RNA–Protein interactions for RNA: ENST00000518151.1

CSMD1-203, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 334 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-203ENST00000518151 IL13P35225 146 aa6.9□□□□□ -1.3
CSMD1-203ENST00000518151 ADAM17P78536 824 aa6.9□□□□□ -1.3
CSMD1-203ENST00000518151 KIZQ2M2Z5 673 aa6.9□□□□□ -1.3
CSMD1-203ENST00000518151 ST13P5Q8NFI4 369 aaPredicted RBP6.9□□□□□ -1.3
CSMD1-203ENST00000518151 DCAF4Q8WV16 495 aa6.9□□□□□ -1.3
CSMD1-203ENST00000518151 PHF20Q9BVI0 1012 aa6.9□□□□□ -1.3
CSMD1-203ENST00000518151 ASH2LQ9UBL3 628 aa6.9□□□□□ -1.3
CSMD1-203ENST00000518151 LAMTOR5O43504 91 aa6.89□□□□□ -1.31
CSMD1-203ENST00000518151 DLX3O60479 287 aa6.89□□□□□ -1.31
CSMD1-203ENST00000518151 FGFR1P11362 822 aa6.89□□□□□ -1.31
CSMD1-203ENST00000518151 SPIRE1Q08AE8 756 aa6.89□□□□□ -1.31
CSMD1-203ENST00000518151 CPZQ66K79 652 aa6.89□□□□□ -1.31
CSMD1-203ENST00000518151 LRRC47Q8N1G4 583 aaKnown RBP6.89□□□□□ -1.31
CSMD1-203ENST00000518151 CELF2-AS1Q8N7Q2 184 aa6.89□□□□□ -1.31
CSMD1-203ENST00000518151 CHST13Q8NET6 341 aa6.89□□□□□ -1.31
CSMD1-203ENST00000518151 ZSWIM3Q96MP5 696 aa6.89□□□□□ -1.31
CSMD1-203ENST00000518151 YTHDC1Q96MU7 727 aaKnown RBP6.89□□□□□ -1.31
CSMD1-203ENST00000518151 CDIP1Q9H305 208 aa6.89□□□□□ -1.31
CSMD1-203ENST00000518151 CROTQ9UKG9 612 aa6.89□□□□□ -1.31
CSMD1-203ENST00000518151 PUM1Q14671 1186 aaKnown RBP eCLIP6.88□□□□□ -1.31
CSMD1-203ENST00000518151 VASNQ6EMK4 673 aa6.88□□□□□ -1.31
CSMD1-203ENST00000518151 PIP4K2CQ8TBX8 421 aa6.88□□□□□ -1.31
CSMD1-203ENST00000518151 BARX1Q9HBU1 254 aaPredicted RBP6.88□□□□□ -1.31
CSMD1-203ENST00000518151 KLF4O43474 513 aa6.87□□□□□ -1.31
CSMD1-203ENST00000518151 GRK2P25098 689 aa6.87□□□□□ -1.31
CSMD1-203ENST00000518151 GRK3P35626 688 aa6.87□□□□□ -1.31
CSMD1-203ENST00000518151 LBX2Q6XYB7 198 aa6.87□□□□□ -1.31
CSMD1-203ENST00000518151 OTOP3Q7RTS5 596 aa6.87□□□□□ -1.31
CSMD1-203ENST00000518151 KLHL36Q8N4N3 616 aa6.87□□□□□ -1.31
CSMD1-203ENST00000518151 ZNF669Q96BR6 464 aaPredicted RBP6.87□□□□□ -1.31
CSMD1-203ENST00000518151 JAM3Q9BX67 310 aa6.87□□□□□ -1.31
CSMD1-203ENST00000518151 C1QTNF3Q9BXJ4 246 aa6.87□□□□□ -1.31
CSMD1-203ENST00000518151 DLL4Q9NR61 685 aa6.87□□□□□ -1.31
CSMD1-203ENST00000518151 C1QTNF3-AMACRE9PGA6 284 aa6.86□□□□□ -1.31
CSMD1-203ENST00000518151 PRODHO43272 600 aa6.86□□□□□ -1.31
CSMD1-203ENST00000518151 B4GALT3O60512 393 aa6.86□□□□□ -1.31
CSMD1-203ENST00000518151 MSCO60682 206 aa6.86□□□□□ -1.31
CSMD1-203ENST00000518151 CHGBP05060 677 aa6.86□□□□□ -1.31
CSMD1-203ENST00000518151 GNAT1P11488 350 aa6.86□□□□□ -1.31
CSMD1-203ENST00000518151 PABPC1P11940 636 aaKnown RBP6.86□□□□□ -1.31
CSMD1-203ENST00000518151 MLLT6P55198 1093 aaPredicted RBP6.86□□□□□ -1.31
CSMD1-203ENST00000518151 PKN3Q6P5Z2 889 aa6.86□□□□□ -1.31
CSMD1-203ENST00000518151 TRMT10BQ6PF06 316 aaKnown RBP6.86□□□□□ -1.31
CSMD1-203ENST00000518151 TMC5Q6UXY8 1006 aa6.86□□□□□ -1.31
CSMD1-203ENST00000518151 NSMFQ6X4W1 530 aa6.86□□□□□ -1.31
CSMD1-203ENST00000518151 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.86□□□□□ -1.31
CSMD1-203ENST00000518151 C8orf49Q96NF6 230 aa6.86□□□□□ -1.31
CSMD1-203ENST00000518151 TRIM55Q9BYV6 548 aa6.86□□□□□ -1.31
CSMD1-203ENST00000518151 TRAV20A0A0B4J274 112 aa6.85□□□□□ -1.31
CSMD1-203ENST00000518151 SLC27A2O14975 620 aa6.85□□□□□ -1.31
CSMD1-203ENST00000518151 GPR85P60893 370 aa6.85□□□□□ -1.31
CSMD1-203ENST00000518151 IFRD2Q12894 506 aaPredicted RBP6.85□□□□□ -1.31
CSMD1-203ENST00000518151 RAB33AQ14088 237 aa6.85□□□□□ -1.31
CSMD1-203ENST00000518151 STYK1Q6J9G0 422 aa6.85□□□□□ -1.31
CSMD1-203ENST00000518151 ARHGEF18Q6ZSZ5 1173 aa6.85□□□□□ -1.31
CSMD1-203ENST00000518151 KBTBD2Q8IY47 623 aa6.85□□□□□ -1.31
CSMD1-203ENST00000518151 IFNL3Q8IZI9 196 aa6.85□□□□□ -1.31
CSMD1-203ENST00000518151 UHMK1Q8TAS1 419 aaKnown RBP6.85□□□□□ -1.31
CSMD1-203ENST00000518151 ZCCHC14Q8WYQ9 949 aaKnown RBP6.85□□□□□ -1.31
CSMD1-203ENST00000518151 DVL3Q92997 716 aaPredicted RBP6.85□□□□□ -1.31
CSMD1-203ENST00000518151 PDGFDQ9GZP0 370 aaPredicted RBP6.85□□□□□ -1.31
CSMD1-203ENST00000518151 ARHGEF4Q9NR80 690 aa6.85□□□□□ -1.31
CSMD1-203ENST00000518151 NPEPPSL1A6NEC2 478 aa6.84□□□□□ -1.31
CSMD1-203ENST00000518151 FAM47E-STBD1D6RA91 191 aa6.84□□□□□ -1.31
CSMD1-203ENST00000518151 ZNF20P17024 532 aa6.84□□□□□ -1.31
CSMD1-203ENST00000518151 TUSC3Q13454 348 aa6.84□□□□□ -1.31
CSMD1-203ENST00000518151 DTX3Q8N9I9 347 aa6.84□□□□□ -1.31
CSMD1-203ENST00000518151 MBD6Q96DN6 1003 aa6.84□□□□□ -1.31
CSMD1-203ENST00000518151 ALG1Q9BT22 464 aa6.84□□□□□ -1.31
CSMD1-203ENST00000518151 TMPRSS5Q9H3S3 457 aa6.84□□□□□ -1.31
CSMD1-203ENST00000518151 JADE2Q9NQC1 790 aa6.84□□□□□ -1.31
CSMD1-203ENST00000518151 U2SURPO15042 1029 aaKnown RBP6.83□□□□□ -1.32
CSMD1-203ENST00000518151 FBXO21O94952 628 aa6.83□□□□□ -1.32
CSMD1-203ENST00000518151 FAHP16930 419 aa6.83□□□□□ -1.32
CSMD1-203ENST00000518151 EPHB4P54760 987 aa6.83□□□□□ -1.32
CSMD1-203ENST00000518151 PPP2CBP62714 309 aa6.83□□□□□ -1.32
CSMD1-203ENST00000518151 PPP2CAP67775 309 aa6.83□□□□□ -1.32
CSMD1-203ENST00000518151 GRIN1Q05586 938 aa6.83□□□□□ -1.32
CSMD1-203ENST00000518151 NFATC3Q12968 1075 aa6.83□□□□□ -1.32
CSMD1-203ENST00000518151 LIMS2Q7Z4I7 341 aa6.83□□□□□ -1.32
CSMD1-203ENST00000518151 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.83□□□□□ -1.32
CSMD1-203ENST00000518151 CIR1Q86X95 450 aaPredicted RBP6.83□□□□□ -1.32
CSMD1-203ENST00000518151 CLEC4DQ8WXI8 215 aa6.83□□□□□ -1.32
CSMD1-203ENST00000518151 KISS1RQ969F8 398 aaPredicted RBP6.83□□□□□ -1.32
CSMD1-203ENST00000518151 OSBP2Q969R2 916 aa6.83□□□□□ -1.32
CSMD1-203ENST00000518151 CDK5RAP1Q96SZ6 601 aaKnown RBP6.83□□□□□ -1.32
CSMD1-203ENST00000518151 SSBP3Q9BWW4 388 aaPredicted RBP6.83□□□□□ -1.32
CSMD1-203ENST00000518151 PPARGC1AQ9UBK2 798 aaKnown RBP6.83□□□□□ -1.32
CSMD1-203ENST00000518151 DSEQ9UL01 958 aa6.83□□□□□ -1.32
CSMD1-203ENST00000518151 SOD2P04179 222 aa6.82□□□□□ -1.32
CSMD1-203ENST00000518151 ENO2P09104 434 aaPredicted RBP6.82□□□□□ -1.32
CSMD1-203ENST00000518151 SMAD2Q15796 467 aaKnown RBP6.82□□□□□ -1.32
CSMD1-203ENST00000518151 PAN2Q504Q3 1202 aaKnown RBP6.82□□□□□ -1.32
CSMD1-203ENST00000518151 SLFN13Q68D06 897 aa6.82□□□□□ -1.32
CSMD1-203ENST00000518151 KCNT2Q6UVM3 1135 aa6.82□□□□□ -1.32
CSMD1-203ENST00000518151 CKAP2LQ8IYA6 745 aa6.82□□□□□ -1.32
CSMD1-203ENST00000518151 KCNJ15Q99712 375 aa6.82□□□□□ -1.32
CSMD1-203ENST00000518151 KRTAP3-1Q9BYR8 98 aa6.82□□□□□ -1.32
CSMD1-203ENST00000518151 PPP4R1LQ9P1A2 415 aa6.82□□□□□ -1.32
CSMD1-203ENST00000518151 STK10O94804 968 aaKnown RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms