RNA–Protein interactions for RNA: ENST00000524797.1

TRAPPC4-204, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,924 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-204ENST00000524797 SENP7Q9BQF6 1050 aa12.8□□□□□ -0.36
TRAPPC4-204ENST00000524797 MTIF3Q9H2K0 278 aaKnown RBP12.8□□□□□ -0.36
TRAPPC4-204ENST00000524797 TTYH1Q9H313 450 aaPredicted RBP12.8□□□□□ -0.36
TRAPPC4-204ENST00000524797 ZSWIM6Q9HCJ5 1215 aa12.8□□□□□ -0.36
TRAPPC4-204ENST00000524797 TSHZ2Q9NRE2 1034 aa12.8□□□□□ -0.36
TRAPPC4-204ENST00000524797 BARHL2Q9NY43 387 aa12.8□□□□□ -0.36
TRAPPC4-204ENST00000524797 CXXC1Q9P0U4 656 aaPredicted RBP12.8□□□□□ -0.36
TRAPPC4-204ENST00000524797 STXBP5LQ9Y2K9 1186 aa12.8□□□□□ -0.36
TRAPPC4-204ENST00000524797 TELO2Q9Y4R8 837 aa12.8□□□□□ -0.36
TRAPPC4-204ENST00000524797 TMEM265A0A087WTH1 108 aa12.8□□□□□ -0.36
TRAPPC4-204ENST00000524797 SMCO2A6NFE2 343 aa12.8□□□□□ -0.36
TRAPPC4-204ENST00000524797 GRXCR1A8MXD5 290 aa12.8□□□□□ -0.36
TRAPPC4-204ENST00000524797 NOP56O00567 594 aaKnown RBP12.8□□□□□ -0.36
TRAPPC4-204ENST00000524797 PFKMP08237 780 aa12.8□□□□□ -0.36
TRAPPC4-204ENST00000524797 ITGB5P18084 799 aa12.8□□□□□ -0.36
TRAPPC4-204ENST00000524797 PFKFB3Q16875 520 aaPredicted RBP12.8□□□□□ -0.36
TRAPPC4-204ENST00000524797 RUFY3Q7L099 469 aa12.8□□□□□ -0.36
TRAPPC4-204ENST00000524797 OTOP2Q7RTS6 562 aa12.8□□□□□ -0.36
TRAPPC4-204ENST00000524797 DEFB128Q7Z7B8 93 aa12.8□□□□□ -0.36
TRAPPC4-204ENST00000524797 CAGE1Q8TC20 777 aa12.8□□□□□ -0.36
TRAPPC4-204ENST00000524797 ATP9AO75110 1047 aa12.79□□□□□ -0.36
TRAPPC4-204ENST00000524797 KCNA2P16389 499 aa12.79□□□□□ -0.36
TRAPPC4-204ENST00000524797 EVCP57679 992 aa12.79□□□□□ -0.36
TRAPPC4-204ENST00000524797 RBL2Q08999 1139 aa12.79□□□□□ -0.36
TRAPPC4-204ENST00000524797 PTK7Q13308 1070 aa12.79□□□□□ -0.36
TRAPPC4-204ENST00000524797 HIC1Q14526 733 aa12.79□□□□□ -0.36
TRAPPC4-204ENST00000524797 GIMAP8Q8ND71 665 aaPredicted RBP12.79□□□□□ -0.36
TRAPPC4-204ENST00000524797 AFAP1L1Q8TED9 768 aa12.79□□□□□ -0.36
TRAPPC4-204ENST00000524797 CDHR1Q96JP9 859 aa12.79□□□□□ -0.36
TRAPPC4-204ENST00000524797 PGBD1Q96JS3 809 aa12.79□□□□□ -0.36
TRAPPC4-204ENST00000524797 GLT8D2Q9H1C3 349 aa12.79□□□□□ -0.36
TRAPPC4-204ENST00000524797 JADE2Q9NQC1 790 aa12.79□□□□□ -0.36
TRAPPC4-204ENST00000524797 TMEM260Q9NX78 707 aa12.79□□□□□ -0.36
TRAPPC4-204ENST00000524797 H3BRB1 525 aa12.78□□□□□ -0.36
TRAPPC4-204ENST00000524797 PRPF3O43395 683 aaKnown RBP12.78□□□□□ -0.36
TRAPPC4-204ENST00000524797 FOSP01100 380 aaPredicted RBP12.78□□□□□ -0.36
TRAPPC4-204ENST00000524797 SCG2P13521 617 aa12.78□□□□□ -0.36
TRAPPC4-204ENST00000524797 DNAJB2P25686 324 aa12.78□□□□□ -0.36
TRAPPC4-204ENST00000524797 CLK2P49760 499 aaKnown RBP12.78□□□□□ -0.36
TRAPPC4-204ENST00000524797 ZNF200P98182 395 aaPredicted RBP12.78□□□□□ -0.36
TRAPPC4-204ENST00000524797 TOB2Q14106 344 aaPredicted RBP12.78□□□□□ -0.36
TRAPPC4-204ENST00000524797 TRIM71Q2Q1W2 868 aaKnown RBP12.78□□□□□ -0.36
TRAPPC4-204ENST00000524797 ANO3Q9BYT9 981 aa12.78□□□□□ -0.36
TRAPPC4-204ENST00000524797 TM6SF1Q9BZW5 370 aa12.78□□□□□ -0.36
TRAPPC4-204ENST00000524797 TUT1Q9H6E5 874 aaKnown RBP12.78□□□□□ -0.36
TRAPPC4-204ENST00000524797 CYP46A1Q9Y6A2 500 aa12.78□□□□□ -0.36
TRAPPC4-204ENST00000524797 SMIM10L2AP0DMW4 78 aa12.78□□□□□ -0.36
TRAPPC4-204ENST00000524797 SMIM10L2BP0DMW5 78 aa12.78□□□□□ -0.36
TRAPPC4-204ENST00000524797 SELPP16109 830 aa12.78□□□□□ -0.36
TRAPPC4-204ENST00000524797 PDIA3P30101 505 aaKnown RBP12.78□□□□□ -0.36
TRAPPC4-204ENST00000524797 PBX2P40425 430 aa12.78□□□□□ -0.36
TRAPPC4-204ENST00000524797 AP3B2Q13367 1082 aa12.78□□□□□ -0.36
TRAPPC4-204ENST00000524797 NTRK3Q16288 839 aa12.78□□□□□ -0.36
TRAPPC4-204ENST00000524797 PKN1Q16512 942 aa12.78□□□□□ -0.36
TRAPPC4-204ENST00000524797 UTP14CQ5TAP6 766 aaKnown RBP12.78□□□□□ -0.36
TRAPPC4-204ENST00000524797 LRRC8DQ7L1W4 858 aa12.78□□□□□ -0.36
TRAPPC4-204ENST00000524797 WNT8BQ93098 351 aa12.78□□□□□ -0.36
TRAPPC4-204ENST00000524797 TIFAQ96CG3 184 aa12.78□□□□□ -0.36
TRAPPC4-204ENST00000524797 MXRA8Q9BRK3 442 aa12.78□□□□□ -0.36
TRAPPC4-204ENST00000524797 PBX4Q9BYU1 374 aa12.78□□□□□ -0.36
TRAPPC4-204ENST00000524797 PKD2L1Q9P0L9 805 aa12.78□□□□□ -0.36
TRAPPC4-204ENST00000524797 ESYT2A0FGR8 921 aa12.77□□□□□ -0.37
TRAPPC4-204ENST00000524797 CKBP12277 381 aa12.77□□□□□ -0.37
TRAPPC4-204ENST00000524797 ACTN1P12814 892 aa12.77□□□□□ -0.37
TRAPPC4-204ENST00000524797 HOXC8P31273 242 aa12.77□□□□□ -0.37
TRAPPC4-204ENST00000524797 SP4Q02446 784 aa12.77□□□□□ -0.37
TRAPPC4-204ENST00000524797 MTMR1Q13613 665 aa12.77□□□□□ -0.37
TRAPPC4-204ENST00000524797 RAB30Q15771 203 aa12.77□□□□□ -0.37
TRAPPC4-204ENST00000524797 TRIM50Q86XT4 487 aa12.77□□□□□ -0.37
TRAPPC4-204ENST00000524797 PHKBQ93100 1093 aa12.77□□□□□ -0.37
TRAPPC4-204ENST00000524797 CDX2Q99626 313 aaPredicted RBP12.77□□□□□ -0.37
TRAPPC4-204ENST00000524797 SLC4A7Q9Y6M7 1214 aa12.77□□□□□ -0.37
TRAPPC4-204ENST00000524797 GSTTP1A0A1W2PQM5 241 aa12.76□□□□□ -0.37
TRAPPC4-204ENST00000524797 C17orf102A2RUQ5 167 aa12.76□□□□□ -0.37
TRAPPC4-204ENST00000524797 ZBBXA8MT70 800 aa12.76□□□□□ -0.37
TRAPPC4-204ENST00000524797 ADAMTS3O15072 1205 aa12.76□□□□□ -0.37
TRAPPC4-204ENST00000524797 IFNAR1P17181 557 aa12.76□□□□□ -0.37
TRAPPC4-204ENST00000524797 SREBF1P36956 1147 aa12.76□□□□□ -0.37
TRAPPC4-204ENST00000524797 CCT2P78371 535 aaKnown RBP12.76□□□□□ -0.37
TRAPPC4-204ENST00000524797 GPNMBQ14956 572 aa12.76□□□□□ -0.37
TRAPPC4-204ENST00000524797 RNF26Q9BY78 433 aaPredicted RBP12.76□□□□□ -0.37
TRAPPC4-204ENST00000524797 FTOQ9C0B1 505 aaKnown RBP eCLIP12.76□□□□□ -0.37
TRAPPC4-204ENST00000524797 NCOA5Q9HCD5 579 aaKnown RBP12.76□□□□□ -0.37
TRAPPC4-204ENST00000524797 WDR81Q562E7 1941 aa12.76□□□□□ -0.37
TRAPPC4-204ENST00000524797 MICAL3Q7RTP6 2002 aa12.76□□□□□ -0.37
TRAPPC4-204ENST00000524797 SZT2Q5T011 3432 aa12.76□□□□□ -0.37
TRAPPC4-204ENST00000524797 SIP14410 1827 aa12.76□□□□□ -0.37
TRAPPC4-204ENST00000524797 MAFGO15525 162 aa12.76□□□□□ -0.37
TRAPPC4-204ENST00000524797 TCF7P36402 384 aaPredicted RBP12.76□□□□□ -0.37
TRAPPC4-204ENST00000524797 AKAP17AQ02040 695 aaKnown RBP12.76□□□□□ -0.37
TRAPPC4-204ENST00000524797 JAKMIP3Q5VZ66 844 aa12.76□□□□□ -0.37
TRAPPC4-204ENST00000524797 TRAF7Q6Q0C0 670 aa12.76□□□□□ -0.37
TRAPPC4-204ENST00000524797 SERINC5Q86VE9 423 aa12.76□□□□□ -0.37
TRAPPC4-204ENST00000524797 CYP2W1Q8TAV3 490 aa12.76□□□□□ -0.37
TRAPPC4-204ENST00000524797 MYLIPQ8WY64 445 aa12.76□□□□□ -0.37
TRAPPC4-204ENST00000524797 SLC26A6Q9BXS9 759 aa12.76□□□□□ -0.37
TRAPPC4-204ENST00000524797 UPF3BQ9BZI7 483 aaKnown RBP12.76□□□□□ -0.37
TRAPPC4-204ENST00000524797 ZMYND12Q9H0C1 365 aa12.76□□□□□ -0.37
TRAPPC4-204ENST00000524797 MSRAQ9UJ68 235 aa12.76□□□□□ -0.37
TRAPPC4-204ENST00000524797 ZNF215Q9UL58 517 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms