RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 PFKFB3Q16875 520 aaPredicted RBP10.72□□□□□ -0.69
HDAC3-215ENST00000519474 GNPTABQ3T906 1256 aa10.72□□□□□ -0.69
HDAC3-215ENST00000519474 OTOP2Q7RTS6 562 aa10.72□□□□□ -0.69
HDAC3-215ENST00000519474 NLRX1Q86UT6 975 aa10.72□□□□□ -0.69
HDAC3-215ENST00000519474 RETREG2Q8NC44 543 aa10.72□□□□□ -0.69
HDAC3-215ENST00000519474 CYP2W1Q8TAV3 490 aa10.72□□□□□ -0.69
HDAC3-215ENST00000519474 DHX38Q92620 1227 aaKnown RBP10.72□□□□□ -0.69
HDAC3-215ENST00000519474 GPRASP2Q96D09 838 aa10.72□□□□□ -0.69
HDAC3-215ENST00000519474 FAM161BQ96MY7 647 aa10.72□□□□□ -0.69
HDAC3-215ENST00000519474 GPR20Q99678 358 aa10.72□□□□□ -0.69
HDAC3-215ENST00000519474 LARP6Q9BRS8 491 aaKnown RBP10.72□□□□□ -0.69
HDAC3-215ENST00000519474 TM6SF1Q9BZW5 370 aa10.72□□□□□ -0.69
HDAC3-215ENST00000519474 TTYH1Q9H313 450 aaPredicted RBP10.72□□□□□ -0.69
HDAC3-215ENST00000519474 RNPEPQ9H4A4 650 aa10.72□□□□□ -0.69
HDAC3-215ENST00000519474 TUT1Q9H6E5 874 aaKnown RBP10.72□□□□□ -0.69
HDAC3-215ENST00000519474 JADE2Q9NQC1 790 aa10.72□□□□□ -0.69
HDAC3-215ENST00000519474 RANBP2P49792 3224 aaKnown RBP10.71□□□□□ -0.69
HDAC3-215ENST00000519474 GSTTP1A0A1W2PQM5 241 aa10.71□□□□□ -0.69
HDAC3-215ENST00000519474 SPDYE3A6NKU9 549 aa10.71□□□□□ -0.69
HDAC3-215ENST00000519474 RBAK-RBAKDNI3L0D1 243 aa10.71□□□□□ -0.69
HDAC3-215ENST00000519474 PITPNM1O00562 1244 aa10.71□□□□□ -0.69
HDAC3-215ENST00000519474 PPFIA3O75145 1194 aa10.71□□□□□ -0.69
HDAC3-215ENST00000519474 FOSP01100 380 aaPredicted RBP10.71□□□□□ -0.69
HDAC3-215ENST00000519474 ZNF286BP0CG31 522 aa10.71□□□□□ -0.69
HDAC3-215ENST00000519474 KCNA2P16389 499 aa10.71□□□□□ -0.69
HDAC3-215ENST00000519474 PBX2P40425 430 aa10.71□□□□□ -0.69
HDAC3-215ENST00000519474 CCT2P78371 535 aaKnown RBP10.71□□□□□ -0.69
HDAC3-215ENST00000519474 PSRC1Q6PGN9 363 aaPredicted RBP10.71□□□□□ -0.69
HDAC3-215ENST00000519474 METTL7BQ6UX53 244 aa10.71□□□□□ -0.69
HDAC3-215ENST00000519474 DEFB128Q7Z7B8 93 aa10.71□□□□□ -0.69
HDAC3-215ENST00000519474 C7orf31Q8N865 590 aa10.71□□□□□ -0.69
HDAC3-215ENST00000519474 PGBD1Q96JS3 809 aa10.71□□□□□ -0.69
HDAC3-215ENST00000519474 GUCD1Q96NT3 240 aa10.71□□□□□ -0.69
HDAC3-215ENST00000519474 MXRA8Q9BRK3 442 aa10.71□□□□□ -0.69
HDAC3-215ENST00000519474 KATNAL1Q9BW62 490 aa10.71□□□□□ -0.69
HDAC3-215ENST00000519474 TMEM260Q9NX78 707 aa10.71□□□□□ -0.69
HDAC3-215ENST00000519474 STXBP5LQ9Y2K9 1186 aa10.71□□□□□ -0.69
HDAC3-215ENST00000519474 hCG_1984214I3L0E3 225 aa10.7□□□□□ -0.7
HDAC3-215ENST00000519474 EDIL3O43854 480 aa10.7□□□□□ -0.7
HDAC3-215ENST00000519474 LGALS2P05162 132 aa10.7□□□□□ -0.7
HDAC3-215ENST00000519474 ARP10275 920 aa10.7□□□□□ -0.7
HDAC3-215ENST00000519474 CKBP12277 381 aa10.7□□□□□ -0.7
HDAC3-215ENST00000519474 SCG2P13521 617 aa10.7□□□□□ -0.7
HDAC3-215ENST00000519474 RBL2Q08999 1139 aa10.7□□□□□ -0.7
HDAC3-215ENST00000519474 PTK7Q13308 1070 aa10.7□□□□□ -0.7
HDAC3-215ENST00000519474 BFSP2Q13515 415 aa10.7□□□□□ -0.7
HDAC3-215ENST00000519474 TRIM71Q2Q1W2 868 aaKnown RBP10.7□□□□□ -0.7
HDAC3-215ENST00000519474 ZNF697Q5TEC3 545 aa10.7□□□□□ -0.7
HDAC3-215ENST00000519474 TEX2Q8IWB9 1127 aa10.7□□□□□ -0.7
HDAC3-215ENST00000519474 ZNF713Q8N859 430 aaPredicted RBP10.7□□□□□ -0.7
HDAC3-215ENST00000519474 SEPT1Q8WYJ6 367 aa10.7□□□□□ -0.7
HDAC3-215ENST00000519474 WNT8BQ93098 351 aa10.7□□□□□ -0.7
HDAC3-215ENST00000519474 PHKBQ93100 1093 aa10.7□□□□□ -0.7
HDAC3-215ENST00000519474 ZNF274Q96GC6 653 aaPredicted RBP10.7□□□□□ -0.7
HDAC3-215ENST00000519474 CDX2Q99626 313 aaPredicted RBP10.7□□□□□ -0.7
HDAC3-215ENST00000519474 ZMYND12Q9H0C1 365 aa10.7□□□□□ -0.7
HDAC3-215ENST00000519474 NCOA5Q9HCD5 579 aaKnown RBP10.7□□□□□ -0.7
HDAC3-215ENST00000519474 NOD1Q9Y239 953 aa10.7□□□□□ -0.7
HDAC3-215ENST00000519474 CYP46A1Q9Y6A2 500 aa10.7□□□□□ -0.7
HDAC3-215ENST00000519474 TRIP12Q14669 1992 aaPredicted RBP10.7□□□□□ -0.7
HDAC3-215ENST00000519474 MEIS1O00470 390 aa10.69□□□□□ -0.7
HDAC3-215ENST00000519474 NOP56O00567 594 aaKnown RBP10.69□□□□□ -0.7
HDAC3-215ENST00000519474 IFNAR1P17181 557 aa10.69□□□□□ -0.7
HDAC3-215ENST00000519474 DNAJB2P25686 324 aa10.69□□□□□ -0.7
HDAC3-215ENST00000519474 HOXC8P31273 242 aa10.69□□□□□ -0.7
HDAC3-215ENST00000519474 RFC2P35250 354 aa10.69□□□□□ -0.7
HDAC3-215ENST00000519474 ADCY7P51828 1080 aa10.69□□□□□ -0.7
HDAC3-215ENST00000519474 ADAM17P78536 824 aa10.69□□□□□ -0.7
HDAC3-215ENST00000519474 SP4Q02446 784 aa10.69□□□□□ -0.7
HDAC3-215ENST00000519474 ZNF618Q5T7W0 954 aa10.69□□□□□ -0.7
HDAC3-215ENST00000519474 UTP14CQ5TAP6 766 aaKnown RBP10.69□□□□□ -0.7
HDAC3-215ENST00000519474 JAKMIP3Q5VZ66 844 aa10.69□□□□□ -0.7
HDAC3-215ENST00000519474 PPP1R18Q6NYC8 613 aa10.69□□□□□ -0.7
HDAC3-215ENST00000519474 TRAF7Q6Q0C0 670 aa10.69□□□□□ -0.7
HDAC3-215ENST00000519474 GIMAP8Q8ND71 665 aaPredicted RBP10.69□□□□□ -0.7
HDAC3-215ENST00000519474 CAGE1Q8TC20 777 aa10.69□□□□□ -0.7
HDAC3-215ENST00000519474 CRYGNQ8WXF5 182 aa10.69□□□□□ -0.7
HDAC3-215ENST00000519474 CDHR1Q96JP9 859 aa10.69□□□□□ -0.7
HDAC3-215ENST00000519474 ANO3Q9BYT9 981 aa10.69□□□□□ -0.7
HDAC3-215ENST00000519474 PBX4Q9BYU1 374 aa10.69□□□□□ -0.7
HDAC3-215ENST00000519474 UPF3BQ9BZI7 483 aaKnown RBP10.69□□□□□ -0.7
HDAC3-215ENST00000519474 KCNH7Q9NS40 1196 aa10.69□□□□□ -0.7
HDAC3-215ENST00000519474 PDRG1Q9NUG6 133 aa10.69□□□□□ -0.7
HDAC3-215ENST00000519474 SETD4Q9NVD3 440 aa10.69□□□□□ -0.7
HDAC3-215ENST00000519474 NID2Q14112 1375 aa10.68□□□□□ -0.7
HDAC3-215ENST00000519474 SZT2Q5T011 3432 aa10.68□□□□□ -0.7
HDAC3-215ENST00000519474 ESYT2A0FGR8 921 aa10.68□□□□□ -0.7
HDAC3-215ENST00000519474 C17orf102A2RUQ5 167 aa10.68□□□□□ -0.7
HDAC3-215ENST00000519474 TREHO43280 583 aa10.68□□□□□ -0.7
HDAC3-215ENST00000519474 NBNO60934 754 aa10.68□□□□□ -0.7
HDAC3-215ENST00000519474 SEC24BO95487 1268 aa10.68□□□□□ -0.7
HDAC3-215ENST00000519474 PFKMP08237 780 aa10.68□□□□□ -0.7
HDAC3-215ENST00000519474 CYP3A4P08684 503 aa10.68□□□□□ -0.7
HDAC3-215ENST00000519474 SMIM10L2AP0DMW4 78 aa10.68□□□□□ -0.7
HDAC3-215ENST00000519474 SMIM10L2BP0DMW5 78 aa10.68□□□□□ -0.7
HDAC3-215ENST00000519474 SELPP16109 830 aa10.68□□□□□ -0.7
HDAC3-215ENST00000519474 SREBF1P36956 1147 aa10.68□□□□□ -0.7
HDAC3-215ENST00000519474 MTMR1Q13613 665 aa10.68□□□□□ -0.7
HDAC3-215ENST00000519474 GRIN2CQ14957 1233 aa10.68□□□□□ -0.7
HDAC3-215ENST00000519474 TCTN1Q2MV58 587 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms