RNA–Protein interactions for RNA: ENST00000521439.1

NUDCD1-204, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 1,172 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-204ENST00000521439 TCRBV5S4A2TA0A5A2 114 aa9.15□□□□□ -0.94
NUDCD1-204ENST00000521439 ZNF891A8MT65 544 aaPredicted RBP9.15□□□□□ -0.94
NUDCD1-204ENST00000521439 GAS7O60861 476 aa9.15□□□□□ -0.94
NUDCD1-204ENST00000521439 AMY2AP04746 511 aa9.15□□□□□ -0.94
NUDCD1-204ENST00000521439 DBHP09172 617 aa9.15□□□□□ -0.94
NUDCD1-204ENST00000521439 KRT15P19012 456 aa9.15□□□□□ -0.94
NUDCD1-204ENST00000521439 AMY2BP19961 511 aa9.15□□□□□ -0.94
NUDCD1-204ENST00000521439 DSG1Q02413 1049 aa9.15□□□□□ -0.94
NUDCD1-204ENST00000521439 EMC4Q5J8M3 183 aa9.15□□□□□ -0.94
NUDCD1-204ENST00000521439 STEAP3Q658P3 488 aa9.15□□□□□ -0.94
NUDCD1-204ENST00000521439 OTOP1Q7RTM1 612 aa9.15□□□□□ -0.94
NUDCD1-204ENST00000521439 DCP2Q8IU60 420 aaKnown RBP9.15□□□□□ -0.94
NUDCD1-204ENST00000521439 PRPF38AQ8NAV1 312 aaKnown RBP9.15□□□□□ -0.94
NUDCD1-204ENST00000521439 USP7Q93009 1102 aa9.15□□□□□ -0.94
NUDCD1-204ENST00000521439 SMURF1Q9HCE7 757 aa9.15□□□□□ -0.94
NUDCD1-204ENST00000521439 KRTAP9-6A0A140TA67 174 aa9.14□□□□□ -0.95
NUDCD1-204ENST00000521439 PTPDC1A2A3K4 754 aa9.14□□□□□ -0.95
NUDCD1-204ENST00000521439 HGSO14964 777 aaPredicted RBP9.14□□□□□ -0.95
NUDCD1-204ENST00000521439 BRINP1O60477 761 aa9.14□□□□□ -0.95
NUDCD1-204ENST00000521439 MAFKO60675 156 aa9.14□□□□□ -0.95
NUDCD1-204ENST00000521439 CYBBP04839 570 aa9.14□□□□□ -0.95
NUDCD1-204ENST00000521439 BPIP17213 487 aa9.14□□□□□ -0.95
NUDCD1-204ENST00000521439 CDKN1CP49918 316 aaPredicted RBP9.14□□□□□ -0.95
NUDCD1-204ENST00000521439 ERVFRD-1P60508 538 aa9.14□□□□□ -0.95
NUDCD1-204ENST00000521439 CYP4F22Q6NT55 531 aa9.14□□□□□ -0.95
NUDCD1-204ENST00000521439 PAQR3Q6TCH7 311 aa9.14□□□□□ -0.95
NUDCD1-204ENST00000521439 HHIPL2Q6UWX4 724 aa9.14□□□□□ -0.95
NUDCD1-204ENST00000521439 PRR23BQ6ZRT6 265 aa9.14□□□□□ -0.95
NUDCD1-204ENST00000521439 UHMK1Q8TAS1 419 aaKnown RBP9.14□□□□□ -0.95
NUDCD1-204ENST00000521439 SEC14L1Q92503 715 aa9.14□□□□□ -0.95
NUDCD1-204ENST00000521439 TTC1Q99614 292 aa9.14□□□□□ -0.95
NUDCD1-204ENST00000521439 AP5M1Q9H0R1 490 aa9.14□□□□□ -0.95
NUDCD1-204ENST00000521439 IFT22Q9H7X7 185 aa9.14□□□□□ -0.95
NUDCD1-204ENST00000521439 DSEQ9UL01 958 aa9.14□□□□□ -0.95
NUDCD1-204ENST00000521439 ZEB2O60315 1214 aa9.13□□□□□ -0.95
NUDCD1-204ENST00000521439 TADA3O75528 432 aa9.13□□□□□ -0.95
NUDCD1-204ENST00000521439 PTRH1Q86Y79 214 aaKnown RBP9.13□□□□□ -0.95
NUDCD1-204ENST00000521439 SMC1BQ8NDV3 1235 aa9.13□□□□□ -0.95
NUDCD1-204ENST00000521439 SH3RF2Q8TEC5 729 aa9.13□□□□□ -0.95
NUDCD1-204ENST00000521439 FAM84AQ96KN4 292 aa9.13□□□□□ -0.95
NUDCD1-204ENST00000521439 SLC38A3Q99624 504 aa9.13□□□□□ -0.95
NUDCD1-204ENST00000521439 SLC6A17Q9H1V8 727 aa9.13□□□□□ -0.95
NUDCD1-204ENST00000521439 SMOC1Q9H4F8 434 aa9.13□□□□□ -0.95
NUDCD1-204ENST00000521439 NUDT5Q9UKK9 219 aa9.13□□□□□ -0.95
NUDCD1-204ENST00000521439 NUB1Q9Y5A7 615 aa9.13□□□□□ -0.95
NUDCD1-204ENST00000521439 SLC12A8A0AV02 714 aa9.12□□□□□ -0.95
NUDCD1-204ENST00000521439 MAN2B1O00754 1011 aa9.12□□□□□ -0.95
NUDCD1-204ENST00000521439 SGSM2O43147 1006 aa9.12□□□□□ -0.95
NUDCD1-204ENST00000521439 MPOP05164 745 aa9.12□□□□□ -0.95
NUDCD1-204ENST00000521439 C8AP07357 584 aa9.12□□□□□ -0.95
NUDCD1-204ENST00000521439 YBX3P16989 372 aaKnown RBP eCLIP9.12□□□□□ -0.95
NUDCD1-204ENST00000521439 MESP2Q0VG99 397 aa9.12□□□□□ -0.95
NUDCD1-204ENST00000521439 ZNF648Q5T619 568 aaPredicted RBP9.12□□□□□ -0.95
NUDCD1-204ENST00000521439 EP400NLQ6ZTU2 488 aa9.12□□□□□ -0.95
NUDCD1-204ENST00000521439 NLGN4XQ8N0W4 816 aa9.12□□□□□ -0.95
NUDCD1-204ENST00000521439 WDR66Q8TBY9 1149 aa9.12□□□□□ -0.95
NUDCD1-204ENST00000521439 PEX11GQ96HA9 241 aa9.12□□□□□ -0.95
NUDCD1-204ENST00000521439 INTS4Q96HW7 963 aaKnown RBP9.12□□□□□ -0.95
NUDCD1-204ENST00000521439 BOCQ9BWV1 1114 aa9.12□□□□□ -0.95
NUDCD1-204ENST00000521439 NSUN3Q9H649 340 aaKnown RBP9.12□□□□□ -0.95
NUDCD1-204ENST00000521439 ZNF652Q9Y2D9 606 aa9.12□□□□□ -0.95
NUDCD1-204ENST00000521439 SIT1Q9Y3P8 196 aa9.12□□□□□ -0.95
NUDCD1-204ENST00000521439 ZC3H12DA2A288 527 aaKnown RBP9.11□□□□□ -0.95
NUDCD1-204ENST00000521439 F8W031 263 aaPredicted RBP9.11□□□□□ -0.95
NUDCD1-204ENST00000521439 NEMP1O14524 444 aa9.11□□□□□ -0.95
NUDCD1-204ENST00000521439 ATP2A2P16615 1042 aaKnown RBP9.11□□□□□ -0.95
NUDCD1-204ENST00000521439 IL2P60568 153 aa9.11□□□□□ -0.95
NUDCD1-204ENST00000521439 STAT4Q14765 748 aa9.11□□□□□ -0.95
NUDCD1-204ENST00000521439 NR1I3Q14994 352 aa9.11□□□□□ -0.95
NUDCD1-204ENST00000521439 FIGNQ5HY92 759 aa9.11□□□□□ -0.95
NUDCD1-204ENST00000521439 IRF2BP1Q8IU81 584 aa9.11□□□□□ -0.95
NUDCD1-204ENST00000521439 PHOSPHO1Q8TCT1 267 aa9.11□□□□□ -0.95
NUDCD1-204ENST00000521439 DIRC2Q96SL1 478 aa9.11□□□□□ -0.95
NUDCD1-204ENST00000521439 EPB41L4BQ9H329 900 aa9.11□□□□□ -0.95
NUDCD1-204ENST00000521439 RXFP1Q9HBX9 757 aa9.11□□□□□ -0.95
NUDCD1-204ENST00000521439 THG1LQ9NWX6 298 aaKnown RBP9.11□□□□□ -0.95
NUDCD1-204ENST00000521439 SRPK3Q9UPE1 567 aa9.11□□□□□ -0.95
NUDCD1-204ENST00000521439 KCNK3O14649 394 aa9.1□□□□□ -0.95
NUDCD1-204ENST00000521439 SLC27A2O14975 620 aa9.1□□□□□ -0.95
NUDCD1-204ENST00000521439 FKBP9O95302 570 aa9.1□□□□□ -0.95
NUDCD1-204ENST00000521439 ZBTB48P10074 688 aaPredicted RBP9.1□□□□□ -0.95
NUDCD1-204ENST00000521439 SDHBP21912 280 aa9.1□□□□□ -0.95
NUDCD1-204ENST00000521439 PMLP29590 882 aa9.1□□□□□ -0.95
NUDCD1-204ENST00000521439 ADCYAP1R1P41586 468 aa9.1□□□□□ -0.95
NUDCD1-204ENST00000521439 EVA1CP58658 441 aa9.1□□□□□ -0.95
NUDCD1-204ENST00000521439 ADGRF1Q5T601 910 aa9.1□□□□□ -0.95
NUDCD1-204ENST00000521439 RNF219Q5W0B1 726 aaPredicted RBP9.1□□□□□ -0.95
NUDCD1-204ENST00000521439 FKBP9P1Q75LS8 142 aa9.1□□□□□ -0.95
NUDCD1-204ENST00000521439 KRTAP19-1Q8IUB9 90 aa9.1□□□□□ -0.95
NUDCD1-204ENST00000521439 BHLHE22Q8NFJ8 381 aaPredicted RBP9.1□□□□□ -0.95
NUDCD1-204ENST00000521439 CHTF18Q8WVB6 975 aa9.1□□□□□ -0.95
NUDCD1-204ENST00000521439 GPR101Q96P66 508 aaPredicted RBP9.1□□□□□ -0.95
NUDCD1-204ENST00000521439 CD244Q9BZW8 370 aa9.1□□□□□ -0.95
NUDCD1-204ENST00000521439 HOMER2Q9NSB8 354 aa9.1□□□□□ -0.95
NUDCD1-204ENST00000521439 DDX56Q9NY93 547 aaKnown RBP9.1□□□□□ -0.95
NUDCD1-204ENST00000521439 MYOTQ9UBF9 498 aa9.1□□□□□ -0.95
NUDCD1-204ENST00000521439 DBR1Q9UK59 544 aaKnown RBP9.1□□□□□ -0.95
NUDCD1-204ENST00000521439 PALD1Q9ULE6 856 aa9.1□□□□□ -0.95
NUDCD1-204ENST00000521439 PHLDB1Q86UU1 1377 aa9.1□□□□□ -0.95
NUDCD1-204ENST00000521439 NISCHQ9Y2I1 1504 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms