RNA–Protein interactions for RNA: ENST00000521683.5

CTNNA1-229, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-229ENST00000521683 XRRA1Q6P2D8 792 aa10.28□□□□□ -0.76
CTNNA1-229ENST00000521683 METTL7BQ6UX53 244 aa10.28□□□□□ -0.76
CTNNA1-229ENST00000521683 FCHSD1Q86WN1 690 aa10.28□□□□□ -0.76
CTNNA1-229ENST00000521683 IGDCC4Q8TDY8 1250 aa10.28□□□□□ -0.76
CTNNA1-229ENST00000521683 GPKOWQ92917 476 aaPredicted RBP eCLIP10.28□□□□□ -0.76
CTNNA1-229ENST00000521683 MAP4K1Q92918 833 aa10.28□□□□□ -0.76
CTNNA1-229ENST00000521683 TGS1Q96RS0 853 aaKnown RBP10.28□□□□□ -0.76
CTNNA1-229ENST00000521683 USP26Q9BXU7 913 aa10.28□□□□□ -0.76
CTNNA1-229ENST00000521683 TUT1Q9H6E5 874 aaKnown RBP10.28□□□□□ -0.76
CTNNA1-229ENST00000521683 TAF6LQ9Y6J9 622 aa10.28□□□□□ -0.76
CTNNA1-229ENST00000521683 MICAL3Q7RTP6 2002 aa10.28□□□□□ -0.76
CTNNA1-229ENST00000521683 LINC01553A4QN01 128 aa10.27□□□□□ -0.77
CTNNA1-229ENST00000521683 RSPH10B2B2RC85 870 aa10.27□□□□□ -0.77
CTNNA1-229ENST00000521683 SPATA31C2B4DYI2 1134 aa10.27□□□□□ -0.77
CTNNA1-229ENST00000521683 PIK3CDO00329 1044 aa10.27□□□□□ -0.77
CTNNA1-229ENST00000521683 NOP56O00567 594 aaKnown RBP10.27□□□□□ -0.77
CTNNA1-229ENST00000521683 FIBPO43427 364 aa10.27□□□□□ -0.77
CTNNA1-229ENST00000521683 RSPH10BP0C881 870 aa10.27□□□□□ -0.77
CTNNA1-229ENST00000521683 SMIM10L2AP0DMW4 78 aa10.27□□□□□ -0.77
CTNNA1-229ENST00000521683 SMIM10L2BP0DMW5 78 aa10.27□□□□□ -0.77
CTNNA1-229ENST00000521683 KIF5BP33176 963 aa10.27□□□□□ -0.77
CTNNA1-229ENST00000521683 ERVK-21P61565 698 aa10.27□□□□□ -0.77
CTNNA1-229ENST00000521683 MRPS9P82933 396 aaKnown RBP10.27□□□□□ -0.77
CTNNA1-229ENST00000521683 TFF2Q03403 129 aa10.27□□□□□ -0.77
CTNNA1-229ENST00000521683 SEMA3FQ13275 785 aa10.27□□□□□ -0.77
CTNNA1-229ENST00000521683 KRT40Q6A162 431 aa10.27□□□□□ -0.77
CTNNA1-229ENST00000521683 SPRED2Q7Z698 418 aa10.27□□□□□ -0.77
CTNNA1-229ENST00000521683 CTCFLQ8NI51 663 aaPredicted RBP10.27□□□□□ -0.77
CTNNA1-229ENST00000521683 GDPD5Q8WTR4 605 aa10.27□□□□□ -0.77
CTNNA1-229ENST00000521683 ATP6V0A1Q93050 837 aa10.27□□□□□ -0.77
CTNNA1-229ENST00000521683 SENP7Q9BQF6 1050 aa10.27□□□□□ -0.77
CTNNA1-229ENST00000521683 LZTS2Q9BRK4 669 aa10.27□□□□□ -0.77
CTNNA1-229ENST00000521683 LY9Q9HBG7 655 aa10.27□□□□□ -0.77
CTNNA1-229ENST00000521683 COL4A6Q14031 1691 aa10.27□□□□□ -0.77
CTNNA1-229ENST00000521683 SIP14410 1827 aa10.26□□□□□ -0.77
CTNNA1-229ENST00000521683 SORBS3O60504 671 aa10.26□□□□□ -0.77
CTNNA1-229ENST00000521683 AMHP03971 560 aa10.26□□□□□ -0.77
CTNNA1-229ENST00000521683 ATXN8OSP0DMR3 200 aa10.26□□□□□ -0.77
CTNNA1-229ENST00000521683 GNAT1P11488 350 aa10.26□□□□□ -0.77
CTNNA1-229ENST00000521683 THPOP40225 353 aa10.26□□□□□ -0.77
CTNNA1-229ENST00000521683 GNAQP50148 359 aa10.26□□□□□ -0.77
CTNNA1-229ENST00000521683 KCNQ1P51787 676 aa10.26□□□□□ -0.77
CTNNA1-229ENST00000521683 HTRA4P83105 476 aaPredicted RBP10.26□□□□□ -0.77
CTNNA1-229ENST00000521683 PLEKHG4Q58EX7 1191 aa10.26□□□□□ -0.77
CTNNA1-229ENST00000521683 PCNX4Q63HM2 1172 aa10.26□□□□□ -0.77
CTNNA1-229ENST00000521683 CASC1Q6TDU7 716 aa10.26□□□□□ -0.77
CTNNA1-229ENST00000521683 TMCO2Q7Z6W1 182 aaPredicted RBP10.26□□□□□ -0.77
CTNNA1-229ENST00000521683 ZNF654Q8IZM8 581 aa10.26□□□□□ -0.77
CTNNA1-229ENST00000521683 DBF4BQ8NFT6 615 aa10.26□□□□□ -0.77
CTNNA1-229ENST00000521683 SP7Q8TDD2 431 aaPredicted RBP10.26□□□□□ -0.77
CTNNA1-229ENST00000521683 CUL5Q93034 780 aa10.26□□□□□ -0.77
CTNNA1-229ENST00000521683 HLA-CQ95604 372 aa10.26□□□□□ -0.77
CTNNA1-229ENST00000521683 RRP36Q96EU6 259 aaKnown RBP10.26□□□□□ -0.77
CTNNA1-229ENST00000521683 ZFP91Q96JP5 570 aaPredicted RBP10.26□□□□□ -0.77
CTNNA1-229ENST00000521683 GPR20Q99678 358 aa10.26□□□□□ -0.77
CTNNA1-229ENST00000521683 RNPEPQ9H4A4 650 aa10.26□□□□□ -0.77
CTNNA1-229ENST00000521683 SEC63Q9UGP8 760 aaKnown RBP10.26□□□□□ -0.77
CTNNA1-229ENST00000521683 ZNF215Q9UL58 517 aaPredicted RBP10.26□□□□□ -0.77
CTNNA1-229ENST00000521683 INSL6Q9Y581 213 aa10.26□□□□□ -0.77
CTNNA1-229ENST00000521683 RBM8AQ9Y5S9 174 aaKnown RBP10.26□□□□□ -0.77
CTNNA1-229ENST00000521683 TCF20Q9UGU0 1960 aaKnown RBP10.25□□□□□ -0.77
CTNNA1-229ENST00000521683 MEIS2O14770 477 aa10.25□□□□□ -0.77
CTNNA1-229ENST00000521683 TREHO43280 583 aa10.25□□□□□ -0.77
CTNNA1-229ENST00000521683 COL9A1P20849 921 aa10.25□□□□□ -0.77
CTNNA1-229ENST00000521683 ADAM17P78536 824 aa10.25□□□□□ -0.77
CTNNA1-229ENST00000521683 CYFIP1Q7L576 1253 aa10.25□□□□□ -0.77
CTNNA1-229ENST00000521683 NLRX1Q86UT6 975 aa10.25□□□□□ -0.77
CTNNA1-229ENST00000521683 TMTC2Q8N394 836 aa10.25□□□□□ -0.77
CTNNA1-229ENST00000521683 GIMAP8Q8ND71 665 aaPredicted RBP10.25□□□□□ -0.77
CTNNA1-229ENST00000521683 SMARCC2Q8TAQ2 1214 aa10.25□□□□□ -0.77
CTNNA1-229ENST00000521683 SEPT8Q92599 483 aa10.25□□□□□ -0.77
CTNNA1-229ENST00000521683 GPRASP2Q96D09 838 aa10.25□□□□□ -0.77
CTNNA1-229ENST00000521683 CDHR1Q96JP9 859 aa10.25□□□□□ -0.77
CTNNA1-229ENST00000521683 TMEM87BQ96K49 555 aa10.25□□□□□ -0.77
CTNNA1-229ENST00000521683 SAMD11Q96NU1 681 aa10.25□□□□□ -0.77
CTNNA1-229ENST00000521683 BCAS3Q9H6U6 928 aa10.25□□□□□ -0.77
CTNNA1-229ENST00000521683 SUGCTQ9HAC7 445 aa10.25□□□□□ -0.77
CTNNA1-229ENST00000521683 SUPT16HQ9Y5B9 1047 aaKnown RBP10.25□□□□□ -0.77
CTNNA1-229ENST00000521683 SH2B2O14492 632 aaPredicted RBP10.24□□□□□ -0.77
CTNNA1-229ENST00000521683 PRC1O43663 620 aa10.24□□□□□ -0.77
CTNNA1-229ENST00000521683 CALM1P0DP23 149 aa10.24□□□□□ -0.77
CTNNA1-229ENST00000521683 CALM2P0DP24 149 aa10.24□□□□□ -0.77
CTNNA1-229ENST00000521683 CALM3P0DP25 149 aa10.24□□□□□ -0.77
CTNNA1-229ENST00000521683 MCM5P33992 734 aa10.24□□□□□ -0.77
CTNNA1-229ENST00000521683 LIFRP42702 1097 aa10.24□□□□□ -0.77
CTNNA1-229ENST00000521683 FAM26DQ5JW98 314 aa10.24□□□□□ -0.77
CTNNA1-229ENST00000521683 FAM117BQ6P1L5 589 aa10.24□□□□□ -0.77
CTNNA1-229ENST00000521683 USP17L6PQ6QN14 398 aa10.24□□□□□ -0.77
CTNNA1-229ENST00000521683 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.24□□□□□ -0.77
CTNNA1-229ENST00000521683 RPAINQ86UA6 219 aa10.24□□□□□ -0.77
CTNNA1-229ENST00000521683 TRIM50Q86XT4 487 aa10.24□□□□□ -0.77
CTNNA1-229ENST00000521683 MYOCDQ8IZQ8 938 aa10.24□□□□□ -0.77
CTNNA1-229ENST00000521683 FBXO22Q8NEZ5 403 aa10.24□□□□□ -0.77
CTNNA1-229ENST00000521683 PIBF1Q8WXW3 757 aa10.24□□□□□ -0.77
CTNNA1-229ENST00000521683 APBB2Q92870 758 aa10.24□□□□□ -0.77
CTNNA1-229ENST00000521683 NECAB3Q96P71 396 aaPredicted RBP10.24□□□□□ -0.77
CTNNA1-229ENST00000521683 MYL10Q9BUA6 226 aa10.24□□□□□ -0.77
CTNNA1-229ENST00000521683 C1QTNF1Q9BXJ1 281 aa10.24□□□□□ -0.77
CTNNA1-229ENST00000521683 SETD4Q9NVD3 440 aa10.24□□□□□ -0.77
CTNNA1-229ENST00000521683 RTEL1Q9NZ71 1219 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms