RNA–Protein interactions for RNA: ENST00000523190.5

PVT1-217, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 443 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-217ENST00000523190 TMEM119Q4V9L6 283 aa7.55□□□□□ -1.2
PVT1-217ENST00000523190 L1TD1Q5T7N2 865 aaKnown RBP7.55□□□□□ -1.2
PVT1-217ENST00000523190 POTEBQ6S5H4 581 aa7.55□□□□□ -1.2
PVT1-217ENST00000523190 NIPA1Q7RTP0 329 aa7.55□□□□□ -1.2
PVT1-217ENST00000523190 KCNK18Q7Z418 384 aa7.55□□□□□ -1.2
PVT1-217ENST00000523190 NSUN6Q8TEA1 469 aaKnown RBP7.55□□□□□ -1.2
PVT1-217ENST00000523190 SMARCE1Q969G3 411 aa7.55□□□□□ -1.2
PVT1-217ENST00000523190 CCDC34Q96HJ3 373 aa7.55□□□□□ -1.2
PVT1-217ENST00000523190 MMP19Q99542 508 aa7.55□□□□□ -1.2
PVT1-217ENST00000523190 MTRQ99707 1265 aa7.55□□□□□ -1.2
PVT1-217ENST00000523190 TEKT3Q9BXF9 490 aa7.55□□□□□ -1.2
PVT1-217ENST00000523190 BLZF1Q9H2G9 400 aa7.55□□□□□ -1.2
PVT1-217ENST00000523190 AGO4Q9HCK5 861 aaKnown RBP7.55□□□□□ -1.2
PVT1-217ENST00000523190 JADE2Q9NQC1 790 aa7.55□□□□□ -1.2
PVT1-217ENST00000523190 KCNH7Q9NS40 1196 aa7.55□□□□□ -1.2
PVT1-217ENST00000523190 MAN1B1Q9UKM7 699 aa7.55□□□□□ -1.2
PVT1-217ENST00000523190 ABT1Q9ULW3 272 aaKnown RBP7.55□□□□□ -1.2
PVT1-217ENST00000523190 POTEFA5A3E0 1075 aa7.54□□□□□ -1.2
PVT1-217ENST00000523190 IPO5O00410 1097 aaKnown RBP7.54□□□□□ -1.2
PVT1-217ENST00000523190 IGF2BP3O00425 579 aaKnown RBP eCLIP7.54□□□□□ -1.2
PVT1-217ENST00000523190 PGK2P07205 417 aa7.54□□□□□ -1.2
PVT1-217ENST00000523190 BCRP11274 1271 aa7.54□□□□□ -1.2
PVT1-217ENST00000523190 GCLCP48506 637 aaPredicted RBP7.54□□□□□ -1.2
PVT1-217ENST00000523190 SARSP49591 514 aaKnown RBP7.54□□□□□ -1.2
PVT1-217ENST00000523190 CYP4A11Q02928 519 aa7.54□□□□□ -1.2
PVT1-217ENST00000523190 FSTL1Q12841 308 aa7.54□□□□□ -1.2
PVT1-217ENST00000523190 DPYDQ12882 1025 aa7.54□□□□□ -1.2
PVT1-217ENST00000523190 SEMA3FQ13275 785 aa7.54□□□□□ -1.2
PVT1-217ENST00000523190 ITGB3BPQ13352 177 aaPredicted RBP7.54□□□□□ -1.2
PVT1-217ENST00000523190 PPP2R5CQ13362 524 aa7.54□□□□□ -1.2
PVT1-217ENST00000523190 CUL4BQ13620 913 aa7.54□□□□□ -1.2
PVT1-217ENST00000523190 DHX8Q14562 1220 aaKnown RBP7.54□□□□□ -1.2
PVT1-217ENST00000523190 MCM6Q14566 821 aa7.54□□□□□ -1.2
PVT1-217ENST00000523190 KCTD2Q14681 263 aa7.54□□□□□ -1.2
PVT1-217ENST00000523190 ECM1Q16610 540 aa7.54□□□□□ -1.2
PVT1-217ENST00000523190 DPCR1Q3MIW9 517 aa7.54□□□□□ -1.2
PVT1-217ENST00000523190 HYIQ5T013 277 aa7.54□□□□□ -1.2
PVT1-217ENST00000523190 HAUS3Q68CZ6 603 aa7.54□□□□□ -1.2
PVT1-217ENST00000523190 XRRA1Q6P2D8 792 aa7.54□□□□□ -1.2
PVT1-217ENST00000523190 POTEGQ6S5H5 508 aa7.54□□□□□ -1.2
PVT1-217ENST00000523190 NLRX1Q86UT6 975 aa7.54□□□□□ -1.2
PVT1-217ENST00000523190 VSIG10LQ86VR7 867 aa7.54□□□□□ -1.2
PVT1-217ENST00000523190 FAM133AQ8N9E0 248 aa7.54□□□□□ -1.2
PVT1-217ENST00000523190 SHCBP1Q8NEM2 672 aa7.54□□□□□ -1.2
PVT1-217ENST00000523190 GPRC5AQ8NFJ5 357 aa7.54□□□□□ -1.2
PVT1-217ENST00000523190 DNERQ8NFT8 737 aa7.54□□□□□ -1.2
PVT1-217ENST00000523190 ERMNQ8TAM6 284 aa7.54□□□□□ -1.2
PVT1-217ENST00000523190 GPRASP2Q96D09 838 aa7.54□□□□□ -1.2
PVT1-217ENST00000523190 FGD4Q96M96 766 aa7.54□□□□□ -1.2
PVT1-217ENST00000523190 INPP4AQ96PE3 977 aaPredicted RBP7.54□□□□□ -1.2
PVT1-217ENST00000523190 UNC45AQ9H3U1 944 aa7.54□□□□□ -1.2
PVT1-217ENST00000523190 CUEDC2Q9H467 287 aa7.54□□□□□ -1.2
PVT1-217ENST00000523190 MROH8Q9H579 483 aa7.54□□□□□ -1.2
PVT1-217ENST00000523190 MAGEF1Q9HAY2 307 aa7.54□□□□□ -1.2
PVT1-217ENST00000523190 CBX8Q9HC52 389 aa7.54□□□□□ -1.2
PVT1-217ENST00000523190 BLOC1S4Q9NUP1 217 aa7.54□□□□□ -1.2
PVT1-217ENST00000523190 ANO10Q9NW15 660 aa7.54□□□□□ -1.2
PVT1-217ENST00000523190 MORF4L1Q9UBU8 362 aa7.54□□□□□ -1.2
PVT1-217ENST00000523190 STK17AQ9UEE5 414 aa7.54□□□□□ -1.2
PVT1-217ENST00000523190 LRRC37A2A6NM11 1700 aa7.54□□□□□ -1.2
PVT1-217ENST00000523190 ADGRA2Q96PE1 1338 aa7.53□□□□□ -1.2
PVT1-217ENST00000523190 DNAJC25-GNG10A0A024R161 153 aa7.53□□□□□ -1.2
PVT1-217ENST00000523190 TMEM88BA6NKF7 163 aa7.53□□□□□ -1.2
PVT1-217ENST00000523190 FAM155AB1AL88 458 aaPredicted RBP7.53□□□□□ -1.2
PVT1-217ENST00000523190 E9PMD0 336 aa7.53□□□□□ -1.2
PVT1-217ENST00000523190 SLC26A4O43511 780 aa7.53□□□□□ -1.2
PVT1-217ENST00000523190 ATP9AO75110 1047 aa7.53□□□□□ -1.2
PVT1-217ENST00000523190 RGS20O76081 388 aa7.53□□□□□ -1.2
PVT1-217ENST00000523190 TOMM70O94826 608 aa7.53□□□□□ -1.2
PVT1-217ENST00000523190 SMC2O95347 1197 aa7.53□□□□□ -1.2
PVT1-217ENST00000523190 FCER1AP12319 257 aa7.53□□□□□ -1.2
PVT1-217ENST00000523190 XRCC6P12956 609 aaKnown RBP eCLIP7.53□□□□□ -1.2
PVT1-217ENST00000523190 ZNF165P49910 485 aa7.53□□□□□ -1.2
PVT1-217ENST00000523190 CCNA1P78396 465 aa7.53□□□□□ -1.2
PVT1-217ENST00000523190 GRM1Q13255 1194 aa7.53□□□□□ -1.2
PVT1-217ENST00000523190 CTTNQ14247 550 aaKnown RBP7.53□□□□□ -1.2
PVT1-217ENST00000523190 TAF1CQ15572 869 aaPredicted RBP7.53□□□□□ -1.2
PVT1-217ENST00000523190 STXBP2Q15833 593 aa7.53□□□□□ -1.2
PVT1-217ENST00000523190 FAM110CQ1W6H9 321 aa7.53□□□□□ -1.2
PVT1-217ENST00000523190 NT5DC1Q5TFE4 455 aa7.53□□□□□ -1.2
PVT1-217ENST00000523190 B3GNT9Q6UX72 402 aa7.53□□□□□ -1.2
PVT1-217ENST00000523190 SV2BQ7L1I2 683 aa7.53□□□□□ -1.2
PVT1-217ENST00000523190 OTOP1Q7RTM1 612 aa7.53□□□□□ -1.2
PVT1-217ENST00000523190 MIER3Q7Z3K6 550 aa7.53□□□□□ -1.2
PVT1-217ENST00000523190 IFNL1Q8IU54 200 aa7.53□□□□□ -1.2
PVT1-217ENST00000523190 FAM200AQ8TCP9 573 aa7.53□□□□□ -1.2
PVT1-217ENST00000523190 LARP4BQ92615 738 aaKnown RBP7.53□□□□□ -1.2
PVT1-217ENST00000523190 RAD54LQ92698 747 aa7.53□□□□□ -1.2
PVT1-217ENST00000523190 DYDC2Q96IM9 177 aa7.53□□□□□ -1.2
PVT1-217ENST00000523190 IWS1Q96ST2 819 aa7.53□□□□□ -1.2
PVT1-217ENST00000523190 RIT2Q99578 217 aa7.53□□□□□ -1.2
PVT1-217ENST00000523190 EIF2AK1Q9BQI3 630 aaKnown RBP7.53□□□□□ -1.2
PVT1-217ENST00000523190 MFRPQ9BY79 579 aa7.53□□□□□ -1.2
PVT1-217ENST00000523190 NT5C3AQ9H0P0 336 aa7.53□□□□□ -1.2
PVT1-217ENST00000523190 KBTBD4Q9NVX7 518 aa7.53□□□□□ -1.2
PVT1-217ENST00000523190 RGL1Q9NZL6 768 aa7.53□□□□□ -1.2
PVT1-217ENST00000523190 ADD3Q9UEY8 706 aaKnown RBP7.53□□□□□ -1.2
PVT1-217ENST00000523190 CPA4Q9UI42 421 aa7.53□□□□□ -1.2
PVT1-217ENST00000523190 KIAA1024Q9UPX6 916 aa7.53□□□□□ -1.2
PVT1-217ENST00000523190 PLXNB2O15031 1838 aa7.52□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms