RNA–Protein interactions for RNA: ENST00000524141.5

SPIDR-225, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,761 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-225ENST00000524141 SLC12A6Q9UHW9 1150 aa11.28□□□□□ -0.6
SPIDR-225ENST00000524141 NIP7Q9Y221 180 aaKnown RBP eCLIP11.28□□□□□ -0.6
SPIDR-225ENST00000524141 MYH4Q9Y623 1939 aa11.28□□□□□ -0.6
SPIDR-225ENST00000524141 PAEPP09466 180 aa11.27□□□□□ -0.61
SPIDR-225ENST00000524141 CTNNA1P35221 906 aaKnown RBP11.27□□□□□ -0.61
SPIDR-225ENST00000524141 FXR2P51116 673 aaKnown RBP eCLIP11.27□□□□□ -0.61
SPIDR-225ENST00000524141 DNA2P51530 1060 aa11.27□□□□□ -0.61
SPIDR-225ENST00000524141 SOGA3Q5TF21 947 aa11.27□□□□□ -0.61
SPIDR-225ENST00000524141 BRINP3Q76B58 766 aa11.27□□□□□ -0.61
SPIDR-225ENST00000524141 TMC4Q7Z404 712 aa11.27□□□□□ -0.61
SPIDR-225ENST00000524141 MYOCDQ8IZQ8 938 aa11.27□□□□□ -0.61
SPIDR-225ENST00000524141 TBC1D5Q92609 795 aa11.27□□□□□ -0.61
SPIDR-225ENST00000524141 CEP63Q96MT8 703 aa11.27□□□□□ -0.61
SPIDR-225ENST00000524141 CENPHQ9H3R5 247 aa11.27□□□□□ -0.61
SPIDR-225ENST00000524141 MKNK2Q9HBH9 465 aa11.27□□□□□ -0.61
SPIDR-225ENST00000524141 SLC40A1Q9NP59 571 aa11.27□□□□□ -0.61
SPIDR-225ENST00000524141 DONSONQ9NYP3 566 aa11.27□□□□□ -0.61
SPIDR-225ENST00000524141 ROBO3Q96MS0 1386 aa11.27□□□□□ -0.61
SPIDR-225ENST00000524141 TLR2O60603 784 aa11.27□□□□□ -0.61
SPIDR-225ENST00000524141 CAMTA2O94983 1202 aa11.27□□□□□ -0.61
SPIDR-225ENST00000524141 TSPY3P0CV98 308 aa11.27□□□□□ -0.61
SPIDR-225ENST00000524141 TSPY8P0CW00 308 aa11.27□□□□□ -0.61
SPIDR-225ENST00000524141 MMP14P50281 582 aa11.27□□□□□ -0.61
SPIDR-225ENST00000524141 POLR2FP61218 127 aaKnown RBP11.27□□□□□ -0.61
SPIDR-225ENST00000524141 ATP2B2Q01814 1243 aa11.27□□□□□ -0.61
SPIDR-225ENST00000524141 IFFO1Q0D2I5 559 aa11.27□□□□□ -0.61
SPIDR-225ENST00000524141 SNCBQ16143 134 aa11.27□□□□□ -0.61
SPIDR-225ENST00000524141 C12orf60Q5U649 245 aa11.27□□□□□ -0.61
SPIDR-225ENST00000524141 DYMQ7RTS9 669 aa11.27□□□□□ -0.61
SPIDR-225ENST00000524141 FBXO33Q7Z6M2 555 aa11.27□□□□□ -0.61
SPIDR-225ENST00000524141 KLHL7Q8IXQ5 586 aa11.27□□□□□ -0.61
SPIDR-225ENST00000524141 MAGEC3Q8TD91 643 aa11.27□□□□□ -0.61
SPIDR-225ENST00000524141 ACTRT1Q8TDG2 376 aa11.27□□□□□ -0.61
SPIDR-225ENST00000524141 POLD4Q9HCU8 107 aa11.27□□□□□ -0.61
SPIDR-225ENST00000524141 CCDC87Q9NVE4 849 aa11.27□□□□□ -0.61
SPIDR-225ENST00000524141 AIPL1Q9NZN9 384 aa11.27□□□□□ -0.61
SPIDR-225ENST00000524141 SMCO2A6NFE2 343 aa11.26□□□□□ -0.61
SPIDR-225ENST00000524141 H0YGN5 161 aa11.26□□□□□ -0.61
SPIDR-225ENST00000524141 CCDC188H7C350 402 aa11.26□□□□□ -0.61
SPIDR-225ENST00000524141 KCNK3O14649 394 aa11.26□□□□□ -0.61
SPIDR-225ENST00000524141 NOL4O94818 638 aa11.26□□□□□ -0.61
SPIDR-225ENST00000524141 USP11P51784 963 aa11.26□□□□□ -0.61
SPIDR-225ENST00000524141 ERVK-9P63128 1117 aa11.26□□□□□ -0.61
SPIDR-225ENST00000524141 KLHL30Q0D2K2 578 aa11.26□□□□□ -0.61
SPIDR-225ENST00000524141 SLC35G1Q2M3R5 365 aa11.26□□□□□ -0.61
SPIDR-225ENST00000524141 ODF2Q5BJF6 829 aa11.26□□□□□ -0.61
SPIDR-225ENST00000524141 CACNA2D3Q8IZS8 1091 aa11.26□□□□□ -0.61
SPIDR-225ENST00000524141 REXO1Q8N1G1 1221 aaKnown RBP11.26□□□□□ -0.61
SPIDR-225ENST00000524141 TBCKQ8TEA7 893 aa11.26□□□□□ -0.61
SPIDR-225ENST00000524141 RAD54LQ92698 747 aa11.26□□□□□ -0.61
SPIDR-225ENST00000524141 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.26□□□□□ -0.61
SPIDR-225ENST00000524141 LSM14BQ9BX40 385 aaKnown RBP11.26□□□□□ -0.61
SPIDR-225ENST00000524141 SEC63Q9UGP8 760 aaKnown RBP11.26□□□□□ -0.61
SPIDR-225ENST00000524141 SWAP70Q9UH65 585 aa11.26□□□□□ -0.61
SPIDR-225ENST00000524141 DDX20Q9UHI6 824 aaKnown RBP11.26□□□□□ -0.61
SPIDR-225ENST00000524141 NFS1Q9Y697 457 aa11.26□□□□□ -0.61
SPIDR-225ENST00000524141 C5orf60A6NFR6 353 aa11.26□□□□□ -0.61
SPIDR-225ENST00000524141 KLRF2D3W0D1 207 aa11.26□□□□□ -0.61
SPIDR-225ENST00000524141 NF2P35240 595 aa11.26□□□□□ -0.61
SPIDR-225ENST00000524141 TXKP42681 527 aa11.26□□□□□ -0.61
SPIDR-225ENST00000524141 PPP2R2AP63151 447 aa11.26□□□□□ -0.61
SPIDR-225ENST00000524141 ZNF844Q08AG5 666 aa11.26□□□□□ -0.61
SPIDR-225ENST00000524141 PDIA5Q14554 519 aa11.26□□□□□ -0.61
SPIDR-225ENST00000524141 ASIC2Q16515 512 aa11.26□□□□□ -0.61
SPIDR-225ENST00000524141 CALCRLQ16602 461 aa11.26□□□□□ -0.61
SPIDR-225ENST00000524141 ZCWPW2Q504Y3 356 aa11.26□□□□□ -0.61
SPIDR-225ENST00000524141 WLSQ5T9L3 541 aa11.26□□□□□ -0.61
SPIDR-225ENST00000524141 SCFD2Q8WU76 684 aa11.26□□□□□ -0.61
SPIDR-225ENST00000524141 SGSM3Q96HU1 749 aa11.26□□□□□ -0.61
SPIDR-225ENST00000524141 CD248Q9HCU0 757 aa11.26□□□□□ -0.61
SPIDR-225ENST00000524141 A0A087X0T9 212 aa11.25□□□□□ -0.61
SPIDR-225ENST00000524141 ESYT2A0FGR8 921 aa11.25□□□□□ -0.61
SPIDR-225ENST00000524141 PGRMC1O00264 195 aaKnown RBP11.25□□□□□ -0.61
SPIDR-225ENST00000524141 TRAF5O00463 557 aa11.25□□□□□ -0.61
SPIDR-225ENST00000524141 KIF4AO95239 1232 aa11.25□□□□□ -0.61
SPIDR-225ENST00000524141 FAM228BP0C875 321 aa11.25□□□□□ -0.61
SPIDR-225ENST00000524141 ECHS1P30084 290 aa11.25□□□□□ -0.61
SPIDR-225ENST00000524141 MARSP56192 900 aaKnown RBP11.25□□□□□ -0.61
SPIDR-225ENST00000524141 RAPGEF1Q13905 1077 aa11.25□□□□□ -0.61
SPIDR-225ENST00000524141 KRT79Q5XKE5 535 aa11.25□□□□□ -0.61
SPIDR-225ENST00000524141 GPIHBP1Q8IV16 184 aa11.25□□□□□ -0.61
SPIDR-225ENST00000524141 PARP9Q8IXQ6 854 aa11.25□□□□□ -0.61
SPIDR-225ENST00000524141 DDX12PQ92771 950 aa11.25□□□□□ -0.61
SPIDR-225ENST00000524141 MTMR9Q96QG7 549 aa11.25□□□□□ -0.61
SPIDR-225ENST00000524141 CNOT10Q9H9A5 744 aaKnown RBP11.25□□□□□ -0.61
SPIDR-225ENST00000524141 MCM8Q9UJA3 840 aa11.25□□□□□ -0.61
SPIDR-225ENST00000524141 ZNF652Q9Y2D9 606 aa11.25□□□□□ -0.61
SPIDR-225ENST00000524141 CEP83Q9Y592 693 aa11.25□□□□□ -0.61
SPIDR-225ENST00000524141 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.25□□□□□ -0.61
SPIDR-225ENST00000524141 BZW2Q9Y6E2 419 aaKnown RBP11.25□□□□□ -0.61
SPIDR-225ENST00000524141 ATP8B3O60423 1300 aa11.25□□□□□ -0.61
SPIDR-225ENST00000524141 BHMG1C9JSJ3 638 aaPredicted RBP11.25□□□□□ -0.61
SPIDR-225ENST00000524141 hCG_1984214I3L0E3 225 aa11.25□□□□□ -0.61
SPIDR-225ENST00000524141 ZPR1O75312 459 aa11.25□□□□□ -0.61
SPIDR-225ENST00000524141 USP17L8P0C7I0 530 aa11.25□□□□□ -0.61
SPIDR-225ENST00000524141 SMARCA1P28370 1054 aa11.25□□□□□ -0.61
SPIDR-225ENST00000524141 SLC8A1P32418 973 aa11.25□□□□□ -0.61
SPIDR-225ENST00000524141 EPS15P42566 896 aa11.25□□□□□ -0.61
SPIDR-225ENST00000524141 LACTB2Q53H82 288 aaPredicted RBP11.25□□□□□ -0.61
SPIDR-225ENST00000524141 ANKRD20A8PQ5CZ79 823 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms