RNA–Protein interactions for RNA: ENST00000519768.5

CTNNA1-218, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-218ENST00000519768 DDX60LQ5H9U9 1706 aaKnown RBP6.2□□□□□ -1.42
CTNNA1-218ENST00000519768 SCO2A0A1W2PP80 73 aa6.2□□□□□ -1.42
CTNNA1-218ENST00000519768 TCP10L2B9ZVM9 353 aa6.2□□□□□ -1.42
CTNNA1-218ENST00000519768 PDHXO00330 501 aa6.2□□□□□ -1.42
CTNNA1-218ENST00000519768 TMPRSS2O15393 492 aa6.2□□□□□ -1.42
CTNNA1-218ENST00000519768 HTATSF1O43719 755 aaKnown RBP6.2□□□□□ -1.42
CTNNA1-218ENST00000519768 GAS2O43903 313 aaKnown RBP6.2□□□□□ -1.42
CTNNA1-218ENST00000519768 U2AF1L5P0DN76 240 aaPredicted RBP6.2□□□□□ -1.42
CTNNA1-218ENST00000519768 ERVK-24P63145 666 aa6.2□□□□□ -1.42
CTNNA1-218ENST00000519768 UBXN2AP68543 259 aa6.2□□□□□ -1.42
CTNNA1-218ENST00000519768 U2AF1Q01081 240 aaKnown RBP eCLIP6.2□□□□□ -1.42
CTNNA1-218ENST00000519768 LMNB2Q03252 620 aa6.2□□□□□ -1.42
CTNNA1-218ENST00000519768 NKAPLQ5M9Q1 402 aa6.2□□□□□ -1.42
CTNNA1-218ENST00000519768 FAM20CQ8IXL6 584 aa6.2□□□□□ -1.42
CTNNA1-218ENST00000519768 RNF34Q969K3 372 aa6.2□□□□□ -1.42
CTNNA1-218ENST00000519768 RHOVQ96L33 236 aa6.2□□□□□ -1.42
CTNNA1-218ENST00000519768 ATXN3LQ9H3M9 355 aa6.2□□□□□ -1.42
CTNNA1-218ENST00000519768 EPHX3Q9H6B9 360 aa6.2□□□□□ -1.42
CTNNA1-218ENST00000519768 KBTBD4Q9NVX7 518 aa6.2□□□□□ -1.42
CTNNA1-218ENST00000519768 CHPF2Q9P2E5 772 aa6.2□□□□□ -1.42
CTNNA1-218ENST00000519768 ZNF70Q9UC06 446 aaPredicted RBP6.2□□□□□ -1.42
CTNNA1-218ENST00000519768 GGT7Q9UJ14 662 aa6.2□□□□□ -1.42
CTNNA1-218ENST00000519768 PCDHA4Q9UN74 947 aa6.2□□□□□ -1.42
CTNNA1-218ENST00000519768 AP4E1Q9UPM8 1137 aa6.2□□□□□ -1.42
CTNNA1-218ENST00000519768 TLR6Q9Y2C9 796 aa6.2□□□□□ -1.42
CTNNA1-218ENST00000519768 PCDHB5Q9Y5E4 795 aa6.2□□□□□ -1.42
CTNNA1-218ENST00000519768 ACTL7BQ9Y614 415 aa6.2□□□□□ -1.42
CTNNA1-218ENST00000519768 SPEF2Q9C093 1822 aa6.2□□□□□ -1.42
CTNNA1-218ENST00000519768 MED23Q9ULK4 1368 aa6.19□□□□□ -1.42
CTNNA1-218ENST00000519768 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.19□□□□□ -1.42
CTNNA1-218ENST00000519768 PEX10O60683 326 aa6.19□□□□□ -1.42
CTNNA1-218ENST00000519768 BMP3P12645 472 aa6.19□□□□□ -1.42
CTNNA1-218ENST00000519768 GBP2P32456 591 aaPredicted RBP6.19□□□□□ -1.42
CTNNA1-218ENST00000519768 USP11P51784 963 aa6.19□□□□□ -1.42
CTNNA1-218ENST00000519768 PTPN11Q06124 597 aaPredicted RBP6.19□□□□□ -1.42
CTNNA1-218ENST00000519768 CAMK2GQ13555 558 aaPredicted RBP6.19□□□□□ -1.42
CTNNA1-218ENST00000519768 RSPO4Q2I0M5 234 aaPredicted RBP6.19□□□□□ -1.42
CTNNA1-218ENST00000519768 HSP90AB3PQ58FF7 597 aa6.19□□□□□ -1.42
CTNNA1-218ENST00000519768 DIEXFQ68CQ4 756 aaKnown RBP6.19□□□□□ -1.42
CTNNA1-218ENST00000519768 PRR23CQ6ZRP0 262 aa6.19□□□□□ -1.42
CTNNA1-218ENST00000519768 DYMQ7RTS9 669 aa6.19□□□□□ -1.42
CTNNA1-218ENST00000519768 CLEC10AQ8IUN9 316 aa6.19□□□□□ -1.42
CTNNA1-218ENST00000519768 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.19□□□□□ -1.42
CTNNA1-218ENST00000519768 PPM1EQ8WY54 764 aa6.19□□□□□ -1.42
CTNNA1-218ENST00000519768 EZH1Q92800 747 aaPredicted RBP6.19□□□□□ -1.42
CTNNA1-218ENST00000519768 LRFN3Q9BTN0 628 aa6.19□□□□□ -1.42
CTNNA1-218ENST00000519768 YIPF2Q9BWQ6 316 aa6.19□□□□□ -1.42
CTNNA1-218ENST00000519768 COA1Q9GZY4 146 aa6.19□□□□□ -1.42
CTNNA1-218ENST00000519768 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.19□□□□□ -1.42
CTNNA1-218ENST00000519768 CD209Q9NNX6 404 aa6.19□□□□□ -1.42
CTNNA1-218ENST00000519768 COPRSQ9NQ92 184 aa6.19□□□□□ -1.42
CTNNA1-218ENST00000519768 DISC1Q9NRI5 854 aa6.19□□□□□ -1.42
CTNNA1-218ENST00000519768 ECM29Q5VYK3 1845 aa6.19□□□□□ -1.42
CTNNA1-218ENST00000519768 CACNA1GO43497 2377 aa6.19□□□□□ -1.42
CTNNA1-218ENST00000519768 SPTBN4Q9H254 2564 aa6.19□□□□□ -1.42
CTNNA1-218ENST00000519768 CFAP54Q96N23 3096 aa6.19□□□□□ -1.42
CTNNA1-218ENST00000519768 PF4P02776 101 aa6.18□□□□□ -1.42
CTNNA1-218ENST00000519768 CETPP11597 493 aa6.18□□□□□ -1.42
CTNNA1-218ENST00000519768 COL6A1P12109 1028 aa6.18□□□□□ -1.42
CTNNA1-218ENST00000519768 FOSL2P15408 326 aa6.18□□□□□ -1.42
CTNNA1-218ENST00000519768 ASPAP45381 313 aa6.18□□□□□ -1.42
CTNNA1-218ENST00000519768 RING1Q06587 406 aa6.18□□□□□ -1.42
CTNNA1-218ENST00000519768 ANKRD18AQ8IVF6 992 aa6.18□□□□□ -1.42
CTNNA1-218ENST00000519768 PLBD2Q8NHP8 589 aa6.18□□□□□ -1.42
CTNNA1-218ENST00000519768 FANCD2OSQ96PS1 177 aa6.18□□□□□ -1.42
CTNNA1-218ENST00000519768 PLEKHF1Q96S99 279 aa6.18□□□□□ -1.42
CTNNA1-218ENST00000519768 C11orf49Q9H6J7 331 aa6.18□□□□□ -1.42
CTNNA1-218ENST00000519768 GREM2Q9H772 168 aa6.18□□□□□ -1.42
CTNNA1-218ENST00000519768 PHAXQ9H814 394 aaKnown RBP6.18□□□□□ -1.42
CTNNA1-218ENST00000519768 FAM105AQ9NUU6 356 aa6.18□□□□□ -1.42
CTNNA1-218ENST00000519768 RAXQ9Y2V3 346 aa6.18□□□□□ -1.42
CTNNA1-218ENST00000519768 PPP2R3BQ9Y5P8 575 aa6.18□□□□□ -1.42
CTNNA1-218ENST00000519768 COL1A1P02452 1464 aaPredicted RBP6.17□□□□□ -1.42
CTNNA1-218ENST00000519768 MINDY4BA8MYZ0 360 aa6.17□□□□□ -1.42
CTNNA1-218ENST00000519768 TAF5LO75529 589 aa6.17□□□□□ -1.42
CTNNA1-218ENST00000519768 MAP4P27816 1152 aaKnown RBP6.17□□□□□ -1.42
CTNNA1-218ENST00000519768 HOXD10P28358 340 aa6.17□□□□□ -1.42
CTNNA1-218ENST00000519768 SNAPC2Q13487 334 aa6.17□□□□□ -1.42
CTNNA1-218ENST00000519768 SEPT6Q14141 434 aa6.17□□□□□ -1.42
CTNNA1-218ENST00000519768 SGO2Q562F6 1265 aa6.17□□□□□ -1.42
CTNNA1-218ENST00000519768 CDPF1Q6NVV7 123 aa6.17□□□□□ -1.42
CTNNA1-218ENST00000519768 BEND4Q6ZU67 534 aa6.17□□□□□ -1.42
CTNNA1-218ENST00000519768 MIGA2Q7L4E1 593 aa6.17□□□□□ -1.42
CTNNA1-218ENST00000519768 HDXQ7Z353 690 aa6.17□□□□□ -1.42
CTNNA1-218ENST00000519768 ANKRD23Q86SG2 305 aa6.17□□□□□ -1.42
CTNNA1-218ENST00000519768 METTL16Q86W50 562 aaKnown RBP6.17□□□□□ -1.42
CTNNA1-218ENST00000519768 ZBTB38Q8NAP3 1195 aaPredicted RBP6.17□□□□□ -1.42
CTNNA1-218ENST00000519768 RNF214Q8ND24 703 aa6.17□□□□□ -1.42
CTNNA1-218ENST00000519768 TTLL11Q8NHH1 800 aa6.17□□□□□ -1.42
CTNNA1-218ENST00000519768 PNISRQ8TF01 805 aaKnown RBP6.17□□□□□ -1.42
CTNNA1-218ENST00000519768 GATAD2BQ8WXI9 593 aa6.17□□□□□ -1.42
CTNNA1-218ENST00000519768 FAM83CQ9BQN1 747 aa6.17□□□□□ -1.42
CTNNA1-218ENST00000519768 ACSS3Q9H6R3 686 aa6.17□□□□□ -1.42
CTNNA1-218ENST00000519768 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.17□□□□□ -1.42
CTNNA1-218ENST00000519768 STOML1Q9UBI4 398 aa6.17□□□□□ -1.42
CTNNA1-218ENST00000519768 TSPYL4Q9UJ04 414 aa6.17□□□□□ -1.42
CTNNA1-218ENST00000519768 TACC3Q9Y6A5 838 aa6.17□□□□□ -1.42
CTNNA1-218ENST00000519768 MYO3BQ8WXR4 1341 aa6.17□□□□□ -1.42
CTNNA1-218ENST00000519768 PLXNB2O15031 1838 aa6.16□□□□□ -1.42
CTNNA1-218ENST00000519768 DMDP11532 3685 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms