RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	27.63	■■■□□ 2.01
CNOT7-204	ENST00000518885	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	27.63	■■■□□ 2.01
CNOT7-204	ENST00000518885		H3BRB1	525 aa		27.63	■■■□□ 2.01
CNOT7-204	ENST00000518885	SEMA3F	Q13275	785 aa		27.63	■■■□□ 2.01
CNOT7-204	ENST00000518885	TOB2	Q14106	344 aa	Predicted RBP	27.63	■■■□□ 2.01
CNOT7-204	ENST00000518885	TYW1B	Q6NUM6	668 aa		27.63	■■■□□ 2.01
CNOT7-204	ENST00000518885	SLC26A6	Q9BXS9	759 aa		27.63	■■■□□ 2.01
CNOT7-204	ENST00000518885	ANO3	Q9BYT9	981 aa		27.63	■■■□□ 2.01
CNOT7-204	ENST00000518885	WNT8A	Q9H1J5	351 aa		27.63	■■■□□ 2.01
CNOT7-204	ENST00000518885	TUT1	Q9H6E5	874 aa	Known RBP	27.63	■■■□□ 2.01
CNOT7-204	ENST00000518885	JADE2	Q9NQC1	790 aa		27.63	■■■□□ 2.01
CNOT7-204	ENST00000518885	HDAC6	Q9UBN7	1215 aa		27.63	■■■□□ 2.01
CNOT7-204	ENST00000518885	PARN	O95453	639 aa	Known RBP	27.62	■■■□□ 2.01
CNOT7-204	ENST00000518885	LGALS2	P05162	132 aa		27.62	■■■□□ 2.01
CNOT7-204	ENST00000518885	ITGB5	P18084	799 aa		27.62	■■■□□ 2.01
CNOT7-204	ENST00000518885	CCT2	P78371	535 aa	Known RBP	27.62	■■■□□ 2.01
CNOT7-204	ENST00000518885	ANKRD1	Q15327	319 aa		27.62	■■■□□ 2.01
CNOT7-204	ENST00000518885	ZNF697	Q5TEC3	545 aa		27.62	■■■□□ 2.01
CNOT7-204	ENST00000518885	GDF6	Q6KF10	455 aa	Predicted RBP	27.62	■■■□□ 2.01
CNOT7-204	ENST00000518885	ZNF365	Q70YC5	407 aa		27.62	■■■□□ 2.01
CNOT7-204	ENST00000518885	AFAP1L1	Q8TED9	768 aa		27.62	■■■□□ 2.01
CNOT7-204	ENST00000518885	PHKB	Q93100	1093 aa		27.62	■■■□□ 2.01
CNOT7-204	ENST00000518885	GPR20	Q99678	358 aa		27.62	■■■□□ 2.01
CNOT7-204	ENST00000518885	ZMYND12	Q9H0C1	365 aa		27.62	■■■□□ 2.01
CNOT7-204	ENST00000518885	UMODL1	Q5DID0	1318 aa		27.62	■■■□□ 2.01
CNOT7-204	ENST00000518885	MYH7B	A7E2Y1	1941 aa		27.61	■■■□□ 2.01
CNOT7-204	ENST00000518885	ACR	P10323	421 aa		27.61	■■■□□ 2.01
CNOT7-204	ENST00000518885	GNAT1	P11488	350 aa		27.61	■■■□□ 2.01
CNOT7-204	ENST00000518885	ACTN1	P12814	892 aa		27.61	■■■□□ 2.01
CNOT7-204	ENST00000518885	ZNF76	P36508	570 aa		27.61	■■■□□ 2.01
CNOT7-204	ENST00000518885	SSRP1	Q08945	709 aa	Known RBP	27.61	■■■□□ 2.01
CNOT7-204	ENST00000518885	REXO1	Q8N1G1	1221 aa	Known RBP	27.61	■■■□□ 2.01
CNOT7-204	ENST00000518885	HERVK_113	Q902F9	699 aa		27.61	■■■□□ 2.01
CNOT7-204	ENST00000518885	MXRA8	Q9BRK3	442 aa		27.61	■■■□□ 2.01
CNOT7-204	ENST00000518885	C16orf70	Q9BSU1	422 aa		27.61	■■■□□ 2.01
CNOT7-204	ENST00000518885	CDKL5	O76039	1030 aa		27.6	■■■□□ 2.01
CNOT7-204	ENST00000518885	SREBF1	P36956	1147 aa		27.6	■■■□□ 2.01
CNOT7-204	ENST00000518885	CLK2	P49760	499 aa	Known RBP	27.6	■■■□□ 2.01
CNOT7-204	ENST00000518885	PTK7	Q13308	1070 aa		27.6	■■■□□ 2.01
CNOT7-204	ENST00000518885	NTRK3	Q16288	839 aa		27.6	■■■□□ 2.01
CNOT7-204	ENST00000518885	C16orf59	Q7L2K0	433 aa		27.6	■■■□□ 2.01
CNOT7-204	ENST00000518885	SDF4	Q9BRK5	362 aa		27.6	■■■□□ 2.01
CNOT7-204	ENST00000518885	SH3GLB2	Q9NR46	395 aa		27.6	■■■□□ 2.01
CNOT7-204	ENST00000518885	TMEM265	A0A087WTH1	108 aa		27.59	■■■□□ 2.01
CNOT7-204	ENST00000518885	KCNA2	P16389	499 aa		27.59	■■■□□ 2.01
CNOT7-204	ENST00000518885	CEP55	Q53EZ4	464 aa		27.59	■■■□□ 2.01
CNOT7-204	ENST00000518885	FAM177A1	Q8N128	213 aa	Predicted RBP	27.59	■■■□□ 2.01
CNOT7-204	ENST00000518885	PPP1R13L	Q8WUF5	828 aa		27.59	■■■□□ 2.01
CNOT7-204	ENST00000518885	SCLY	Q96I15	445 aa		27.59	■■■□□ 2.01
CNOT7-204	ENST00000518885	NCOA5	Q9HCD5	579 aa	Known RBP	27.59	■■■□□ 2.01
CNOT7-204	ENST00000518885	C17orf102	A2RUQ5	167 aa		27.58	■■■□□ 2.01
CNOT7-204	ENST00000518885	IQCF3	P0C7M6	154 aa		27.58	■■■□□ 2.01
CNOT7-204	ENST00000518885	SP4	Q02446	784 aa		27.58	■■■□□ 2.01
CNOT7-204	ENST00000518885	PKN1	Q16512	942 aa		27.58	■■■□□ 2.01
CNOT7-204	ENST00000518885	NIPA1	Q7RTP0	329 aa		27.58	■■■□□ 2.01
CNOT7-204	ENST00000518885	SEPT1	Q8WYJ6	367 aa		27.58	■■■□□ 2.01
CNOT7-204	ENST00000518885	DEXI	O95424	95 aa		27.57	■■■□□ 2
CNOT7-204	ENST00000518885	SELP	P16109	830 aa		27.57	■■■□□ 2
CNOT7-204	ENST00000518885	ARHGAP4	P98171	946 aa		27.57	■■■□□ 2
CNOT7-204	ENST00000518885	RBL2	Q08999	1139 aa		27.57	■■■□□ 2
CNOT7-204	ENST00000518885	RASIP1	Q5U651	963 aa		27.57	■■■□□ 2
CNOT7-204	ENST00000518885	TNPO1	Q92973	898 aa	Known RBP	27.57	■■■□□ 2
CNOT7-204	ENST00000518885	JPH1	Q9HDC5	661 aa	Predicted RBP	27.57	■■■□□ 2
CNOT7-204	ENST00000518885	KCNH7	Q9NS40	1196 aa		27.57	■■■□□ 2
CNOT7-204	ENST00000518885	LAMA2	P24043	3122 aa	Known RBP	27.57	■■■□□ 2
CNOT7-204	ENST00000518885	TCF7	P36402	384 aa	Predicted RBP	27.56	■■■□□ 2
CNOT7-204	ENST00000518885	UTP14C	Q5TAP6	766 aa	Known RBP	27.56	■■■□□ 2
CNOT7-204	ENST00000518885	JAKMIP3	Q5VZ66	844 aa		27.56	■■■□□ 2
CNOT7-204	ENST00000518885	OTOP2	Q7RTS6	562 aa		27.56	■■■□□ 2
CNOT7-204	ENST00000518885	PGBD1	Q96JS3	809 aa		27.56	■■■□□ 2
CNOT7-204	ENST00000518885	FTO	Q9C0B1	505 aa	Known RBP eCLIP	27.56	■■■□□ 2
CNOT7-204	ENST00000518885	BCAS3	Q9H6U6	928 aa		27.56	■■■□□ 2
CNOT7-204	ENST00000518885	TMEM260	Q9NX78	707 aa		27.56	■■■□□ 2
CNOT7-204	ENST00000518885	NFASC	O94856	1347 aa		27.56	■■■□□ 2
CNOT7-204	ENST00000518885	ATP9A	O75110	1047 aa		27.55	■■■□□ 2
CNOT7-204	ENST00000518885	SMIM10L2A	P0DMW4	78 aa		27.55	■■■□□ 2
CNOT7-204	ENST00000518885	SMIM10L2B	P0DMW5	78 aa		27.55	■■■□□ 2
CNOT7-204	ENST00000518885	LRRC8D	Q7L1W4	858 aa		27.55	■■■□□ 2
CNOT7-204	ENST00000518885	DEFB128	Q7Z7B8	93 aa		27.55	■■■□□ 2
CNOT7-204	ENST00000518885	C22orf23	Q9BZE7	217 aa		27.55	■■■□□ 2
CNOT7-204	ENST00000518885	SLK	Q9H2G2	1235 aa	Predicted RBP	27.55	■■■□□ 2
CNOT7-204	ENST00000518885	ERAP1	Q9NZ08	941 aa		27.55	■■■□□ 2
CNOT7-204	ENST00000518885	PKD2L1	Q9P0L9	805 aa		27.55	■■■□□ 2
CNOT7-204	ENST00000518885	SLC9A2	Q9UBY0	812 aa		27.55	■■■□□ 2
CNOT7-204	ENST00000518885	SLC4A7	Q9Y6M7	1214 aa		27.55	■■■□□ 2
CNOT7-204	ENST00000518885	ZBBX	A8MT70	800 aa		27.54	■■■□□ 2
CNOT7-204	ENST00000518885	MEIS1	O00470	390 aa		27.54	■■■□□ 2
CNOT7-204	ENST00000518885	CYP3A4	P08684	503 aa		27.54	■■■□□ 2
CNOT7-204	ENST00000518885	NLRP5	P59047	1200 aa		27.54	■■■□□ 2
CNOT7-204	ENST00000518885	SET	Q01105	290 aa	Predicted RBP	27.54	■■■□□ 2
CNOT7-204	ENST00000518885	STK3	Q13188	491 aa		27.54	■■■□□ 2
CNOT7-204	ENST00000518885		Q7L0L9	218 aa		27.54	■■■□□ 2
CNOT7-204	ENST00000518885	GLG1	Q92896	1179 aa		27.54	■■■□□ 2
CNOT7-204	ENST00000518885	ATP6V0A1	Q93050	837 aa		27.54	■■■□□ 2
CNOT7-204	ENST00000518885	SMARCAD1	Q9H4L7	1026 aa		27.54	■■■□□ 2
CNOT7-204	ENST00000518885	AZI2	Q9H6S1	392 aa		27.54	■■■□□ 2
CNOT7-204	ENST00000518885	MTMR10	Q9NXD2	777 aa		27.54	■■■□□ 2
CNOT7-204	ENST00000518885	TCEAL9	Q9UHQ7	104 aa		27.54	■■■□□ 2
CNOT7-204	ENST00000518885	XBP1	P17861	261 aa		27.53	■■■□□ 2
CNOT7-204	ENST00000518885	RAB30	Q15771	203 aa		27.53	■■■□□ 2

Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms