RNA–Protein interactions for RNA: ENST00000521590.5

SDC2-206, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-206ENST00000521590 USP9XQ93008 2570 aaPredicted RBP6.17□□□□□ -1.42
SDC2-206ENST00000521590 FLT1P17948 1338 aa6.17□□□□□ -1.42
SDC2-206ENST00000521590 PDS5AQ29RF7 1337 aaKnown RBP6.17□□□□□ -1.42
SDC2-206ENST00000521590 F6X3S4 739 aa6.16□□□□□ -1.42
SDC2-206ENST00000521590 SLC30A4O14863 429 aa6.16□□□□□ -1.42
SDC2-206ENST00000521590 ZEB2O60315 1214 aa6.16□□□□□ -1.42
SDC2-206ENST00000521590 EFCAB14O75071 495 aa6.16□□□□□ -1.42
SDC2-206ENST00000521590 FLOT1O75955 427 aa6.16□□□□□ -1.42
SDC2-206ENST00000521590 NBPF7P0C2Y1 421 aaPredicted RBP6.16□□□□□ -1.42
SDC2-206ENST00000521590 DNAJB1P25685 340 aa6.16□□□□□ -1.42
SDC2-206ENST00000521590 MCAMP43121 646 aa6.16□□□□□ -1.42
SDC2-206ENST00000521590 GNAI1P63096 354 aa6.16□□□□□ -1.42
SDC2-206ENST00000521590 RBM10P98175 930 aaKnown RBP6.16□□□□□ -1.42
SDC2-206ENST00000521590 ABCB5Q2M3G0 1257 aa6.16□□□□□ -1.42
SDC2-206ENST00000521590 N4BP2L1Q5TBK1 243 aaPredicted RBP6.16□□□□□ -1.42
SDC2-206ENST00000521590 SPTY2D1Q68D10 685 aaPredicted RBP6.16□□□□□ -1.42
SDC2-206ENST00000521590 ERICH6Q7L0X2 663 aa6.16□□□□□ -1.42
SDC2-206ENST00000521590 ATG9AQ7Z3C6 839 aa6.16□□□□□ -1.42
SDC2-206ENST00000521590 SIAH1Q8IUQ4 282 aa6.16□□□□□ -1.42
SDC2-206ENST00000521590 MAPKAPK5Q8IW41 473 aa6.16□□□□□ -1.42
SDC2-206ENST00000521590 ANKRD44Q8N8A2 993 aa6.16□□□□□ -1.42
SDC2-206ENST00000521590 RIN2Q8WYP3 895 aaPredicted RBP6.16□□□□□ -1.42
SDC2-206ENST00000521590 DHX38Q92620 1227 aaKnown RBP6.16□□□□□ -1.42
SDC2-206ENST00000521590 DDX11Q96FC9 970 aa6.16□□□□□ -1.42
SDC2-206ENST00000521590 RTP3Q9BQQ7 232 aa6.16□□□□□ -1.42
SDC2-206ENST00000521590 AP5M1Q9H0R1 490 aa6.16□□□□□ -1.42
SDC2-206ENST00000521590 S1PR5Q9H228 398 aa6.16□□□□□ -1.42
SDC2-206ENST00000521590 BICC1Q9H694 974 aaKnown RBP6.16□□□□□ -1.42
SDC2-206ENST00000521590 Q9Y3F1 56 aa6.16□□□□□ -1.42
SDC2-206ENST00000521590 KALRNO60229 2985 aa6.15□□□□□ -1.42
SDC2-206ENST00000521590 TICRRQ7Z2Z1 1910 aa6.15□□□□□ -1.42
SDC2-206ENST00000521590 CNOT1A5YKK6 2376 aaKnown RBP6.15□□□□□ -1.42
SDC2-206ENST00000521590 VWA5AO00534 786 aa6.15□□□□□ -1.42
SDC2-206ENST00000521590 MMP1P03956 469 aa6.15□□□□□ -1.42
SDC2-206ENST00000521590 RB1P06400 928 aa6.15□□□□□ -1.42
SDC2-206ENST00000521590 LDHCP07864 332 aa6.15□□□□□ -1.42
SDC2-206ENST00000521590 SELPP16109 830 aa6.15□□□□□ -1.42
SDC2-206ENST00000521590 SP100P23497 879 aaPredicted RBP6.15□□□□□ -1.42
SDC2-206ENST00000521590 BMPR1AP36894 532 aa6.15□□□□□ -1.42
SDC2-206ENST00000521590 RBL2Q08999 1139 aa6.15□□□□□ -1.42
SDC2-206ENST00000521590 MBTPS1Q14703 1052 aa6.15□□□□□ -1.42
SDC2-206ENST00000521590 SEPT2Q15019 361 aa6.15□□□□□ -1.42
SDC2-206ENST00000521590 CERKLQ49MI3 558 aaPredicted RBP6.15□□□□□ -1.42
SDC2-206ENST00000521590 CCDC102BQ68D86 513 aa6.15□□□□□ -1.42
SDC2-206ENST00000521590 TAPT1Q6NXT6 567 aa6.15□□□□□ -1.42
SDC2-206ENST00000521590 NFRKBQ6P4R8 1299 aa6.15□□□□□ -1.42
SDC2-206ENST00000521590 ZC3H14Q6PJT7 736 aaKnown RBP6.15□□□□□ -1.42
SDC2-206ENST00000521590 UNQ6494/PRO21346Q6UXR6 183 aa6.15□□□□□ -1.42
SDC2-206ENST00000521590 NOL8Q76FK4 1167 aaKnown RBP6.15□□□□□ -1.42
SDC2-206ENST00000521590 LRRC8DQ7L1W4 858 aa6.15□□□□□ -1.42
SDC2-206ENST00000521590 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.15□□□□□ -1.42
SDC2-206ENST00000521590 VN1R2Q8NFZ6 395 aa6.15□□□□□ -1.42
SDC2-206ENST00000521590 ATP8B4Q8TF62 1192 aa6.15□□□□□ -1.42
SDC2-206ENST00000521590 TOP1MTQ969P6 601 aa6.15□□□□□ -1.42
SDC2-206ENST00000521590 TRIM34Q9BYJ4 488 aa6.15□□□□□ -1.42
SDC2-206ENST00000521590 ZFAND3Q9H8U3 227 aa6.15□□□□□ -1.42
SDC2-206ENST00000521590 PARD6AQ9NPB6 346 aa6.15□□□□□ -1.42
SDC2-206ENST00000521590 PDGFCQ9NRA1 345 aa6.15□□□□□ -1.42
SDC2-206ENST00000521590 FBXO28Q9NVF7 368 aa6.15□□□□□ -1.42
SDC2-206ENST00000521590 C9orf78Q9NZ63 289 aaPredicted RBP6.15□□□□□ -1.42
SDC2-206ENST00000521590 NCDNQ9UBB6 729 aa6.15□□□□□ -1.42
SDC2-206ENST00000521590 SAP30BPQ9UHR5 308 aaKnown RBP6.15□□□□□ -1.42
SDC2-206ENST00000521590 DENND4AQ7Z401 1863 aa6.15□□□□□ -1.43
SDC2-206ENST00000521590 MIA3Q5JRA6 1907 aa6.15□□□□□ -1.43
SDC2-206ENST00000521590 EYA2O00167 538 aa6.14□□□□□ -1.43
SDC2-206ENST00000521590 PARNO95453 639 aaKnown RBP6.14□□□□□ -1.43
SDC2-206ENST00000521590 ASGR2P07307 311 aa6.14□□□□□ -1.43
SDC2-206ENST00000521590 NR3C2P08235 984 aa6.14□□□□□ -1.43
SDC2-206ENST00000521590 CKBP12277 381 aa6.14□□□□□ -1.43
SDC2-206ENST00000521590 ADORA1P30542 326 aa6.14□□□□□ -1.43
SDC2-206ENST00000521590 SHMT1P34896 483 aa6.14□□□□□ -1.43
SDC2-206ENST00000521590 CTNNB1P35222 781 aa6.14□□□□□ -1.43
SDC2-206ENST00000521590 RFX5P48382 616 aaPredicted RBP6.14□□□□□ -1.43
SDC2-206ENST00000521590 NRIP1P48552 1158 aa6.14□□□□□ -1.43
SDC2-206ENST00000521590 PTPN11Q06124 597 aaPredicted RBP6.14□□□□□ -1.43
SDC2-206ENST00000521590 KCNMA1Q12791 1236 aa6.14□□□□□ -1.43
SDC2-206ENST00000521590 TRIM26Q12899 539 aaPredicted RBP6.14□□□□□ -1.43
SDC2-206ENST00000521590 ATP2B3Q16720 1220 aa6.14□□□□□ -1.43
SDC2-206ENST00000521590 FAM47CQ5HY64 1035 aa6.14□□□□□ -1.43
SDC2-206ENST00000521590 IQSEC1Q6DN90 963 aa6.14□□□□□ -1.43
SDC2-206ENST00000521590 TBC1D9Q6ZT07 1266 aa6.14□□□□□ -1.43
SDC2-206ENST00000521590 MAML2Q8IZL2 1156 aaPredicted RBP6.14□□□□□ -1.43
SDC2-206ENST00000521590 MYOCDQ8IZQ8 938 aa6.14□□□□□ -1.43
SDC2-206ENST00000521590 KCTD17Q8N5Z5 321 aa6.14□□□□□ -1.43
SDC2-206ENST00000521590 FAM133AQ8N9E0 248 aa6.14□□□□□ -1.43
SDC2-206ENST00000521590 CAGE1Q8TC20 777 aa6.14□□□□□ -1.43
SDC2-206ENST00000521590 FOXJ1Q92949 421 aa6.14□□□□□ -1.43
SDC2-206ENST00000521590 ITPKCQ96DU7 683 aa6.14□□□□□ -1.43
SDC2-206ENST00000521590 HNRNPABQ99729 332 aaKnown RBP6.14□□□□□ -1.43
SDC2-206ENST00000521590 C11orf84Q9BUA3 381 aaPredicted RBP6.14□□□□□ -1.43
SDC2-206ENST00000521590 POLR3EQ9NVU0 708 aa6.14□□□□□ -1.43
SDC2-206ENST00000521590 AATFQ9NY61 560 aaKnown RBP eCLIP6.14□□□□□ -1.43
SDC2-206ENST00000521590 DDX49Q9Y6V7 483 aaKnown RBP6.14□□□□□ -1.43
SDC2-206ENST00000521590 C2CD4DB7Z1M9 353 aa6.13□□□□□ -1.43
SDC2-206ENST00000521590 KINO60870 393 aaKnown RBP6.13□□□□□ -1.43
SDC2-206ENST00000521590 PPFIA3O75145 1194 aa6.13□□□□□ -1.43
SDC2-206ENST00000521590 CSPG5O95196 566 aa6.13□□□□□ -1.43
SDC2-206ENST00000521590 AMHP03971 560 aa6.13□□□□□ -1.43
SDC2-206ENST00000521590 COPB2P35606 906 aa6.13□□□□□ -1.43
SDC2-206ENST00000521590 GSTO1P78417 241 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms