RNA–Protein interactions for RNA: ENST00000523013.1

CLK4-213, Transcript of CDC like kinase 4, humanhuman

TSL 2

Gene CLK4, Length 735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-213ENST00000523013 YTHDC1Q96MU7 727 aaKnown RBP6.27□□□□□ -1.41
CLK4-213ENST00000523013 SSBP3Q9BWW4 388 aaPredicted RBP6.27□□□□□ -1.41
CLK4-213ENST00000523013 SLC27A2O14975 620 aa6.26□□□□□ -1.41
CLK4-213ENST00000523013 B4GALT3O60512 393 aa6.26□□□□□ -1.41
CLK4-213ENST00000523013 MAFKO60675 156 aa6.26□□□□□ -1.41
CLK4-213ENST00000523013 ZNF827Q17R98 1081 aa6.26□□□□□ -1.41
CLK4-213ENST00000523013 YOD1Q5VVQ6 348 aaPredicted RBP6.26□□□□□ -1.41
CLK4-213ENST00000523013 BORAQ6PGQ7 559 aa6.26□□□□□ -1.41
CLK4-213ENST00000523013 TMC5Q6UXY8 1006 aa6.26□□□□□ -1.41
CLK4-213ENST00000523013 OTOP3Q7RTS5 596 aa6.26□□□□□ -1.41
CLK4-213ENST00000523013 FAM124AQ86V42 546 aa6.26□□□□□ -1.41
CLK4-213ENST00000523013 LCORQ96JN0 433 aaPredicted RBP6.26□□□□□ -1.41
CLK4-213ENST00000523013 CLIC6Q96NY7 704 aa6.26□□□□□ -1.41
CLK4-213ENST00000523013 TMEM209Q96SK2 561 aa6.26□□□□□ -1.41
CLK4-213ENST00000523013 KRTAP3-1Q9BYR8 98 aa6.26□□□□□ -1.41
CLK4-213ENST00000523013 BLACEA4D250 179 aa6.25□□□□□ -1.41
CLK4-213ENST00000523013 GRK2P25098 689 aa6.25□□□□□ -1.41
CLK4-213ENST00000523013 GRK3P35626 688 aa6.25□□□□□ -1.41
CLK4-213ENST00000523013 HABP4Q5JVS0 413 aaKnown RBP6.25□□□□□ -1.41
CLK4-213ENST00000523013 STYK1Q6J9G0 422 aa6.25□□□□□ -1.41
CLK4-213ENST00000523013 NSMFQ6X4W1 530 aa6.25□□□□□ -1.41
CLK4-213ENST00000523013 TRIM48Q8IWZ4 208 aa6.25□□□□□ -1.41
CLK4-213ENST00000523013 RBM12BQ8IXT5 1001 aaKnown RBP6.25□□□□□ -1.41
CLK4-213ENST00000523013 ZFYVE21Q9BQ24 234 aa6.25□□□□□ -1.41
CLK4-213ENST00000523013 PDGFDQ9GZP0 370 aaPredicted RBP6.25□□□□□ -1.41
CLK4-213ENST00000523013 SMPD4Q9NXE4 827 aa6.25□□□□□ -1.41
CLK4-213ENST00000523013 CROTQ9UKG9 612 aa6.25□□□□□ -1.41
CLK4-213ENST00000523013 MSRB2Q9Y3D2 182 aa6.25□□□□□ -1.41
CLK4-213ENST00000523013 COL6A1P12109 1028 aa6.24□□□□□ -1.41
CLK4-213ENST00000523013 ADAM17P78536 824 aa6.24□□□□□ -1.41
CLK4-213ENST00000523013 GRIN1Q05586 938 aa6.24□□□□□ -1.41
CLK4-213ENST00000523013 KIZQ2M2Z5 673 aa6.24□□□□□ -1.41
CLK4-213ENST00000523013 ZXDCQ2QGD7 858 aaPredicted RBP6.24□□□□□ -1.41
CLK4-213ENST00000523013 LRRC47Q8N1G4 583 aaKnown RBP6.24□□□□□ -1.41
CLK4-213ENST00000523013 UHMK1Q8TAS1 419 aaKnown RBP6.24□□□□□ -1.41
CLK4-213ENST00000523013 SAMD11Q96NU1 681 aa6.24□□□□□ -1.41
CLK4-213ENST00000523013 L2HGDHQ9H9P8 463 aa6.24□□□□□ -1.41
CLK4-213ENST00000523013 TELO2Q9Y4R8 837 aa6.24□□□□□ -1.41
CLK4-213ENST00000523013 ASXL2Q76L83 1435 aa6.24□□□□□ -1.41
CLK4-213ENST00000523013 TRAV20A0A0B4J274 112 aa6.23□□□□□ -1.41
CLK4-213ENST00000523013 NKRFO15226 690 aaKnown RBP eCLIP6.23□□□□□ -1.41
CLK4-213ENST00000523013 LTFP02788 710 aa6.23□□□□□ -1.41
CLK4-213ENST00000523013 CYP1A1P04798 512 aaPredicted RBP6.23□□□□□ -1.41
CLK4-213ENST00000523013 COL6A2P12110 1019 aa6.23□□□□□ -1.41
CLK4-213ENST00000523013 INSRRP14616 1297 aa6.23□□□□□ -1.41
CLK4-213ENST00000523013 GPR85P60893 370 aa6.23□□□□□ -1.41
CLK4-213ENST00000523013 TUSC3Q13454 348 aa6.23□□□□□ -1.41
CLK4-213ENST00000523013 PKN3Q6P5Z2 889 aa6.23□□□□□ -1.41
CLK4-213ENST00000523013 TTC9BQ8N6N2 239 aa6.23□□□□□ -1.41
CLK4-213ENST00000523013 DTX3Q8N9I9 347 aa6.23□□□□□ -1.41
CLK4-213ENST00000523013 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.23□□□□□ -1.41
CLK4-213ENST00000523013 ZNF669Q96BR6 464 aaPredicted RBP6.23□□□□□ -1.41
CLK4-213ENST00000523013 BORCS6Q96GS4 357 aa6.23□□□□□ -1.41
CLK4-213ENST00000523013 WRNIP1Q96S55 665 aa6.23□□□□□ -1.41
CLK4-213ENST00000523013 TMEM168Q9H0V1 697 aa6.23□□□□□ -1.41
CLK4-213ENST00000523013 CYP7B1O75881 506 aa6.22□□□□□ -1.41
CLK4-213ENST00000523013 SOD2P04179 222 aa6.22□□□□□ -1.41
CLK4-213ENST00000523013 IFRD2Q12894 506 aaPredicted RBP6.22□□□□□ -1.41
CLK4-213ENST00000523013 PAN2Q504Q3 1202 aaKnown RBP6.22□□□□□ -1.41
CLK4-213ENST00000523013 PHF19Q5T6S3 580 aa6.22□□□□□ -1.41
CLK4-213ENST00000523013 SPATC1Q76KD6 591 aa6.22□□□□□ -1.41
CLK4-213ENST00000523013 LIMS2Q7Z4I7 341 aa6.22□□□□□ -1.41
CLK4-213ENST00000523013 IFNL3Q8IZI9 196 aa6.22□□□□□ -1.41
CLK4-213ENST00000523013 LOXL4Q96JB6 756 aa6.22□□□□□ -1.41
CLK4-213ENST00000523013 GPR20Q99678 358 aa6.22□□□□□ -1.41
CLK4-213ENST00000523013 KCNJ15Q99712 375 aa6.22□□□□□ -1.41
CLK4-213ENST00000523013 SPATA9Q9BWV2 254 aa6.22□□□□□ -1.41
CLK4-213ENST00000523013 TRIM55Q9BYV6 548 aa6.22□□□□□ -1.41
CLK4-213ENST00000523013 DLL4Q9NR61 685 aa6.22□□□□□ -1.41
CLK4-213ENST00000523013 PPP4R1LQ9P1A2 415 aa6.22□□□□□ -1.41
CLK4-213ENST00000523013 MYRFQ9Y2G1 1151 aa6.22□□□□□ -1.41
CLK4-213ENST00000523013 LAMTOR5O43504 91 aa6.21□□□□□ -1.42
CLK4-213ENST00000523013 ADCY3O60266 1144 aa6.21□□□□□ -1.42
CLK4-213ENST00000523013 GNAT1P11488 350 aa6.21□□□□□ -1.42
CLK4-213ENST00000523013 FAHP16930 419 aa6.21□□□□□ -1.42
CLK4-213ENST00000523013 SPIRE1Q08AE8 756 aa6.21□□□□□ -1.42
CLK4-213ENST00000523013 VASNQ6EMK4 673 aa6.21□□□□□ -1.42
CLK4-213ENST00000523013 TRMT10BQ6PF06 316 aaKnown RBP6.21□□□□□ -1.42
CLK4-213ENST00000523013 C8orf49Q96NF6 230 aa6.21□□□□□ -1.42
CLK4-213ENST00000523013 C1QTNF3Q9BXJ4 246 aa6.21□□□□□ -1.42
CLK4-213ENST00000523013 IPPKQ9H8X2 491 aa6.21□□□□□ -1.42
CLK4-213ENST00000523013 FTSJ1Q9UET6 329 aa6.21□□□□□ -1.42
CLK4-213ENST00000523013 ZNF536O15090 1300 aa6.21□□□□□ -1.42
CLK4-213ENST00000523013 STK10O94804 968 aaKnown RBP6.2□□□□□ -1.42
CLK4-213ENST00000523013 KLHL18O94889 574 aa6.2□□□□□ -1.42
CLK4-213ENST00000523013 ZNF20P17024 532 aa6.2□□□□□ -1.42
CLK4-213ENST00000523013 EPHA5P54756 1037 aa6.2□□□□□ -1.42
CLK4-213ENST00000523013 ZC3H6P61129 1189 aaKnown RBP6.2□□□□□ -1.42
CLK4-213ENST00000523013 PUM1Q14671 1186 aaKnown RBP eCLIP6.2□□□□□ -1.42
CLK4-213ENST00000523013 SURF1Q15526 300 aa6.2□□□□□ -1.42
CLK4-213ENST00000523013 CPZQ66K79 652 aa6.2□□□□□ -1.42
CLK4-213ENST00000523013 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.2□□□□□ -1.42
CLK4-213ENST00000523013 PLEKHH3Q7Z736 793 aa6.2□□□□□ -1.42
CLK4-213ENST00000523013 KLHL36Q8N4N3 616 aa6.2□□□□□ -1.42
CLK4-213ENST00000523013 NUDT10Q8NFP7 164 aa6.2□□□□□ -1.42
CLK4-213ENST00000523013 IGDCC4Q8TDY8 1250 aa6.2□□□□□ -1.42
CLK4-213ENST00000523013 NUDT11Q96G61 164 aa6.2□□□□□ -1.42
CLK4-213ENST00000523013 DSEQ9UL01 958 aa6.2□□□□□ -1.42
CLK4-213ENST00000523013 TRAF6Q9Y4K3 522 aa6.2□□□□□ -1.42
CLK4-213ENST00000523013 FAM47E-STBD1D6RA91 191 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms