RNA–Protein interactions for RNA: ENST00000520008.5

POLB-208, Transcript of DNA polymerase beta, humanhuman

TSL 2

Gene POLB, Length 725 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-208ENST00000520008 RAD9AQ99638 391 aa13.65□□□□□ -0.22
POLB-208ENST00000520008 LMCD1Q9NZU5 365 aa13.65□□□□□ -0.22
POLB-208ENST00000520008 COG5Q9UP83 839 aa13.65□□□□□ -0.22
POLB-208ENST00000520008 ERICH2A1L162 156 aa13.64□□□□□ -0.23
POLB-208ENST00000520008 LINC01553A4QN01 128 aa13.64□□□□□ -0.23
POLB-208ENST00000520008 SPATA31C2B4DYI2 1134 aa13.64□□□□□ -0.23
POLB-208ENST00000520008 H3BRB1 525 aa13.64□□□□□ -0.23
POLB-208ENST00000520008 ERVK-21P61565 698 aa13.64□□□□□ -0.23
POLB-208ENST00000520008 IKBKEQ14164 716 aa13.64□□□□□ -0.23
POLB-208ENST00000520008 PLEKHG4Q58EX7 1191 aa13.64□□□□□ -0.23
POLB-208ENST00000520008 METTL7BQ6UX53 244 aa13.64□□□□□ -0.23
POLB-208ENST00000520008 RALYLQ86SE5 291 aaKnown RBP13.64□□□□□ -0.23
POLB-208ENST00000520008 FCHSD1Q86WN1 690 aa13.64□□□□□ -0.23
POLB-208ENST00000520008 IL27Q8NEV9 243 aa13.64□□□□□ -0.23
POLB-208ENST00000520008 GDPD5Q8WTR4 605 aa13.64□□□□□ -0.23
POLB-208ENST00000520008 SPZ1Q9BXG8 430 aa13.64□□□□□ -0.23
POLB-208ENST00000520008 TUT1Q9H6E5 874 aaKnown RBP13.64□□□□□ -0.23
POLB-208ENST00000520008 SUGCTQ9HAC7 445 aa13.64□□□□□ -0.23
POLB-208ENST00000520008 MLXIPQ9HAP2 919 aa13.64□□□□□ -0.23
POLB-208ENST00000520008 RSPH10B2B2RC85 870 aa13.63□□□□□ -0.23
POLB-208ENST00000520008 PIK3CDO00329 1044 aa13.63□□□□□ -0.23
POLB-208ENST00000520008 CAND2O75155 1236 aa13.63□□□□□ -0.23
POLB-208ENST00000520008 RSPH10BP0C881 870 aa13.63□□□□□ -0.23
POLB-208ENST00000520008 SMIM10L2AP0DMW4 78 aa13.63□□□□□ -0.23
POLB-208ENST00000520008 SMIM10L2BP0DMW5 78 aa13.63□□□□□ -0.23
POLB-208ENST00000520008 COL9A1P20849 921 aa13.63□□□□□ -0.23
POLB-208ENST00000520008 ADAM17P78536 824 aa13.63□□□□□ -0.23
POLB-208ENST00000520008 HTRA4P83105 476 aaPredicted RBP13.63□□□□□ -0.23
POLB-208ENST00000520008 SART3Q15020 963 aaKnown RBP13.63□□□□□ -0.23
POLB-208ENST00000520008 SKIV2LQ15477 1246 aaKnown RBP13.63□□□□□ -0.23
POLB-208ENST00000520008 GNPTABQ3T906 1256 aa13.63□□□□□ -0.23
POLB-208ENST00000520008 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.63□□□□□ -0.23
POLB-208ENST00000520008 DBF4BQ8NFT6 615 aa13.63□□□□□ -0.23
POLB-208ENST00000520008 SP7Q8TDD2 431 aaPredicted RBP13.63□□□□□ -0.23
POLB-208ENST00000520008 GPR20Q99678 358 aa13.63□□□□□ -0.23
POLB-208ENST00000520008 MTA3Q9BTC8 594 aa13.63□□□□□ -0.23
POLB-208ENST00000520008 ZBED2Q9BTP6 218 aa13.63□□□□□ -0.23
POLB-208ENST00000520008 USP26Q9BXU7 913 aa13.63□□□□□ -0.23
POLB-208ENST00000520008 RNPEPQ9H4A4 650 aa13.63□□□□□ -0.23
POLB-208ENST00000520008 LY9Q9HBG7 655 aa13.63□□□□□ -0.23
POLB-208ENST00000520008 TELO2Q9Y4R8 837 aa13.63□□□□□ -0.23
POLB-208ENST00000520008 C17orf102A2RUQ5 167 aa13.62□□□□□ -0.23
POLB-208ENST00000520008 MEIS2O14770 477 aa13.62□□□□□ -0.23
POLB-208ENST00000520008 TREHO43280 583 aa13.62□□□□□ -0.23
POLB-208ENST00000520008 FIBPO43427 364 aa13.62□□□□□ -0.23
POLB-208ENST00000520008 DDAH1O94760 285 aa13.62□□□□□ -0.23
POLB-208ENST00000520008 SMARCA1P28370 1054 aa13.62□□□□□ -0.23
POLB-208ENST00000520008 THPOP40225 353 aa13.62□□□□□ -0.23
POLB-208ENST00000520008 COL9A3Q14050 684 aaPredicted RBP13.62□□□□□ -0.23
POLB-208ENST00000520008 NEDD9Q14511 834 aa13.62□□□□□ -0.23
POLB-208ENST00000520008 PCNX4Q63HM2 1172 aa13.62□□□□□ -0.23
POLB-208ENST00000520008 CATIPQ7Z7H3 387 aa13.62□□□□□ -0.23
POLB-208ENST00000520008 ATP6V0A1Q93050 837 aa13.62□□□□□ -0.23
POLB-208ENST00000520008 HLA-CQ95604 372 aa13.62□□□□□ -0.23
POLB-208ENST00000520008 TGS1Q96RS0 853 aaKnown RBP13.62□□□□□ -0.23
POLB-208ENST00000520008 SENP7Q9BQF6 1050 aa13.62□□□□□ -0.23
POLB-208ENST00000520008 OSBPL7Q9BZF2 842 aa13.62□□□□□ -0.23
POLB-208ENST00000520008 BRWD1Q9NSI6 2320 aa13.62□□□□□ -0.23
POLB-208ENST00000520008 USP17L6PQ6QN14 398 aa13.61□□□□□ -0.23
POLB-208ENST00000520008 CYFIP1Q7L576 1253 aa13.61□□□□□ -0.23
POLB-208ENST00000520008 TRIM50Q86XT4 487 aa13.61□□□□□ -0.23
POLB-208ENST00000520008 ZNF654Q8IZM8 581 aa13.61□□□□□ -0.23
POLB-208ENST00000520008 MYL10Q9BUA6 226 aa13.61□□□□□ -0.23
POLB-208ENST00000520008 MTUS1Q9ULD2 1270 aa13.61□□□□□ -0.23
POLB-208ENST00000520008 INSL6Q9Y581 213 aa13.61□□□□□ -0.23
POLB-208ENST00000520008 RBM8AQ9Y5S9 174 aaKnown RBP13.61□□□□□ -0.23
POLB-208ENST00000520008 RALGAPA2Q2PPJ7 1873 aa13.61□□□□□ -0.23
POLB-208ENST00000520008 NLRC5Q86WI3 1866 aa13.61□□□□□ -0.23
POLB-208ENST00000520008 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.6□□□□□ -0.23
POLB-208ENST00000520008 NOP56O00567 594 aaKnown RBP13.6□□□□□ -0.23
POLB-208ENST00000520008 FAM117BQ6P1L5 589 aa13.6□□□□□ -0.23
POLB-208ENST00000520008 XRRA1Q6P2D8 792 aa13.6□□□□□ -0.23
POLB-208ENST00000520008 POTEHQ6S545 545 aa13.6□□□□□ -0.23
POLB-208ENST00000520008 LMBR1Q8WVP7 490 aa13.6□□□□□ -0.23
POLB-208ENST00000520008 C17orf80Q9BSJ5 609 aa13.6□□□□□ -0.23
POLB-208ENST00000520008 RTEL1Q9NZ71 1219 aa13.6□□□□□ -0.23
POLB-208ENST00000520008 SUPT16HQ9Y5B9 1047 aaKnown RBP13.6□□□□□ -0.23
POLB-208ENST00000520008 ATG2AQ2TAZ0 1938 aa13.59□□□□□ -0.23
POLB-208ENST00000520008 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.59□□□□□ -0.23
POLB-208ENST00000520008 SH2B2O14492 632 aaPredicted RBP13.59□□□□□ -0.23
POLB-208ENST00000520008 PLEKHA8P1O95397 391 aa13.59□□□□□ -0.23
POLB-208ENST00000520008 AMHP03971 560 aa13.59□□□□□ -0.23
POLB-208ENST00000520008 KIF5BP33176 963 aa13.59□□□□□ -0.23
POLB-208ENST00000520008 FAM26DQ5JW98 314 aa13.59□□□□□ -0.23
POLB-208ENST00000520008 MYOCDQ8IZQ8 938 aa13.59□□□□□ -0.23
POLB-208ENST00000520008 SRBD1Q8N5C6 995 aaKnown RBP13.59□□□□□ -0.23
POLB-208ENST00000520008 CTCFLQ8NI51 663 aaPredicted RBP13.59□□□□□ -0.23
POLB-208ENST00000520008 SMARCC2Q8TAQ2 1214 aa13.59□□□□□ -0.23
POLB-208ENST00000520008 PIBF1Q8WXW3 757 aa13.59□□□□□ -0.23
POLB-208ENST00000520008 TOP1MTQ969P6 601 aa13.59□□□□□ -0.23
POLB-208ENST00000520008 RRP36Q96EU6 259 aaKnown RBP13.59□□□□□ -0.23
POLB-208ENST00000520008 LSG1Q9H089 658 aaKnown RBP13.59□□□□□ -0.23
POLB-208ENST00000520008 SETD4Q9NVD3 440 aa13.59□□□□□ -0.23
POLB-208ENST00000520008 RAPGEFL1Q9UHV5 662 aa13.59□□□□□ -0.23
POLB-208ENST00000520008 PRC1O43663 620 aa13.58□□□□□ -0.24
POLB-208ENST00000520008 ATP9AO75110 1047 aa13.58□□□□□ -0.24
POLB-208ENST00000520008 CTSHP09668 335 aa13.58□□□□□ -0.24
POLB-208ENST00000520008 GNAT1P11488 350 aa13.58□□□□□ -0.24
POLB-208ENST00000520008 KCNA2P16389 499 aa13.58□□□□□ -0.24
POLB-208ENST00000520008 RPAINQ86UA6 219 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms