RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 GRM8O00222 908 aa7.92□□□□□ -1.14
VPS13B-211ENST00000522802 ZKSCAN1P17029 563 aaPredicted RBP7.92□□□□□ -1.14
VPS13B-211ENST00000522802 RGS3P49796 1198 aa7.92□□□□□ -1.14
VPS13B-211ENST00000522802 IKBKEQ14164 716 aa7.92□□□□□ -1.14
VPS13B-211ENST00000522802 RALBP1Q15311 655 aa7.92□□□□□ -1.14
VPS13B-211ENST00000522802 CAVIN4Q5BKX8 364 aa7.92□□□□□ -1.14
VPS13B-211ENST00000522802 FAM117BQ6P1L5 589 aa7.92□□□□□ -1.14
VPS13B-211ENST00000522802 Q8N3U1 123 aa7.92□□□□□ -1.14
VPS13B-211ENST00000522802 KLHL23Q8NBE8 558 aa7.92□□□□□ -1.14
VPS13B-211ENST00000522802 KAZALD1Q96I82 304 aa7.92□□□□□ -1.14
VPS13B-211ENST00000522802 SENP6Q9GZR1 1112 aaPredicted RBP7.92□□□□□ -1.14
VPS13B-211ENST00000522802 OSGEPQ9NPF4 335 aa7.92□□□□□ -1.14
VPS13B-211ENST00000522802 FAM8A1Q9UBU6 413 aa7.92□□□□□ -1.14
VPS13B-211ENST00000522802 SUGT1Q9Y2Z0 365 aa7.92□□□□□ -1.14
VPS13B-211ENST00000522802 MROH5Q6ZUA9 1318 aa7.92□□□□□ -1.14
VPS13B-211ENST00000522802 DDTLA6NHG4 134 aaPredicted RBP7.91□□□□□ -1.14
VPS13B-211ENST00000522802 GSTT1P30711 240 aa7.91□□□□□ -1.14
VPS13B-211ENST00000522802 GCLCP48506 637 aaPredicted RBP7.91□□□□□ -1.14
VPS13B-211ENST00000522802 HMGCS2P54868 508 aa7.91□□□□□ -1.14
VPS13B-211ENST00000522802 RTP1P59025 263 aa7.91□□□□□ -1.14
VPS13B-211ENST00000522802 SMAD3P84022 425 aaKnown RBP7.91□□□□□ -1.14
VPS13B-211ENST00000522802 PCDH1Q08174 1060 aa7.91□□□□□ -1.14
VPS13B-211ENST00000522802 MAP3K12Q12852 859 aa7.91□□□□□ -1.14
VPS13B-211ENST00000522802 PSMD2Q13200 908 aa7.91□□□□□ -1.14
VPS13B-211ENST00000522802 METTL24Q5JXM2 366 aa7.91□□□□□ -1.14
VPS13B-211ENST00000522802 HGSNATQ68CP4 663 aa7.91□□□□□ -1.14
VPS13B-211ENST00000522802 DTHD1Q6ZMT9 781 aa7.91□□□□□ -1.14
VPS13B-211ENST00000522802 SOCS4Q8WXH5 440 aa7.91□□□□□ -1.14
VPS13B-211ENST00000522802 SUCLG2Q96I99 432 aa7.91□□□□□ -1.14
VPS13B-211ENST00000522802 CHMP4AQ9BY43 222 aa7.91□□□□□ -1.14
VPS13B-211ENST00000522802 ASCC2Q9H1I8 757 aaPredicted RBP7.91□□□□□ -1.14
VPS13B-211ENST00000522802 SOX17Q9H6I2 414 aaPredicted RBP7.91□□□□□ -1.14
VPS13B-211ENST00000522802 TXNRD2Q9NNW7 524 aa7.91□□□□□ -1.14
VPS13B-211ENST00000522802 DDX4Q9NQI0 724 aaKnown RBP7.91□□□□□ -1.14
VPS13B-211ENST00000522802 USP40Q9NVE5 1235 aa7.91□□□□□ -1.14
VPS13B-211ENST00000522802 MORF4L1Q9UBU8 362 aa7.91□□□□□ -1.14
VPS13B-211ENST00000522802 B3GALT4O96024 378 aa7.9□□□□□ -1.14
VPS13B-211ENST00000522802 FURINP09958 794 aa7.9□□□□□ -1.14
VPS13B-211ENST00000522802 EIF4BP23588 611 aaKnown RBP7.9□□□□□ -1.14
VPS13B-211ENST00000522802 C19orf57Q0VDD7 668 aa7.9□□□□□ -1.14
VPS13B-211ENST00000522802 SPP2Q13103 211 aa7.9□□□□□ -1.14
VPS13B-211ENST00000522802 GRIK4Q16099 956 aa7.9□□□□□ -1.14
VPS13B-211ENST00000522802 IGF2-ASQ6U949 168 aa7.9□□□□□ -1.14
VPS13B-211ENST00000522802 KLHDC4Q8TBB5 520 aa7.9□□□□□ -1.14
VPS13B-211ENST00000522802 KLHDC7BQ96G42 594 aa7.9□□□□□ -1.14
VPS13B-211ENST00000522802 PRDM5Q9NQX1 630 aaPredicted RBP7.9□□□□□ -1.14
VPS13B-211ENST00000522802 ATP11BQ9Y2G3 1177 aa7.9□□□□□ -1.14
VPS13B-211ENST00000522802 LRRFIP2Q9Y608 721 aaKnown RBP7.9□□□□□ -1.14
VPS13B-211ENST00000522802 PIEZO1Q92508 2521 aa7.9□□□□□ -1.15
VPS13B-211ENST00000522802 KIF16BQ96L93 1317 aa7.89□□□□□ -1.15
VPS13B-211ENST00000522802 CTNND1O60716 968 aaKnown RBP7.89□□□□□ -1.15
VPS13B-211ENST00000522802 PDE8BO95263 885 aa7.89□□□□□ -1.15
VPS13B-211ENST00000522802 USP17L7P0C7H9 530 aa7.89□□□□□ -1.15
VPS13B-211ENST00000522802 FGFR2P21802 821 aa7.89□□□□□ -1.15
VPS13B-211ENST00000522802 FAAP100Q0VG06 881 aa7.89□□□□□ -1.15
VPS13B-211ENST00000522802 PICALMQ13492 652 aa7.89□□□□□ -1.15
VPS13B-211ENST00000522802 RRP1BQ14684 758 aaKnown RBP7.89□□□□□ -1.15
VPS13B-211ENST00000522802 PUM3Q15397 648 aaKnown RBP7.89□□□□□ -1.15
VPS13B-211ENST00000522802 ANKRD44Q8N8A2 993 aa7.89□□□□□ -1.15
VPS13B-211ENST00000522802 FOXD4L4Q8WXT5 416 aaPredicted RBP7.89□□□□□ -1.15
VPS13B-211ENST00000522802 USP6NLQ92738 828 aa7.89□□□□□ -1.15
VPS13B-211ENST00000522802 BADQ92934 168 aa7.89□□□□□ -1.15
VPS13B-211ENST00000522802 APBA2Q99767 749 aa7.89□□□□□ -1.15
VPS13B-211ENST00000522802 IDI2Q9BXS1 227 aa7.89□□□□□ -1.15
VPS13B-211ENST00000522802 PORCNQ9H237 461 aa7.89□□□□□ -1.15
VPS13B-211ENST00000522802 BICC1Q9H694 974 aaKnown RBP7.89□□□□□ -1.15
VPS13B-211ENST00000522802 FLRT1Q9NZU1 646 aa7.89□□□□□ -1.15
VPS13B-211ENST00000522802 PRKAG2Q9UGJ0 569 aa7.89□□□□□ -1.15
VPS13B-211ENST00000522802 TRANK1O15050 2925 aa7.89□□□□□ -1.15
VPS13B-211ENST00000522802 CDK5RAP2Q96SN8 1893 aa7.88□□□□□ -1.15
VPS13B-211ENST00000522802 GAKO14976 1311 aa7.88□□□□□ -1.15
VPS13B-211ENST00000522802 FANCIQ9NVI1 1328 aa7.88□□□□□ -1.15
VPS13B-211ENST00000522802 SORBS3O60504 671 aa7.88□□□□□ -1.15
VPS13B-211ENST00000522802 ENTPD3O75355 529 aa7.88□□□□□ -1.15
VPS13B-211ENST00000522802 NBPF7P0C2Y1 421 aaPredicted RBP7.88□□□□□ -1.15
VPS13B-211ENST00000522802 SELPP16109 830 aa7.88□□□□□ -1.15
VPS13B-211ENST00000522802 CD68P34810 354 aaPredicted RBP7.88□□□□□ -1.15
VPS13B-211ENST00000522802 ZEB1P37275 1124 aaPredicted RBP7.88□□□□□ -1.15
VPS13B-211ENST00000522802 ARL4DP49703 201 aa7.88□□□□□ -1.15
VPS13B-211ENST00000522802 EPHB4P54760 987 aa7.88□□□□□ -1.15
VPS13B-211ENST00000522802 TRIM60Q495X7 471 aa7.88□□□□□ -1.15
VPS13B-211ENST00000522802 WDR66Q8TBY9 1149 aa7.88□□□□□ -1.15
VPS13B-211ENST00000522802 SLC7A3Q8WY07 619 aa7.88□□□□□ -1.15
VPS13B-211ENST00000522802 PPM1EQ8WY54 764 aa7.88□□□□□ -1.15
VPS13B-211ENST00000522802 LENG1Q96BZ8 264 aaPredicted RBP7.88□□□□□ -1.15
VPS13B-211ENST00000522802 RNPC3Q96LT9 517 aaKnown RBP7.88□□□□□ -1.15
VPS13B-211ENST00000522802 NECAB3Q96P71 396 aaPredicted RBP7.88□□□□□ -1.15
VPS13B-211ENST00000522802 PDLIM7Q9NR12 457 aa7.88□□□□□ -1.15
VPS13B-211ENST00000522802 KCNK4Q9NYG8 393 aa7.88□□□□□ -1.15
VPS13B-211ENST00000522802 PPM1HQ9ULR3 514 aa7.88□□□□□ -1.15
VPS13B-211ENST00000522802 AKAP2Q9Y2D5 859 aa7.88□□□□□ -1.15
VPS13B-211ENST00000522802 TCF20Q9UGU0 1960 aaKnown RBP7.88□□□□□ -1.15
VPS13B-211ENST00000522802 GBF1Q92538 1859 aa7.87□□□□□ -1.15
VPS13B-211ENST00000522802 PLXNA1Q9UIW2 1896 aa7.87□□□□□ -1.15
VPS13B-211ENST00000522802 ZNF236Q9UL36 1845 aa7.87□□□□□ -1.15
VPS13B-211ENST00000522802 TRIM43BA6NCK2 446 aa7.87□□□□□ -1.15
VPS13B-211ENST00000522802 DNM1LO00429 736 aa7.87□□□□□ -1.15
VPS13B-211ENST00000522802 CTSHP09668 335 aa7.87□□□□□ -1.15
VPS13B-211ENST00000522802 IFIT1P09914 478 aaKnown RBP7.87□□□□□ -1.15
VPS13B-211ENST00000522802 ITGB8P26012 769 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms