RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 CREB3L3Q68CJ9 461 aa22.65■■□□□ 1.22
PABPC1-215ENST00000520804 SERINC5Q86VE9 423 aa22.65■■□□□ 1.22
PABPC1-215ENST00000520804 C17orf102A2RUQ5 167 aa22.64■■□□□ 1.21
PABPC1-215ENST00000520804 EPOPA6NHQ4 379 aa22.64■■□□□ 1.21
PABPC1-215ENST00000520804 CALM1P0DP23 149 aa22.64■■□□□ 1.21
PABPC1-215ENST00000520804 CALM2P0DP24 149 aa22.64■■□□□ 1.21
PABPC1-215ENST00000520804 CALM3P0DP25 149 aa22.64■■□□□ 1.21
PABPC1-215ENST00000520804 HOXC8P31273 242 aa22.64■■□□□ 1.21
PABPC1-215ENST00000520804 MRPS5P82675 430 aaKnown RBP22.64■■□□□ 1.21
PABPC1-215ENST00000520804 PCNX4Q63HM2 1172 aa22.64■■□□□ 1.21
PABPC1-215ENST00000520804 XRRA1Q6P2D8 792 aa22.64■■□□□ 1.21
PABPC1-215ENST00000520804 CYFIP1Q7L576 1253 aa22.64■■□□□ 1.21
PABPC1-215ENST00000520804 TMCO2Q7Z6W1 182 aaPredicted RBP22.64■■□□□ 1.21
PABPC1-215ENST00000520804 MICALL1Q8N3F8 863 aa22.64■■□□□ 1.21
PABPC1-215ENST00000520804 ARNTL2Q8WYA1 636 aa22.64■■□□□ 1.21
PABPC1-215ENST00000520804 USP26Q9BXU7 913 aa22.64■■□□□ 1.21
PABPC1-215ENST00000520804 TSPYL2Q9H2G4 693 aaPredicted RBP22.64■■□□□ 1.21
PABPC1-215ENST00000520804 MTCH2Q9Y6C9 303 aa22.64■■□□□ 1.21
PABPC1-215ENST00000520804 GTPBP6O43824 516 aaPredicted RBP22.63■■□□□ 1.21
PABPC1-215ENST00000520804 EFCAB14O75071 495 aa22.63■■□□□ 1.21
PABPC1-215ENST00000520804 SMIM10L2AP0DMW4 78 aa22.63■■□□□ 1.21
PABPC1-215ENST00000520804 SMIM10L2BP0DMW5 78 aa22.63■■□□□ 1.21
PABPC1-215ENST00000520804 RXRAP19793 462 aa22.63■■□□□ 1.21
PABPC1-215ENST00000520804 IKBKEQ14164 716 aa22.63■■□□□ 1.21
PABPC1-215ENST00000520804 CMTR1Q8N1G2 835 aaKnown RBP22.63■■□□□ 1.21
PABPC1-215ENST00000520804 ATP6V0A1Q93050 837 aa22.63■■□□□ 1.21
PABPC1-215ENST00000520804 GPR20Q99678 358 aa22.63■■□□□ 1.21
PABPC1-215ENST00000520804 DOCK5Q9H7D0 1870 aa22.62■■□□□ 1.21
PABPC1-215ENST00000520804 EMSYQ7Z589 1322 aa22.62■■□□□ 1.21
PABPC1-215ENST00000520804 LGR5O75473 907 aa22.62■■□□□ 1.21
PABPC1-215ENST00000520804 THPOP40225 353 aa22.62■■□□□ 1.21
PABPC1-215ENST00000520804 SENP7Q9BQF6 1050 aa22.62■■□□□ 1.21
PABPC1-215ENST00000520804 ZBED2Q9BTP6 218 aa22.62■■□□□ 1.21
PABPC1-215ENST00000520804 RNPEPQ9H4A4 650 aa22.62■■□□□ 1.21
PABPC1-215ENST00000520804 ANO2Q9NQ90 1003 aa22.62■■□□□ 1.21
PABPC1-215ENST00000520804 SLC12A7Q9Y666 1083 aa22.62■■□□□ 1.21
PABPC1-215ENST00000520804 LCHNA4D1U4 455 aa22.61■■□□□ 1.21
PABPC1-215ENST00000520804 RSPH10B2B2RC85 870 aa22.61■■□□□ 1.21
PABPC1-215ENST00000520804 TREHO43280 583 aa22.61■■□□□ 1.21
PABPC1-215ENST00000520804 GJB5O95377 273 aa22.61■■□□□ 1.21
PABPC1-215ENST00000520804 RSPH10BP0C881 870 aa22.61■■□□□ 1.21
PABPC1-215ENST00000520804 NLRX1Q86UT6 975 aa22.61■■□□□ 1.21
PABPC1-215ENST00000520804 LRRC2Q9BYS8 371 aa22.61■■□□□ 1.21
PABPC1-215ENST00000520804 PSTPIP2Q9H939 334 aa22.61■■□□□ 1.21
PABPC1-215ENST00000520804 TELO2Q9Y4R8 837 aa22.61■■□□□ 1.21
PABPC1-215ENST00000520804 RBAK-RBAKDNI3L0D1 243 aa22.6■■□□□ 1.21
PABPC1-215ENST00000520804 SPRED2Q7Z698 418 aa22.6■■□□□ 1.21
PABPC1-215ENST00000520804 RAB11FIP4Q86YS3 637 aa22.6■■□□□ 1.21
PABPC1-215ENST00000520804 FANCBQ8NB91 859 aa22.6■■□□□ 1.21
PABPC1-215ENST00000520804 RAD9AQ99638 391 aa22.6■■□□□ 1.21
PABPC1-215ENST00000520804 TNFRSF10AO00220 468 aa22.59■■□□□ 1.21
PABPC1-215ENST00000520804 GRB10Q13322 594 aa22.59■■□□□ 1.21
PABPC1-215ENST00000520804 BMP2KLQ5H9B9 411 aa22.59■■□□□ 1.21
PABPC1-215ENST00000520804 KRT40Q6A162 431 aa22.59■■□□□ 1.21
PABPC1-215ENST00000520804 TMTC3Q6ZXV5 915 aa22.59■■□□□ 1.21
PABPC1-215ENST00000520804 SGMS1Q86VZ5 419 aa22.59■■□□□ 1.21
PABPC1-215ENST00000520804 TRIM50Q86XT4 487 aa22.59■■□□□ 1.21
PABPC1-215ENST00000520804 GIMAP8Q8ND71 665 aaPredicted RBP22.59■■□□□ 1.21
PABPC1-215ENST00000520804 DBF4BQ8NFT6 615 aa22.59■■□□□ 1.21
PABPC1-215ENST00000520804 ZNF215Q9UL58 517 aaPredicted RBP22.59■■□□□ 1.21
PABPC1-215ENST00000520804 TRANK1O15050 2925 aa22.58■■□□□ 1.21
PABPC1-215ENST00000520804 hCG_1642624A0A1W2PR95 340 aa22.58■■□□□ 1.21
PABPC1-215ENST00000520804 CAND2O75155 1236 aa22.58■■□□□ 1.21
PABPC1-215ENST00000520804 GNAT1P11488 350 aa22.58■■□□□ 1.21
PABPC1-215ENST00000520804 SP4Q02446 784 aa22.58■■□□□ 1.21
PABPC1-215ENST00000520804 MKRN4PQ13434 485 aaPredicted RBP22.58■■□□□ 1.21
PABPC1-215ENST00000520804 PLEKHG4Q58EX7 1191 aa22.58■■□□□ 1.21
PABPC1-215ENST00000520804 UTP14CQ5TAP6 766 aaKnown RBP22.58■■□□□ 1.21
PABPC1-215ENST00000520804 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.58■■□□□ 1.21
PABPC1-215ENST00000520804 CCDC82Q8N4S0 544 aa22.58■■□□□ 1.21
PABPC1-215ENST00000520804 ADAMTS19Q8TE59 1207 aa22.58■■□□□ 1.21
PABPC1-215ENST00000520804 GPRASP2Q96D09 838 aa22.58■■□□□ 1.21
PABPC1-215ENST00000520804 SETD4Q9NVD3 440 aa22.58■■□□□ 1.21
PABPC1-215ENST00000520804 COL4A4P53420 1690 aaPredicted RBP22.58■■□□□ 1.2
PABPC1-215ENST00000520804 TTC28Q96AY4 2481 aa22.57■■□□□ 1.2
PABPC1-215ENST00000520804 PRRC2BQ5JSZ5 2229 aaKnown RBP22.57■■□□□ 1.2
PABPC1-215ENST00000520804 LPXNO60711 386 aa22.57■■□□□ 1.2
PABPC1-215ENST00000520804 ATP9AO75110 1047 aa22.57■■□□□ 1.2
PABPC1-215ENST00000520804 ITGB5P18084 799 aa22.57■■□□□ 1.2
PABPC1-215ENST00000520804 SKIV2LQ15477 1246 aaKnown RBP22.57■■□□□ 1.2
PABPC1-215ENST00000520804 RNF20Q5VTR2 975 aa22.57■■□□□ 1.2
PABPC1-215ENST00000520804 MICU3Q86XE3 530 aa22.57■■□□□ 1.2
PABPC1-215ENST00000520804 CDHR1Q96JP9 859 aa22.57■■□□□ 1.2
PABPC1-215ENST00000520804 REV3LO60673 3130 aa22.56■■□□□ 1.2
PABPC1-215ENST00000520804 KCNA2P16389 499 aa22.56■■□□□ 1.2
PABPC1-215ENST00000520804 ADAM17P78536 824 aa22.56■■□□□ 1.2
PABPC1-215ENST00000520804 UBE2SQ16763 222 aa22.56■■□□□ 1.2
PABPC1-215ENST00000520804 FAM117BQ6P1L5 589 aa22.56■■□□□ 1.2
PABPC1-215ENST00000520804 SKAP1Q86WV1 359 aa22.56■■□□□ 1.2
PABPC1-215ENST00000520804 IL27Q8NEV9 243 aa22.56■■□□□ 1.2
PABPC1-215ENST00000520804 MUC3AQ02505 3323 aa22.56■■□□□ 1.2
PABPC1-215ENST00000520804 MICAL3Q7RTP6 2002 aa22.55■■□□□ 1.2
PABPC1-215ENST00000520804 LINC01553A4QN01 128 aa22.55■■□□□ 1.2
PABPC1-215ENST00000520804 SPDYE3A6NKU9 549 aa22.55■■□□□ 1.2
PABPC1-215ENST00000520804 AMHP03971 560 aa22.55■■□□□ 1.2
PABPC1-215ENST00000520804 CTSHP09668 335 aa22.55■■□□□ 1.2
PABPC1-215ENST00000520804 TCF7P36402 384 aaPredicted RBP22.55■■□□□ 1.2
PABPC1-215ENST00000520804 ERVK-21P61565 698 aa22.55■■□□□ 1.2
PABPC1-215ENST00000520804 ARHGAP4P98171 946 aa22.55■■□□□ 1.2
PABPC1-215ENST00000520804 TFF2Q03403 129 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms