RNA–Protein interactions for RNA: ENST00000517656.5

CTNNA1-204, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-204ENST00000517656 TCTN1Q2MV58 587 aa9.73□□□□□ -0.85
CTNNA1-204ENST00000517656 CASC1Q6TDU7 716 aa9.73□□□□□ -0.85
CTNNA1-204ENST00000517656 METTL7BQ6UX53 244 aa9.73□□□□□ -0.85
CTNNA1-204ENST00000517656 ADAMTS19Q8TE59 1207 aa9.73□□□□□ -0.85
CTNNA1-204ENST00000517656 PIBF1Q8WXW3 757 aa9.73□□□□□ -0.85
CTNNA1-204ENST00000517656 RRP36Q96EU6 259 aaKnown RBP9.73□□□□□ -0.85
CTNNA1-204ENST00000517656 LZTS2Q9BRK4 669 aa9.73□□□□□ -0.85
CTNNA1-204ENST00000517656 MYL10Q9BUA6 226 aa9.73□□□□□ -0.85
CTNNA1-204ENST00000517656 TUT1Q9H6E5 874 aaKnown RBP9.73□□□□□ -0.85
CTNNA1-204ENST00000517656 BCAS3Q9H6U6 928 aa9.73□□□□□ -0.85
CTNNA1-204ENST00000517656 EMSYQ7Z589 1322 aa9.73□□□□□ -0.85
CTNNA1-204ENST00000517656 TET1Q8NFU7 2136 aa9.73□□□□□ -0.85
CTNNA1-204ENST00000517656 MYO9BQ13459 2157 aa9.73□□□□□ -0.85
CTNNA1-204ENST00000517656 LCHNA4D1U4 455 aa9.72□□□□□ -0.85
CTNNA1-204ENST00000517656 RSPH10B2B2RC85 870 aa9.72□□□□□ -0.85
CTNNA1-204ENST00000517656 NOP56O00567 594 aaKnown RBP9.72□□□□□ -0.85
CTNNA1-204ENST00000517656 SH2B2O14492 632 aaPredicted RBP9.72□□□□□ -0.85
CTNNA1-204ENST00000517656 MEIS2O14770 477 aa9.72□□□□□ -0.85
CTNNA1-204ENST00000517656 LGR5O75473 907 aa9.72□□□□□ -0.85
CTNNA1-204ENST00000517656 RSPH10BP0C881 870 aa9.72□□□□□ -0.85
CTNNA1-204ENST00000517656 SMIM10L2AP0DMW4 78 aa9.72□□□□□ -0.85
CTNNA1-204ENST00000517656 SMIM10L2BP0DMW5 78 aa9.72□□□□□ -0.85
CTNNA1-204ENST00000517656 MCM5P33992 734 aa9.72□□□□□ -0.85
CTNNA1-204ENST00000517656 THPOP40225 353 aa9.72□□□□□ -0.85
CTNNA1-204ENST00000517656 GNAQP50148 359 aa9.72□□□□□ -0.85
CTNNA1-204ENST00000517656 GRB10Q13322 594 aa9.72□□□□□ -0.85
CTNNA1-204ENST00000517656 PCNX4Q63HM2 1172 aa9.72□□□□□ -0.85
CTNNA1-204ENST00000517656 XRRA1Q6P2D8 792 aa9.72□□□□□ -0.85
CTNNA1-204ENST00000517656 CYFIP1Q7L576 1253 aa9.72□□□□□ -0.85
CTNNA1-204ENST00000517656 SPRED2Q7Z698 418 aa9.72□□□□□ -0.85
CTNNA1-204ENST00000517656 TMCO2Q7Z6W1 182 aaPredicted RBP9.72□□□□□ -0.85
CTNNA1-204ENST00000517656 TMTC2Q8N394 836 aa9.72□□□□□ -0.85
CTNNA1-204ENST00000517656 IL27Q8NEV9 243 aa9.72□□□□□ -0.85
CTNNA1-204ENST00000517656 SMARCC2Q8TAQ2 1214 aa9.72□□□□□ -0.85
CTNNA1-204ENST00000517656 CUL5Q93034 780 aa9.72□□□□□ -0.85
CTNNA1-204ENST00000517656 ATP6V0A1Q93050 837 aa9.72□□□□□ -0.85
CTNNA1-204ENST00000517656 TMEM87BQ96K49 555 aa9.72□□□□□ -0.85
CTNNA1-204ENST00000517656 UHRF1Q96T88 793 aaPredicted RBP9.72□□□□□ -0.85
CTNNA1-204ENST00000517656 RAD9AQ99638 391 aa9.72□□□□□ -0.85
CTNNA1-204ENST00000517656 GPR20Q99678 358 aa9.72□□□□□ -0.85
CTNNA1-204ENST00000517656 SENP7Q9BQF6 1050 aa9.72□□□□□ -0.85
CTNNA1-204ENST00000517656 ZBED2Q9BTP6 218 aa9.72□□□□□ -0.85
CTNNA1-204ENST00000517656 USP26Q9BXU7 913 aa9.72□□□□□ -0.85
CTNNA1-204ENST00000517656 LSG1Q9H089 658 aaKnown RBP9.72□□□□□ -0.85
CTNNA1-204ENST00000517656 RTEL1Q9NZ71 1219 aa9.72□□□□□ -0.85
CTNNA1-204ENST00000517656 SEC63Q9UGP8 760 aaKnown RBP9.72□□□□□ -0.85
CTNNA1-204ENST00000517656 CCDC69A6NI79 296 aa9.71□□□□□ -0.86
CTNNA1-204ENST00000517656 TREHO43280 583 aa9.71□□□□□ -0.86
CTNNA1-204ENST00000517656 LPXNO60711 386 aa9.71□□□□□ -0.86
CTNNA1-204ENST00000517656 CAND2O75155 1236 aa9.71□□□□□ -0.86
CTNNA1-204ENST00000517656 PLEKHA8P1O95397 391 aa9.71□□□□□ -0.86
CTNNA1-204ENST00000517656 CALM1P0DP23 149 aa9.71□□□□□ -0.86
CTNNA1-204ENST00000517656 CALM2P0DP24 149 aa9.71□□□□□ -0.86
CTNNA1-204ENST00000517656 CALM3P0DP25 149 aa9.71□□□□□ -0.86
CTNNA1-204ENST00000517656 LIFRP42702 1097 aa9.71□□□□□ -0.86
CTNNA1-204ENST00000517656 TFF2Q03403 129 aa9.71□□□□□ -0.86
CTNNA1-204ENST00000517656 SKIV2LQ15477 1246 aaKnown RBP9.71□□□□□ -0.86
CTNNA1-204ENST00000517656 AAK1Q2M2I8 961 aa9.71□□□□□ -0.86
CTNNA1-204ENST00000517656 PLEKHG4Q58EX7 1191 aa9.71□□□□□ -0.86
CTNNA1-204ENST00000517656 KRT40Q6A162 431 aa9.71□□□□□ -0.86
CTNNA1-204ENST00000517656 USP17L6PQ6QN14 398 aa9.71□□□□□ -0.86
CTNNA1-204ENST00000517656 NFXL1Q6ZNB6 911 aa9.71□□□□□ -0.86
CTNNA1-204ENST00000517656 NLRX1Q86UT6 975 aa9.71□□□□□ -0.86
CTNNA1-204ENST00000517656 SRBD1Q8N5C6 995 aaKnown RBP9.71□□□□□ -0.86
CTNNA1-204ENST00000517656 RNPEPQ9H4A4 650 aa9.71□□□□□ -0.86
CTNNA1-204ENST00000517656 LMCD1Q9NZU5 365 aa9.71□□□□□ -0.86
CTNNA1-204ENST00000517656 ZNF215Q9UL58 517 aaPredicted RBP9.71□□□□□ -0.86
CTNNA1-204ENST00000517656 COG5Q9UP83 839 aa9.71□□□□□ -0.86
CTNNA1-204ENST00000517656 NCOR1O75376 2440 aa9.71□□□□□ -0.86
CTNNA1-204ENST00000517656 PRRC2BQ5JSZ5 2229 aaKnown RBP9.7□□□□□ -0.86
CTNNA1-204ENST00000517656 LINC01553A4QN01 128 aa9.7□□□□□ -0.86
CTNNA1-204ENST00000517656 SLC27A2O14975 620 aa9.7□□□□□ -0.86
CTNNA1-204ENST00000517656 AMHP03971 560 aa9.7□□□□□ -0.86
CTNNA1-204ENST00000517656 GNAT1P11488 350 aa9.7□□□□□ -0.86
CTNNA1-204ENST00000517656 BMP1P13497 986 aa9.7□□□□□ -0.86
CTNNA1-204ENST00000517656 ERVK-21P61565 698 aa9.7□□□□□ -0.86
CTNNA1-204ENST00000517656 COL9A3Q14050 684 aaPredicted RBP9.7□□□□□ -0.86
CTNNA1-204ENST00000517656 NECTIN1Q15223 517 aa9.7□□□□□ -0.86
CTNNA1-204ENST00000517656 CREB3L3Q68CJ9 461 aa9.7□□□□□ -0.86
CTNNA1-204ENST00000517656 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.7□□□□□ -0.86
CTNNA1-204ENST00000517656 TRIM50Q86XT4 487 aa9.7□□□□□ -0.86
CTNNA1-204ENST00000517656 GIMAP8Q8ND71 665 aaPredicted RBP9.7□□□□□ -0.86
CTNNA1-204ENST00000517656 DBF4BQ8NFT6 615 aa9.7□□□□□ -0.86
CTNNA1-204ENST00000517656 GPRASP2Q96D09 838 aa9.7□□□□□ -0.86
CTNNA1-204ENST00000517656 CDHR1Q96JP9 859 aa9.7□□□□□ -0.86
CTNNA1-204ENST00000517656 TGS1Q96RS0 853 aaKnown RBP9.7□□□□□ -0.86
CTNNA1-204ENST00000517656 ESYT1Q9BSJ8 1104 aa9.7□□□□□ -0.86
CTNNA1-204ENST00000517656 TELO2Q9Y4R8 837 aa9.7□□□□□ -0.86
CTNNA1-204ENST00000517656 PTPRSQ13332 1948 aa9.7□□□□□ -0.86
CTNNA1-204ENST00000517656 TRIP12Q14669 1992 aaPredicted RBP9.7□□□□□ -0.86
CTNNA1-204ENST00000517656 BAZ2BQ9UIF8 2168 aaKnown RBP9.7□□□□□ -0.86
CTNNA1-204ENST00000517656 KCNA2P16389 499 aa9.69□□□□□ -0.86
CTNNA1-204ENST00000517656 RXRAP19793 462 aa9.69□□□□□ -0.86
CTNNA1-204ENST00000517656 ADAM17P78536 824 aa9.69□□□□□ -0.86
CTNNA1-204ENST00000517656 HTRA4P83105 476 aaPredicted RBP9.69□□□□□ -0.86
CTNNA1-204ENST00000517656 UTP14CQ5TAP6 766 aaKnown RBP9.69□□□□□ -0.86
CTNNA1-204ENST00000517656 FAM117BQ6P1L5 589 aa9.69□□□□□ -0.86
CTNNA1-204ENST00000517656 TMTC3Q6ZXV5 915 aa9.69□□□□□ -0.86
CTNNA1-204ENST00000517656 SGMS1Q86VZ5 419 aa9.69□□□□□ -0.86
CTNNA1-204ENST00000517656 MYOCDQ8IZQ8 938 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms