RNA–Protein interactions for RNA: ENST00000521067.1

PABPC1-217, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-217ENST00000521067 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.44■■□□□ 1.34
PABPC1-217ENST00000521067 CYFIP1Q7L576 1253 aa23.44■■□□□ 1.34
PABPC1-217ENST00000521067 ZNF654Q8IZM8 581 aa23.44■■□□□ 1.34
PABPC1-217ENST00000521067 ZBED2Q9BTP6 218 aa23.44■■□□□ 1.34
PABPC1-217ENST00000521067 RNPEPQ9H4A4 650 aa23.44■■□□□ 1.34
PABPC1-217ENST00000521067 MEIS2O14770 477 aa23.43■■□□□ 1.34
PABPC1-217ENST00000521067 TREHO43280 583 aa23.43■■□□□ 1.34
PABPC1-217ENST00000521067 LGR5O75473 907 aa23.43■■□□□ 1.34
PABPC1-217ENST00000521067 SMIM10L2AP0DMW4 78 aa23.43■■□□□ 1.34
PABPC1-217ENST00000521067 SMIM10L2BP0DMW5 78 aa23.43■■□□□ 1.34
PABPC1-217ENST00000521067 THPOP40225 353 aa23.43■■□□□ 1.34
PABPC1-217ENST00000521067 FAM117BQ6P1L5 589 aa23.43■■□□□ 1.34
PABPC1-217ENST00000521067 DBF4BQ8NFT6 615 aa23.43■■□□□ 1.34
PABPC1-217ENST00000521067 MAP3K14Q99558 947 aa23.43■■□□□ 1.34
PABPC1-217ENST00000521067 RAD9AQ99638 391 aa23.43■■□□□ 1.34
PABPC1-217ENST00000521067 SPZ1Q9BXG8 430 aa23.43■■□□□ 1.34
PABPC1-217ENST00000521067 C17orf102A2RUQ5 167 aa23.42■■□□□ 1.34
PABPC1-217ENST00000521067 RSPH10B2B2RC85 870 aa23.42■■□□□ 1.34
PABPC1-217ENST00000521067 PLEKHA8P1O95397 391 aa23.42■■□□□ 1.34
PABPC1-217ENST00000521067 RSPH10BP0C881 870 aa23.42■■□□□ 1.34
PABPC1-217ENST00000521067 CMTR1Q8N1G2 835 aaKnown RBP23.42■■□□□ 1.34
PABPC1-217ENST00000521067 SRBD1Q8N5C6 995 aaKnown RBP23.42■■□□□ 1.34
PABPC1-217ENST00000521067 ATP6V0A1Q93050 837 aa23.42■■□□□ 1.34
PABPC1-217ENST00000521067 GPR20Q99678 358 aa23.42■■□□□ 1.34
PABPC1-217ENST00000521067 LSG1Q9H089 658 aaKnown RBP23.42■■□□□ 1.34
PABPC1-217ENST00000521067 LINC01553A4QN01 128 aa23.41■■□□□ 1.34
PABPC1-217ENST00000521067 PRC1O43663 620 aa23.41■■□□□ 1.34
PABPC1-217ENST00000521067 METTL7BQ6UX53 244 aa23.41■■□□□ 1.34
PABPC1-217ENST00000521067 TRIM50Q86XT4 487 aa23.41■■□□□ 1.34
PABPC1-217ENST00000521067 GDPD5Q8WTR4 605 aa23.41■■□□□ 1.34
PABPC1-217ENST00000521067 SUGCTQ9HAC7 445 aa23.41■■□□□ 1.34
PABPC1-217ENST00000521067 SETD4Q9NVD3 440 aa23.41■■□□□ 1.34
PABPC1-217ENST00000521067 FIBPO43427 364 aa23.4■■□□□ 1.34
PABPC1-217ENST00000521067 STAM2O75886 525 aa23.4■■□□□ 1.34
PABPC1-217ENST00000521067 DDAH1O94760 285 aa23.4■■□□□ 1.34
PABPC1-217ENST00000521067 NEDD9Q14511 834 aa23.4■■□□□ 1.34
PABPC1-217ENST00000521067 GNPTABQ3T906 1256 aa23.4■■□□□ 1.34
PABPC1-217ENST00000521067 CTCFLQ8NI51 663 aaPredicted RBP23.4■■□□□ 1.34
PABPC1-217ENST00000521067 RRP36Q96EU6 259 aaKnown RBP23.4■■□□□ 1.34
PABPC1-217ENST00000521067 USP26Q9BXU7 913 aa23.4■■□□□ 1.34
PABPC1-217ENST00000521067 MTUS1Q9ULD2 1270 aa23.4■■□□□ 1.34
PABPC1-217ENST00000521067 TCF20Q9UGU0 1960 aaKnown RBP23.4■■□□□ 1.34
PABPC1-217ENST00000521067 PIK3CDO00329 1044 aa23.39■■□□□ 1.33
PABPC1-217ENST00000521067 NOP56O00567 594 aaKnown RBP23.39■■□□□ 1.33
PABPC1-217ENST00000521067 SH2B2O14492 632 aaPredicted RBP23.39■■□□□ 1.33
PABPC1-217ENST00000521067 EFCAB14O75071 495 aa23.39■■□□□ 1.33
PABPC1-217ENST00000521067 RXRAP19793 462 aa23.39■■□□□ 1.33
PABPC1-217ENST00000521067 SMARCA1P28370 1054 aa23.39■■□□□ 1.33
PABPC1-217ENST00000521067 ERVK-21P61565 698 aa23.39■■□□□ 1.33
PABPC1-217ENST00000521067 PLEKHG4Q58EX7 1191 aa23.39■■□□□ 1.33
PABPC1-217ENST00000521067 PCNX4Q63HM2 1172 aa23.39■■□□□ 1.33
PABPC1-217ENST00000521067 IL27Q8NEV9 243 aa23.39■■□□□ 1.33
PABPC1-217ENST00000521067 SMARCC2Q8TAQ2 1214 aa23.39■■□□□ 1.33
PABPC1-217ENST00000521067 SLC27A2O14975 620 aa23.38■■□□□ 1.33
PABPC1-217ENST00000521067 KIF5BP33176 963 aa23.38■■□□□ 1.33
PABPC1-217ENST00000521067 ADAM17P78536 824 aa23.38■■□□□ 1.33
PABPC1-217ENST00000521067 RAB11FIP4Q86YS3 637 aa23.38■■□□□ 1.33
PABPC1-217ENST00000521067 EMSYQ7Z589 1322 aa23.37■■□□□ 1.33
PABPC1-217ENST00000521067 BRWD1Q9NSI6 2320 aa23.37■■□□□ 1.33
PABPC1-217ENST00000521067 hCG_1642624A0A1W2PR95 340 aa23.37■■□□□ 1.33
PABPC1-217ENST00000521067 ATP9AO75110 1047 aa23.37■■□□□ 1.33
PABPC1-217ENST00000521067 SP4Q02446 784 aa23.37■■□□□ 1.33
PABPC1-217ENST00000521067 UTP14CQ5TAP6 766 aaKnown RBP23.37■■□□□ 1.33
PABPC1-217ENST00000521067 CASC1Q6TDU7 716 aa23.37■■□□□ 1.33
PABPC1-217ENST00000521067 TGS1Q96RS0 853 aaKnown RBP23.37■■□□□ 1.33
PABPC1-217ENST00000521067 SENP7Q9BQF6 1050 aa23.37■■□□□ 1.33
PABPC1-217ENST00000521067 LZTS2Q9BRK4 669 aa23.37■■□□□ 1.33
PABPC1-217ENST00000521067 MTA3Q9BTC8 594 aa23.37■■□□□ 1.33
PABPC1-217ENST00000521067 COG5Q9UP83 839 aa23.37■■□□□ 1.33
PABPC1-217ENST00000521067 CTSHP09668 335 aa23.36■■□□□ 1.33
PABPC1-217ENST00000521067 MCM5P33992 734 aa23.36■■□□□ 1.33
PABPC1-217ENST00000521067 HTRA4P83105 476 aaPredicted RBP23.36■■□□□ 1.33
PABPC1-217ENST00000521067 NECTIN1Q15223 517 aa23.36■■□□□ 1.33
PABPC1-217ENST00000521067 AAK1Q2M2I8 961 aa23.36■■□□□ 1.33
PABPC1-217ENST00000521067 XRRA1Q6P2D8 792 aa23.36■■□□□ 1.33
PABPC1-217ENST00000521067 NFXL1Q6ZNB6 911 aa23.36■■□□□ 1.33
PABPC1-217ENST00000521067 MYOCDQ8IZQ8 938 aa23.36■■□□□ 1.33
PABPC1-217ENST00000521067 HLA-CQ95604 372 aa23.36■■□□□ 1.33
PABPC1-217ENST00000521067 C17orf80Q9BSJ5 609 aa23.36■■□□□ 1.33
PABPC1-217ENST00000521067 LRRC2Q9BYS8 371 aa23.36■■□□□ 1.33
PABPC1-217ENST00000521067 ITGB5P18084 799 aa23.35■■□□□ 1.33
PABPC1-217ENST00000521067 LIFRP42702 1097 aa23.35■■□□□ 1.33
PABPC1-217ENST00000521067 CREB3L3Q68CJ9 461 aa23.35■■□□□ 1.33
PABPC1-217ENST00000521067 TMTC2Q8N394 836 aa23.35■■□□□ 1.33
PABPC1-217ENST00000521067 CCDC82Q8N4S0 544 aa23.35■■□□□ 1.33
PABPC1-217ENST00000521067 CUL5Q93034 780 aa23.35■■□□□ 1.33
PABPC1-217ENST00000521067 TMEM87BQ96K49 555 aa23.35■■□□□ 1.33
PABPC1-217ENST00000521067 ESYT1Q9BSJ8 1104 aa23.35■■□□□ 1.33
PABPC1-217ENST00000521067 PSTPIP2Q9H939 334 aa23.35■■□□□ 1.33
PABPC1-217ENST00000521067 LMCD1Q9NZU5 365 aa23.35■■□□□ 1.33
PABPC1-217ENST00000521067 SEC63Q9UGP8 760 aaKnown RBP23.35■■□□□ 1.33
PABPC1-217ENST00000521067 INSL6Q9Y581 213 aa23.35■■□□□ 1.33
PABPC1-217ENST00000521067 CCDC69A6NI79 296 aa23.34■■□□□ 1.33
PABPC1-217ENST00000521067 AMHP03971 560 aa23.34■■□□□ 1.33
PABPC1-217ENST00000521067 KCNA2P16389 499 aa23.34■■□□□ 1.33
PABPC1-217ENST00000521067 GNAQP50148 359 aa23.34■■□□□ 1.33
PABPC1-217ENST00000521067 LMBR1Q8WVP7 490 aa23.34■■□□□ 1.33
PABPC1-217ENST00000521067 RAPGEFL1Q9UHV5 662 aa23.34■■□□□ 1.33
PABPC1-217ENST00000521067 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.33■■□□□ 1.33
PABPC1-217ENST00000521067 GSTTP1A0A1W2PQM5 241 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms