RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 AFMP43652 599 aa5.14□□□□□ -1.59
VPS13B-208ENST00000521037 ZNF252P-AS1Q0IIN9 211 aa5.14□□□□□ -1.59
VPS13B-208ENST00000521037 GRM2Q14416 872 aa5.14□□□□□ -1.59
VPS13B-208ENST00000521037 C7orf61Q8IZ16 206 aa5.14□□□□□ -1.59
VPS13B-208ENST00000521037 ZSCAN18Q8TBC5 510 aaPredicted RBP5.14□□□□□ -1.59
VPS13B-208ENST00000521037 MRRFQ96E11 262 aaKnown RBP5.14□□□□□ -1.59
VPS13B-208ENST00000521037 PHACTR3Q96KR7 559 aa5.14□□□□□ -1.59
VPS13B-208ENST00000521037 NECAB3Q96P71 396 aaPredicted RBP5.14□□□□□ -1.59
VPS13B-208ENST00000521037 PPP1R16BQ96T49 567 aa5.14□□□□□ -1.59
VPS13B-208ENST00000521037 EPHX3Q9H6B9 360 aa5.14□□□□□ -1.59
VPS13B-208ENST00000521037 KIAA1522Q9P206 1035 aaPredicted RBP5.14□□□□□ -1.59
VPS13B-208ENST00000521037 GABRQQ9UN88 632 aa5.14□□□□□ -1.59
VPS13B-208ENST00000521037 DNAH14Q0VDD8 3507 aa5.13□□□□□ -1.59
VPS13B-208ENST00000521037 SOWAHDA6NJG2 315 aa5.13□□□□□ -1.59
VPS13B-208ENST00000521037 B8ZZF3 427 aa5.13□□□□□ -1.59
VPS13B-208ENST00000521037 EOMESO95936 686 aa5.13□□□□□ -1.59
VPS13B-208ENST00000521037 NEFLP07196 543 aa5.13□□□□□ -1.59
VPS13B-208ENST00000521037 COL6A1P12109 1028 aa5.13□□□□□ -1.59
VPS13B-208ENST00000521037 HSP90B1P14625 803 aaKnown RBP5.13□□□□□ -1.59
VPS13B-208ENST00000521037 ZNF16P17020 682 aaPredicted RBP5.13□□□□□ -1.59
VPS13B-208ENST00000521037 BUD31P41223 144 aaPredicted RBP5.13□□□□□ -1.59
VPS13B-208ENST00000521037 IKZF1Q13422 519 aa5.13□□□□□ -1.59
VPS13B-208ENST00000521037 TCIRG1Q13488 830 aa5.13□□□□□ -1.59
VPS13B-208ENST00000521037 NBPF12Q5TAG4 269 aaPredicted RBP5.13□□□□□ -1.59
VPS13B-208ENST00000521037 ARMC9Q7Z3E5 817 aa5.13□□□□□ -1.59
VPS13B-208ENST00000521037 UBE3DQ7Z6J8 389 aa5.13□□□□□ -1.59
VPS13B-208ENST00000521037 TEPSINQ96N21 525 aa5.13□□□□□ -1.59
VPS13B-208ENST00000521037 DNAJC25Q9H1X3 360 aa5.13□□□□□ -1.59
VPS13B-208ENST00000521037 SEMA3GQ9NS98 782 aa5.13□□□□□ -1.59
VPS13B-208ENST00000521037 EGFL7Q9UHF1 273 aa5.13□□□□□ -1.59
VPS13B-208ENST00000521037 MUC6Q6W4X9 2439 aa5.13□□□□□ -1.59
VPS13B-208ENST00000521037 COL1A1P02452 1464 aaPredicted RBP5.13□□□□□ -1.59
VPS13B-208ENST00000521037 BTBD19C9JJ37 291 aa5.12□□□□□ -1.59
VPS13B-208ENST00000521037 EIF1AYO14602 144 aaKnown RBP5.12□□□□□ -1.59
VPS13B-208ENST00000521037 ABL1P00519 1130 aa5.12□□□□□ -1.59
VPS13B-208ENST00000521037 PRMT2P55345 433 aa5.12□□□□□ -1.59
VPS13B-208ENST00000521037 PRKCZQ05513 592 aa5.12□□□□□ -1.59
VPS13B-208ENST00000521037 SF3B3Q15393 1217 aaKnown RBP5.12□□□□□ -1.59
VPS13B-208ENST00000521037 PROSER3Q2NL68 480 aa5.12□□□□□ -1.59
VPS13B-208ENST00000521037 NLRP10Q86W26 655 aa5.12□□□□□ -1.59
VPS13B-208ENST00000521037 KIRREL1Q96J84 757 aa5.12□□□□□ -1.59
VPS13B-208ENST00000521037 DEFB129Q9H1M3 183 aa5.12□□□□□ -1.59
VPS13B-208ENST00000521037 TMEM39AQ9NV64 488 aa5.12□□□□□ -1.59
VPS13B-208ENST00000521037 GTF2IRD1Q9UHL9 959 aa5.12□□□□□ -1.59
VPS13B-208ENST00000521037 LTBP2Q14767 1821 aa5.11□□□□□ -1.59
VPS13B-208ENST00000521037 GNAT3A8MTJ3 354 aa5.11□□□□□ -1.59
VPS13B-208ENST00000521037 VAMP1P23763 118 aa5.11□□□□□ -1.59
VPS13B-208ENST00000521037 ARNTP27540 789 aa5.11□□□□□ -1.59
VPS13B-208ENST00000521037 GDNFP39905 211 aa5.11□□□□□ -1.59
VPS13B-208ENST00000521037 PSMC4P43686 418 aa5.11□□□□□ -1.59
VPS13B-208ENST00000521037 MRE11P49959 708 aa5.11□□□□□ -1.59
VPS13B-208ENST00000521037 CLCN7P51798 805 aa5.11□□□□□ -1.59
VPS13B-208ENST00000521037 TAF1CQ15572 869 aaPredicted RBP5.11□□□□□ -1.59
VPS13B-208ENST00000521037 C9orf50Q5SZB4 431 aa5.11□□□□□ -1.59
VPS13B-208ENST00000521037 CYFIP1Q7L576 1253 aa5.11□□□□□ -1.59
VPS13B-208ENST00000521037 CERS5Q8N5B7 392 aa5.11□□□□□ -1.59
VPS13B-208ENST00000521037 GPBAR1Q8TDU6 330 aa5.11□□□□□ -1.59
VPS13B-208ENST00000521037 EPS8L3Q8TE67 593 aaKnown RBP5.11□□□□□ -1.59
VPS13B-208ENST00000521037 KCNB2Q92953 911 aa5.11□□□□□ -1.59
VPS13B-208ENST00000521037 OPTNQ96CV9 577 aa5.11□□□□□ -1.59
VPS13B-208ENST00000521037 DEFB118Q96PH6 123 aa5.11□□□□□ -1.59
VPS13B-208ENST00000521037 ASB2Q96Q27 587 aa5.11□□□□□ -1.59
VPS13B-208ENST00000521037 KCNK12Q9HB15 430 aa5.11□□□□□ -1.59
VPS13B-208ENST00000521037 CD320Q9NPF0 282 aa5.11□□□□□ -1.59
VPS13B-208ENST00000521037 BRPF3Q9ULD4 1205 aa5.11□□□□□ -1.59
VPS13B-208ENST00000521037 FAM205AQ6ZU69 1335 aa5.11□□□□□ -1.59
VPS13B-208ENST00000521037 DDX60LQ5H9U9 1706 aaKnown RBP5.11□□□□□ -1.59
VPS13B-208ENST00000521037 VPS13AQ96RL7 3174 aa5.1□□□□□ -1.59
VPS13B-208ENST00000521037 CCL15-CCL14A0A0B4J2E2 113 aa5.1□□□□□ -1.59
VPS13B-208ENST00000521037 ZNF804BA4D1E1 1349 aa5.1□□□□□ -1.59
VPS13B-208ENST00000521037 RBAK-RBAKDNI3L0D1 243 aa5.1□□□□□ -1.59
VPS13B-208ENST00000521037 GPR182O15218 404 aa5.1□□□□□ -1.59
VPS13B-208ENST00000521037 NCOR1O75376 2440 aa5.1□□□□□ -1.59
VPS13B-208ENST00000521037 TCF3P15923 654 aa5.1□□□□□ -1.59
VPS13B-208ENST00000521037 TEFQ10587 303 aa5.1□□□□□ -1.59
VPS13B-208ENST00000521037 CCL15Q16663 113 aa5.1□□□□□ -1.59
VPS13B-208ENST00000521037 LRRC26Q2I0M4 334 aa5.1□□□□□ -1.59
VPS13B-208ENST00000521037 TMC4Q7Z404 712 aa5.1□□□□□ -1.59
VPS13B-208ENST00000521037 NGEFQ8N5V2 710 aa5.1□□□□□ -1.59
VPS13B-208ENST00000521037 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.1□□□□□ -1.59
VPS13B-208ENST00000521037 C20orf173Q96LM9 149 aa5.1□□□□□ -1.59
VPS13B-208ENST00000521037 UTP14AQ9BVJ6 771 aaKnown RBP5.1□□□□□ -1.59
VPS13B-208ENST00000521037 DMXL1Q9Y485 3027 aa5.1□□□□□ -1.59
VPS13B-208ENST00000521037 SNCAIPQ9Y6H5 919 aa5.1□□□□□ -1.59
VPS13B-208ENST00000521037 WDR87Q6ZQQ6 2873 aa5.09□□□□□ -1.59
VPS13B-208ENST00000521037 MYPNQ86TC9 1320 aa5.09□□□□□ -1.59
VPS13B-208ENST00000521037 MED14OSP0DP75 135 aa5.09□□□□□ -1.59
VPS13B-208ENST00000521037 KLRK1P26718 216 aa5.09□□□□□ -1.59
VPS13B-208ENST00000521037 SERPINB4P48594 390 aa5.09□□□□□ -1.59
VPS13B-208ENST00000521037 VGLL4Q14135 290 aa5.09□□□□□ -1.59
VPS13B-208ENST00000521037 DCTN1Q14203 1278 aa5.09□□□□□ -1.59
VPS13B-208ENST00000521037 SHHQ15465 462 aa5.09□□□□□ -1.59
VPS13B-208ENST00000521037 PARP10Q53GL7 1025 aa5.09□□□□□ -1.59
VPS13B-208ENST00000521037 TMEM67Q5HYA8 995 aa5.09□□□□□ -1.59
VPS13B-208ENST00000521037 PPM1JQ5JR12 505 aa5.09□□□□□ -1.59
VPS13B-208ENST00000521037 C22orf34Q6ZV56 151 aa5.09□□□□□ -1.59
VPS13B-208ENST00000521037 DDX46Q7L014 1031 aaKnown RBP5.09□□□□□ -1.59
VPS13B-208ENST00000521037 NECAB2Q7Z6G3 386 aa5.09□□□□□ -1.59
VPS13B-208ENST00000521037 NPAS4Q8IUM7 802 aa5.09□□□□□ -1.59
VPS13B-208ENST00000521037 SULF2Q8IWU5 870 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms