4-213ENST00000524895 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.79■□□□□ 0.44
TSPAN4-213ENST00000524895 EML1O00423 815 aa17.79■□□□□ 0.44
TSPAN4-213ENST00000524895 NKRFO15226 690 aaKnown RBP eCLIP17.79■□□□□ 0.442e-6■■■□□ 15.4
TSPAN4-213ENST00000524895 CCNE2O96020 404 aa17.79■□□□□ 0.44
TSPAN4-213ENST00000524895 GH1P01241 217 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms