RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 RNF187Q5TA31 235 aaPredicted RBP7.32□□□□□ -1.24
SKP1-208ENST00000521216 FILIP1Q7Z7B0 1213 aa7.32□□□□□ -1.24
SKP1-208ENST00000521216 LDHDQ86WU2 507 aa7.32□□□□□ -1.24
SKP1-208ENST00000521216 TRIM48Q8IWZ4 208 aa7.32□□□□□ -1.24
SKP1-208ENST00000521216 AHI1Q8N157 1196 aa7.32□□□□□ -1.24
SKP1-208ENST00000521216 PPM1KQ8N3J5 372 aa7.32□□□□□ -1.24
SKP1-208ENST00000521216 UBR7Q8N806 425 aa7.32□□□□□ -1.24
SKP1-208ENST00000521216 UHMK1Q8TAS1 419 aaKnown RBP7.32□□□□□ -1.24
SKP1-208ENST00000521216 PHOSPHO1Q8TCT1 267 aa7.32□□□□□ -1.24
SKP1-208ENST00000521216 LEO1Q8WVC0 666 aaPredicted RBP7.32□□□□□ -1.24
SKP1-208ENST00000521216 DDX11Q96FC9 970 aa7.32□□□□□ -1.24
SKP1-208ENST00000521216 CNTD2Q9H8S5 307 aa7.32□□□□□ -1.24
SKP1-208ENST00000521216 ASH2LQ9UBL3 628 aa7.32□□□□□ -1.24
SKP1-208ENST00000521216 MBD1Q9UIS9 605 aaPredicted RBP7.32□□□□□ -1.24
SKP1-208ENST00000521216 A0A087X0B3 334 aa7.31□□□□□ -1.24
SKP1-208ENST00000521216 TEX51A0A1B0GUA7 166 aa7.31□□□□□ -1.24
SKP1-208ENST00000521216 ASGR2P07307 311 aa7.31□□□□□ -1.24
SKP1-208ENST00000521216 CNGA1P29973 690 aa7.31□□□□□ -1.24
SKP1-208ENST00000521216 STAT5AP42229 794 aa7.31□□□□□ -1.24
SKP1-208ENST00000521216 LACTBP83111 547 aaPredicted RBP7.31□□□□□ -1.24
SKP1-208ENST00000521216 CT47A1Q5JQC4 288 aaPredicted RBP7.31□□□□□ -1.24
SKP1-208ENST00000521216 CYP4F22Q6NT55 531 aa7.31□□□□□ -1.24
SKP1-208ENST00000521216 ETV3LQ6ZN32 361 aa7.31□□□□□ -1.24
SKP1-208ENST00000521216 SYDE1Q6ZW31 735 aaPredicted RBP7.31□□□□□ -1.24
SKP1-208ENST00000521216 KCTD1Q719H9 257 aa7.31□□□□□ -1.24
SKP1-208ENST00000521216 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.31□□□□□ -1.24
SKP1-208ENST00000521216 NLGN4XQ8N0W4 816 aa7.31□□□□□ -1.24
SKP1-208ENST00000521216 SH3RF2Q8TEC5 729 aa7.31□□□□□ -1.24
SKP1-208ENST00000521216 CLEC4DQ8WXI8 215 aa7.31□□□□□ -1.24
SKP1-208ENST00000521216 SMURF1Q9HCE7 757 aa7.31□□□□□ -1.24
SKP1-208ENST00000521216 SRPK3Q9UPE1 567 aa7.31□□□□□ -1.24
SKP1-208ENST00000521216 SLC12A8A0AV02 714 aa7.3□□□□□ -1.24
SKP1-208ENST00000521216 GSG1L2A8MUP6 293 aa7.3□□□□□ -1.24
SKP1-208ENST00000521216 ZNF561-AS1K7EIQ3 104 aa7.3□□□□□ -1.24
SKP1-208ENST00000521216 MAN2B1O00754 1011 aa7.3□□□□□ -1.24
SKP1-208ENST00000521216 SCDO00767 359 aa7.3□□□□□ -1.24
SKP1-208ENST00000521216 FARP2O94887 1054 aaPredicted RBP7.3□□□□□ -1.24
SKP1-208ENST00000521216 TMEM253P0C7T8 217 aa7.3□□□□□ -1.24
SKP1-208ENST00000521216 NCAM1P13591 858 aa7.3□□□□□ -1.24
SKP1-208ENST00000521216 CANXP27824 592 aaKnown RBP7.3□□□□□ -1.24
SKP1-208ENST00000521216 CDR1P51861 262 aa7.3□□□□□ -1.24
SKP1-208ENST00000521216 EPHB3P54753 998 aa7.3□□□□□ -1.24
SKP1-208ENST00000521216 TARBP2Q15633 366 aaKnown RBP7.3□□□□□ -1.24
SKP1-208ENST00000521216 BTBD8Q5XKL5 378 aa7.3□□□□□ -1.24
SKP1-208ENST00000521216 CD300LDQ6UXZ3 194 aa7.3□□□□□ -1.24
SKP1-208ENST00000521216 AMIGO3Q86WK7 504 aa7.3□□□□□ -1.24
SKP1-208ENST00000521216 MZB1Q8WU39 189 aa7.3□□□□□ -1.24
SKP1-208ENST00000521216 MTFR1LQ9H019 292 aa7.3□□□□□ -1.24
SKP1-208ENST00000521216 SPC25Q9HBM1 224 aa7.3□□□□□ -1.24
SKP1-208ENST00000521216 RIC8BQ9NVN3 520 aa7.3□□□□□ -1.24
SKP1-208ENST00000521216 FAN1Q9Y2M0 1017 aa7.3□□□□□ -1.24
SKP1-208ENST00000521216 PRKAB1Q9Y478 270 aa7.3□□□□□ -1.24
SKP1-208ENST00000521216 ATP23Q9Y6H3 246 aa7.3□□□□□ -1.24
SKP1-208ENST00000521216 PTPDC1A2A3K4 754 aa7.29□□□□□ -1.24
SKP1-208ENST00000521216 ANKRD62A6NC57 917 aa7.29□□□□□ -1.24
SKP1-208ENST00000521216 ETV2O00321 342 aaPredicted RBP7.29□□□□□ -1.24
SKP1-208ENST00000521216 DNAJC6O75061 913 aa7.29□□□□□ -1.24
SKP1-208ENST00000521216 SEMA7AO75326 666 aa7.29□□□□□ -1.24
SKP1-208ENST00000521216 PFKLP17858 780 aa7.29□□□□□ -1.24
SKP1-208ENST00000521216 MC3RP41968 323 aa7.29□□□□□ -1.24
SKP1-208ENST00000521216 DLG4P78352 724 aa7.29□□□□□ -1.24
SKP1-208ENST00000521216 SART3Q15020 963 aaKnown RBP7.29□□□□□ -1.24
SKP1-208ENST00000521216 SKOR2Q2VWA4 1001 aaPredicted RBP7.29□□□□□ -1.24
SKP1-208ENST00000521216 CPZQ66K79 652 aa7.29□□□□□ -1.24
SKP1-208ENST00000521216 PKN3Q6P5Z2 889 aa7.29□□□□□ -1.24
SKP1-208ENST00000521216 NXPE1Q8N323 547 aa7.29□□□□□ -1.24
SKP1-208ENST00000521216 FAM26EQ8N5C1 309 aa7.29□□□□□ -1.24
SKP1-208ENST00000521216 CHST14Q8NCH0 376 aa7.29□□□□□ -1.24
SKP1-208ENST00000521216 CHAC2Q8WUX2 184 aa7.29□□□□□ -1.24
SKP1-208ENST00000521216 FAM84AQ96KN4 292 aa7.29□□□□□ -1.24
SKP1-208ENST00000521216 SLC38A3Q99624 504 aa7.29□□□□□ -1.24
SKP1-208ENST00000521216 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.29□□□□□ -1.242e-6■■■□□ 18.4
SKP1-208ENST00000521216 IFT57Q9NWB7 429 aa7.29□□□□□ -1.24
SKP1-208ENST00000521216 ZKSCAN5Q9Y2L8 839 aa7.29□□□□□ -1.24
SKP1-208ENST00000521216 TELO2Q9Y4R8 837 aa7.29□□□□□ -1.24
SKP1-208ENST00000521216 FAM83GA6ND36 823 aa7.28□□□□□ -1.24
SKP1-208ENST00000521216 CBX4O00257 560 aa7.28□□□□□ -1.24
SKP1-208ENST00000521216 TRAF5O00463 557 aa7.28□□□□□ -1.24
SKP1-208ENST00000521216 BUB1BO60566 1050 aaPredicted RBP7.28□□□□□ -1.24
SKP1-208ENST00000521216 POU3F2P20265 443 aaPredicted RBP7.28□□□□□ -1.24
SKP1-208ENST00000521216 SOX5P35711 763 aa7.28□□□□□ -1.24
SKP1-208ENST00000521216 SCNN1BP51168 640 aa7.28□□□□□ -1.24
SKP1-208ENST00000521216 ZNF648Q5T619 568 aaPredicted RBP7.28□□□□□ -1.24
SKP1-208ENST00000521216 OGFOD2Q6N063 350 aa7.28□□□□□ -1.24
SKP1-208ENST00000521216 ZC3H18Q86VM9 953 aaKnown RBP7.28□□□□□ -1.24
SKP1-208ENST00000521216 THNSL2Q86YJ6 484 aa7.28□□□□□ -1.24
SKP1-208ENST00000521216 TOE1Q96GM8 510 aaKnown RBP7.28□□□□□ -1.24
SKP1-208ENST00000521216 CAAP1Q9H8G2 361 aa7.28□□□□□ -1.24
SKP1-208ENST00000521216 MAPRE3Q9UPY8 281 aa7.28□□□□□ -1.24
SKP1-208ENST00000521216 PCDHA5Q9Y5H7 936 aa7.28□□□□□ -1.24
SKP1-208ENST00000521216 ZNF891A8MT65 544 aaPredicted RBP7.27□□□□□ -1.25
SKP1-208ENST00000521216 N4BP3O15049 544 aa7.27□□□□□ -1.25
SKP1-208ENST00000521216 GAS7O60861 476 aa7.27□□□□□ -1.25
SKP1-208ENST00000521216 HIP1RO75146 1068 aa7.27□□□□□ -1.25
SKP1-208ENST00000521216 PTPN1P18031 435 aaKnown RBP7.27□□□□□ -1.25
SKP1-208ENST00000521216 STAT3P40763 770 aa7.27□□□□□ -1.25
SKP1-208ENST00000521216 IRF9Q00978 393 aa7.27□□□□□ -1.25
SKP1-208ENST00000521216 MESP2Q0VG99 397 aa7.27□□□□□ -1.25
SKP1-208ENST00000521216 SEPT7Q16181 437 aaKnown RBP7.27□□□□□ -1.25
SKP1-208ENST00000521216 ARHGAP44Q17R89 818 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms