RNA–Protein interactions for RNA: ENST00000524126.5

SPIDR-224, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 1 (best)

Gene SPIDR, Length 2,614 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-224ENST00000524126 KLHL29Q96CT2 875 aa11.17□□□□□ -0.62
SPIDR-224ENST00000524126 PSMD1Q99460 953 aa11.17□□□□□ -0.62
SPIDR-224ENST00000524126 MTRQ99707 1265 aa11.17□□□□□ -0.62
SPIDR-224ENST00000524126 DDX21Q9NR30 783 aaKnown RBP eCLIP11.17□□□□□ -0.62
SPIDR-224ENST00000524126 ARHGAP20Q9P2F6 1191 aa11.17□□□□□ -0.62
SPIDR-224ENST00000524126 STK36Q9NRP7 1315 aa11.17□□□□□ -0.62
SPIDR-224ENST00000524126 A0A1W2PQC6 194 aa11.16□□□□□ -0.62
SPIDR-224ENST00000524126 HOXB7P09629 217 aa11.16□□□□□ -0.62
SPIDR-224ENST00000524126 SNRPA1P09661 255 aaKnown RBP11.16□□□□□ -0.62
SPIDR-224ENST00000524126 EIF4A3P38919 411 aaKnown RBP11.16□□□□□ -0.62
SPIDR-224ENST00000524126 SSRP1Q08945 709 aaKnown RBP11.16□□□□□ -0.62
SPIDR-224ENST00000524126 RILPL1Q5EBL4 403 aa11.16□□□□□ -0.62
SPIDR-224ENST00000524126 FOXB2Q5VYV0 432 aa11.16□□□□□ -0.62
SPIDR-224ENST00000524126 PTF1AQ7RTS3 328 aa11.16□□□□□ -0.62
SPIDR-224ENST00000524126 SLC4A9Q96Q91 983 aa11.16□□□□□ -0.62
SPIDR-224ENST00000524126 INCENPQ9NQS7 918 aa11.16□□□□□ -0.62
SPIDR-224ENST00000524126 AATFQ9NY61 560 aaKnown RBP eCLIP11.16□□□□□ -0.62
SPIDR-224ENST00000524126 DLGAP2Q9P1A6 1054 aa11.16□□□□□ -0.62
SPIDR-224ENST00000524126 SWAP70Q9UH65 585 aa11.16□□□□□ -0.62
SPIDR-224ENST00000524126 PDS5AQ29RF7 1337 aaKnown RBP11.16□□□□□ -0.62
SPIDR-224ENST00000524126 ZBTB43O43298 467 aa11.16□□□□□ -0.62
SPIDR-224ENST00000524126 VIMP08670 466 aaKnown RBP11.16□□□□□ -0.62
SPIDR-224ENST00000524126 CNGA1P29973 690 aa11.16□□□□□ -0.62
SPIDR-224ENST00000524126 KIF11P52732 1056 aa11.16□□□□□ -0.62
SPIDR-224ENST00000524126 KCNQ4P56696 695 aa11.16□□□□□ -0.62
SPIDR-224ENST00000524126 RASSF7Q02833 373 aa11.16□□□□□ -0.62
SPIDR-224ENST00000524126 RNASELQ05823 741 aaKnown RBP11.16□□□□□ -0.62
SPIDR-224ENST00000524126 ITIH4Q14624 930 aa11.16□□□□□ -0.62
SPIDR-224ENST00000524126 C2CD5Q86YS7 1000 aa11.16□□□□□ -0.62
SPIDR-224ENST00000524126 TBC1D10CQ8IV04 446 aa11.16□□□□□ -0.62
SPIDR-224ENST00000524126 MYD88Q99836 296 aa11.16□□□□□ -0.62
SPIDR-224ENST00000524126 SUDS3Q9H7L9 328 aaPredicted RBP11.16□□□□□ -0.62
SPIDR-224ENST00000524126 SAMD15Q9P1V8 674 aa11.16□□□□□ -0.62
SPIDR-224ENST00000524126 MYH7BA7E2Y1 1941 aa11.16□□□□□ -0.62
SPIDR-224ENST00000524126 DISP2A7MBM2 1401 aa11.16□□□□□ -0.62
SPIDR-224ENST00000524126 MYH1P12882 1939 aa11.15□□□□□ -0.62
SPIDR-224ENST00000524126 B4E1Z4 1266 aa11.15□□□□□ -0.62
SPIDR-224ENST00000524126 ZNF213O14771 459 aa11.15□□□□□ -0.62
SPIDR-224ENST00000524126 SART1O43290 800 aaKnown RBP11.15□□□□□ -0.62
SPIDR-224ENST00000524126 IFNAR2P48551 515 aa11.15□□□□□ -0.62
SPIDR-224ENST00000524126 MYBPC3Q14896 1274 aa11.15□□□□□ -0.62
SPIDR-224ENST00000524126 NKX1-1Q15270 411 aaPredicted RBP11.15□□□□□ -0.62
SPIDR-224ENST00000524126 FAM98CQ17RN3 349 aaKnown RBP11.15□□□□□ -0.62
SPIDR-224ENST00000524126 EARS2Q5JPH6 523 aaKnown RBP11.15□□□□□ -0.62
SPIDR-224ENST00000524126 DNAJC14Q6Y2X3 702 aaPredicted RBP11.15□□□□□ -0.62
SPIDR-224ENST00000524126 RIC3Q7Z5B4 369 aa11.15□□□□□ -0.62
SPIDR-224ENST00000524126 UCMAQ8WVF2 138 aa11.15□□□□□ -0.62
SPIDR-224ENST00000524126 TMOD3Q9NYL9 352 aa11.15□□□□□ -0.62
SPIDR-224ENST00000524126 ANKIB1Q9P2G1 1089 aa11.15□□□□□ -0.62
SPIDR-224ENST00000524126 ITGB4P16144 1822 aa11.15□□□□□ -0.62
SPIDR-224ENST00000524126 ATP6V1G1O75348 118 aa11.15□□□□□ -0.62
SPIDR-224ENST00000524126 IFIT1P09914 478 aaKnown RBP11.15□□□□□ -0.62
SPIDR-224ENST00000524126 SRGNP10124 158 aa11.15□□□□□ -0.62
SPIDR-224ENST00000524126 STAT6P42226 847 aa11.15□□□□□ -0.62
SPIDR-224ENST00000524126 CCNG1P51959 295 aa11.15□□□□□ -0.62
SPIDR-224ENST00000524126 MRPS35P82673 323 aaKnown RBP11.15□□□□□ -0.62
SPIDR-224ENST00000524126 ATP11AP98196 1134 aa11.15□□□□□ -0.62
SPIDR-224ENST00000524126 FKBP4Q02790 459 aaKnown RBP eCLIP11.15□□□□□ -0.62
SPIDR-224ENST00000524126 CCDC57Q2TAC2 916 aa11.15□□□□□ -0.62
SPIDR-224ENST00000524126 SPATA31A1Q5TZJ5 1347 aa11.15□□□□□ -0.62
SPIDR-224ENST00000524126 KCPQ6ZWJ8 1503 aa11.15□□□□□ -0.62
SPIDR-224ENST00000524126 DNAJC10Q8IXB1 793 aa11.15□□□□□ -0.62
SPIDR-224ENST00000524126 ATXN2LQ8WWM7 1075 aaKnown RBP11.15□□□□□ -0.62
SPIDR-224ENST00000524126 KIFAP3Q92845 792 aa11.15□□□□□ -0.62
SPIDR-224ENST00000524126 PRMT1Q99873 361 aaKnown RBP11.15□□□□□ -0.62
SPIDR-224ENST00000524126 PUS7LQ9H0K6 701 aaKnown RBP11.15□□□□□ -0.62
SPIDR-224ENST00000524126 ISCUQ9H1K1 167 aa11.15□□□□□ -0.62
SPIDR-224ENST00000524126 ZBTB3Q9H5J0 574 aa11.15□□□□□ -0.62
SPIDR-224ENST00000524126 EXOC1Q9NV70 894 aa11.15□□□□□ -0.62
SPIDR-224ENST00000524126 TSKSQ9UJT2 592 aa11.15□□□□□ -0.62
SPIDR-224ENST00000524126 SMIM23A6NLE4 172 aa11.14□□□□□ -0.63
SPIDR-224ENST00000524126 EPHB6O15197 1021 aa11.14□□□□□ -0.63
SPIDR-224ENST00000524126 ASAP2O43150 1006 aa11.14□□□□□ -0.63
SPIDR-224ENST00000524126 KCNQ2O43526 872 aa11.14□□□□□ -0.63
SPIDR-224ENST00000524126 RAD23BP54727 409 aa11.14□□□□□ -0.63
SPIDR-224ENST00000524126 LACTBP83111 547 aaPredicted RBP11.14□□□□□ -0.63
SPIDR-224ENST00000524126 PTPROQ16827 1216 aa11.14□□□□□ -0.63
SPIDR-224ENST00000524126 LMNTD2Q8IXW0 634 aa11.14□□□□□ -0.63
SPIDR-224ENST00000524126 MAIP1Q8WWC4 291 aa11.14□□□□□ -0.63
SPIDR-224ENST00000524126 TRIM47Q96LD4 638 aa11.14□□□□□ -0.63
SPIDR-224ENST00000524126 MMTAG2Q9BU76 263 aaKnown RBP11.14□□□□□ -0.63
SPIDR-224ENST00000524126 ABCF2Q9UG63 623 aa11.14□□□□□ -0.63
SPIDR-224ENST00000524126 NEURL1BA8MQ27 555 aa11.14□□□□□ -0.63
SPIDR-224ENST00000524126 AKR1B10O60218 316 aa11.14□□□□□ -0.63
SPIDR-224ENST00000524126 SETSIPP0DME0 302 aa11.14□□□□□ -0.63
SPIDR-224ENST00000524126 GNAZP19086 355 aa11.14□□□□□ -0.63
SPIDR-224ENST00000524126 MAGEA1P43355 309 aa11.14□□□□□ -0.63
SPIDR-224ENST00000524126 GFPT1Q06210 699 aaPredicted RBP11.14□□□□□ -0.63
SPIDR-224ENST00000524126 SMIM5Q71RC9 77 aa11.14□□□□□ -0.63
SPIDR-224ENST00000524126 MARCH10Q8NA82 808 aaPredicted RBP11.14□□□□□ -0.63
SPIDR-224ENST00000524126 RBM17Q96I25 401 aaKnown RBP11.14□□□□□ -0.63
SPIDR-224ENST00000524126 NGLY1Q96IV0 654 aa11.14□□□□□ -0.63
SPIDR-224ENST00000524126 DDX60Q8IY21 1712 aaKnown RBP11.13□□□□□ -0.63
SPIDR-224ENST00000524126 ERVV-2B6SEH9 535 aa11.13□□□□□ -0.63
SPIDR-224ENST00000524126 H7C1D1 291 aa11.13□□□□□ -0.63
SPIDR-224ENST00000524126 PALMO75781 387 aa11.13□□□□□ -0.63
SPIDR-224ENST00000524126 MYBP10242 640 aa11.13□□□□□ -0.63
SPIDR-224ENST00000524126 SLC1A4P43007 532 aa11.13□□□□□ -0.63
SPIDR-224ENST00000524126 DNM2P50570 870 aa11.13□□□□□ -0.63
SPIDR-224ENST00000524126 COPS2P61201 443 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms