RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 NLGN2Q8NFZ4 835 aa9.56□□□□□ -0.88
SDCBP-208ENST00000520228 SHISA4Q96DD7 197 aa9.56□□□□□ -0.88
SDCBP-208ENST00000520228 ASXL1Q8IXJ9 1541 aa9.56□□□□□ -0.88
SDCBP-208ENST00000520228 TONSLQ96HA7 1378 aa9.55□□□□□ -0.88
SDCBP-208ENST00000520228 C7orf72A4D263 438 aa9.55□□□□□ -0.88
SDCBP-208ENST00000520228 MEFVO15553 781 aaPredicted RBP9.55□□□□□ -0.88
SDCBP-208ENST00000520228 LILRA2Q8N149 483 aa9.55□□□□□ -0.88
SDCBP-208ENST00000520228 ASIC4Q96FT7 647 aa9.55□□□□□ -0.88
SDCBP-208ENST00000520228 PLCD4Q9BRC7 762 aa9.55□□□□□ -0.88
SDCBP-208ENST00000520228 ACSL6Q9UKU0 697 aa9.55□□□□□ -0.88
SDCBP-208ENST00000520228 MST1RQ04912 1400 aa9.55□□□□□ -0.88
SDCBP-208ENST00000520228 IFT172Q9UG01 1749 aa9.54□□□□□ -0.88
SDCBP-208ENST00000520228 BLACEA4D250 179 aa9.54□□□□□ -0.88
SDCBP-208ENST00000520228 WTIPA6NIX2 430 aaPredicted RBP9.54□□□□□ -0.88
SDCBP-208ENST00000520228 PSPNO60542 156 aa9.54□□□□□ -0.88
SDCBP-208ENST00000520228 TRHRP34981 398 aaPredicted RBP9.54□□□□□ -0.88
SDCBP-208ENST00000520228 LTBRP36941 435 aa9.54□□□□□ -0.88
SDCBP-208ENST00000520228 KCNAB2Q13303 367 aa9.54□□□□□ -0.88
SDCBP-208ENST00000520228 LAPTM5Q13571 262 aa9.54□□□□□ -0.88
SDCBP-208ENST00000520228 SDE2Q6IQ49 451 aa9.54□□□□□ -0.88
SDCBP-208ENST00000520228 STYK1Q6J9G0 422 aa9.54□□□□□ -0.88
SDCBP-208ENST00000520228 RSPO2Q6UXX9 243 aaPredicted RBP9.54□□□□□ -0.88
SDCBP-208ENST00000520228 USP53Q70EK8 1073 aa9.54□□□□□ -0.88
SDCBP-208ENST00000520228 DCAF4Q8WV16 495 aa9.54□□□□□ -0.88
SDCBP-208ENST00000520228 DIO2Q92813 273 aa9.54□□□□□ -0.88
SDCBP-208ENST00000520228 IPO9Q96P70 1041 aaKnown RBP9.54□□□□□ -0.88
SDCBP-208ENST00000520228 ORAI2Q96SN7 254 aa9.54□□□□□ -0.88
SDCBP-208ENST00000520228 FANCLQ9NW38 375 aa9.54□□□□□ -0.88
SDCBP-208ENST00000520228 XIRP1Q702N8 1843 aaKnown RBP9.54□□□□□ -0.88
SDCBP-208ENST00000520228 ADGRB1O14514 1584 aa9.54□□□□□ -0.88
SDCBP-208ENST00000520228 SETD1AO15047 1707 aaKnown RBP9.53□□□□□ -0.88
SDCBP-208ENST00000520228 LCP1P13796 627 aa9.53□□□□□ -0.88
SDCBP-208ENST00000520228 RAC2P15153 192 aa9.53□□□□□ -0.88
SDCBP-208ENST00000520228 AFMP43652 599 aa9.53□□□□□ -0.88
SDCBP-208ENST00000520228 FYB2Q5VWT5 728 aa9.53□□□□□ -0.88
SDCBP-208ENST00000520228 GALNT18Q6P9A2 607 aa9.53□□□□□ -0.88
SDCBP-208ENST00000520228 NLRX1Q86UT6 975 aa9.53□□□□□ -0.88
SDCBP-208ENST00000520228 HOMER1Q86YM7 354 aa9.53□□□□□ -0.88
SDCBP-208ENST00000520228 RCBTB1Q8NDN9 531 aa9.53□□□□□ -0.88
SDCBP-208ENST00000520228 MYLIPQ8WY64 445 aa9.53□□□□□ -0.88
SDCBP-208ENST00000520228 APPBP2Q92624 585 aa9.53□□□□□ -0.88
SDCBP-208ENST00000520228 NCOA5Q9HCD5 579 aaKnown RBP9.53□□□□□ -0.88
SDCBP-208ENST00000520228 C1orf167Q5SNV9 1468 aa9.53□□□□□ -0.88
SDCBP-208ENST00000520228 PPP1R11O60927 126 aaPredicted RBP9.52□□□□□ -0.89
SDCBP-208ENST00000520228 CORO7P57737 925 aa9.52□□□□□ -0.89
SDCBP-208ENST00000520228 KIR3DS1Q14943 382 aa9.52□□□□□ -0.89
SDCBP-208ENST00000520228 SNX17Q15036 470 aa9.52□□□□□ -0.89
SDCBP-208ENST00000520228 SLC14A2Q15849 920 aa9.52□□□□□ -0.89
SDCBP-208ENST00000520228 NBPF8Q3BBV2 869 aa9.52□□□□□ -0.89
SDCBP-208ENST00000520228 TRIM61Q5EBN2 209 aa9.52□□□□□ -0.89
SDCBP-208ENST00000520228 JAMLQ86YT9 394 aa9.52□□□□□ -0.89
SDCBP-208ENST00000520228 DPF3Q92784 378 aa9.52□□□□□ -0.89
SDCBP-208ENST00000520228 GPR27Q9NS67 375 aa9.52□□□□□ -0.89
SDCBP-208ENST00000520228 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.52□□□□□ -0.89
SDCBP-208ENST00000520228 IMPACTQ9P2X3 320 aa9.52□□□□□ -0.89
SDCBP-208ENST00000520228 LAMC1P11047 1609 aa9.52□□□□□ -0.89
SDCBP-208ENST00000520228 CLSPNQ9HAW4 1339 aa9.52□□□□□ -0.89
SDCBP-208ENST00000520228 KCNQ2O43526 872 aa9.51□□□□□ -0.89
SDCBP-208ENST00000520228 SMARCA5O60264 1052 aaPredicted RBP9.51□□□□□ -0.89
SDCBP-208ENST00000520228 ITGB5P18084 799 aa9.51□□□□□ -0.89
SDCBP-208ENST00000520228 MVKQ03426 396 aa9.51□□□□□ -0.89
SDCBP-208ENST00000520228 KCNT2Q6UVM3 1135 aa9.51□□□□□ -0.89
SDCBP-208ENST00000520228 SYNPOQ8N3V7 929 aa9.51□□□□□ -0.89
SDCBP-208ENST00000520228 DDX17Q92841 729 aaKnown RBP9.51□□□□□ -0.89
SDCBP-208ENST00000520228 PTPRN2Q92932 1015 aa9.51□□□□□ -0.89
SDCBP-208ENST00000520228 MRPL4Q9BYD3 311 aaKnown RBP9.51□□□□□ -0.89
SDCBP-208ENST00000520228 TAF6LQ9Y6J9 622 aa9.51□□□□□ -0.89
SDCBP-208ENST00000520228 DLC1Q96QB1 1528 aa9.51□□□□□ -0.89
SDCBP-208ENST00000520228 ROCK2O75116 1388 aaKnown RBP9.5□□□□□ -0.89
SDCBP-208ENST00000520228 PPP1R12AO14974 1030 aaPredicted RBP9.5□□□□□ -0.89
SDCBP-208ENST00000520228 NPHS1O60500 1241 aa9.5□□□□□ -0.89
SDCBP-208ENST00000520228 MSCO60682 206 aa9.5□□□□□ -0.89
SDCBP-208ENST00000520228 CDC45O75419 566 aa9.5□□□□□ -0.89
SDCBP-208ENST00000520228 PAPLNO95428 1278 aa9.5□□□□□ -0.89
SDCBP-208ENST00000520228 MSL3P1P0C860 447 aa9.5□□□□□ -0.89
SDCBP-208ENST00000520228 GABREP78334 506 aa9.5□□□□□ -0.89
SDCBP-208ENST00000520228 PLEKHG4Q58EX7 1191 aa9.5□□□□□ -0.89
SDCBP-208ENST00000520228 C16orf86Q6ZW13 317 aa9.5□□□□□ -0.89
SDCBP-208ENST00000520228 MAMDC2Q7Z304 686 aaPredicted RBP9.5□□□□□ -0.89
SDCBP-208ENST00000520228 GSTCDQ8NEC7 633 aa9.5□□□□□ -0.89
SDCBP-208ENST00000520228 ABHD4Q8TB40 342 aa9.5□□□□□ -0.89
SDCBP-208ENST00000520228 LRRC59Q96AG4 307 aaKnown RBP9.5□□□□□ -0.89
SDCBP-208ENST00000520228 ZFYVE21Q9BQ24 234 aa9.5□□□□□ -0.89
SDCBP-208ENST00000520228 PHF20Q9BVI0 1012 aa9.5□□□□□ -0.89
SDCBP-208ENST00000520228 JCADQ9P266 1359 aa9.5□□□□□ -0.89
SDCBP-208ENST00000520228 ROBO1Q9Y6N7 1651 aa9.49□□□□□ -0.89
SDCBP-208ENST00000520228 PLD2O14939 933 aa9.49□□□□□ -0.89
SDCBP-208ENST00000520228 ASMTLO95671 621 aa9.49□□□□□ -0.89
SDCBP-208ENST00000520228 TKFCQ3LXA3 575 aa9.49□□□□□ -0.89
SDCBP-208ENST00000520228 KIAA0907Q7Z7F0 614 aaPredicted RBP9.49□□□□□ -0.89
SDCBP-208ENST00000520228 KIRREL1Q96J84 757 aa9.49□□□□□ -0.89
SDCBP-208ENST00000520228 MTA3Q9BTC8 594 aa9.49□□□□□ -0.89
SDCBP-208ENST00000520228 RNF32Q9H0A6 362 aa9.49□□□□□ -0.89
SDCBP-208ENST00000520228 CRTAC1Q9NQ79 661 aa9.49□□□□□ -0.89
SDCBP-208ENST00000520228 FBXL7Q9UJT9 491 aa9.49□□□□□ -0.89
SDCBP-208ENST00000520228 CENPJQ9HC77 1338 aaPredicted RBP9.49□□□□□ -0.89
SDCBP-208ENST00000520228 PRKCAP17252 672 aa9.48□□□□□ -0.89
SDCBP-208ENST00000520228 HSD3B2P26439 372 aa9.48□□□□□ -0.89
SDCBP-208ENST00000520228 GPR85P60893 370 aa9.48□□□□□ -0.89
SDCBP-208ENST00000520228 CBX2Q14781 532 aaPredicted RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 395.1 ms