RNA–Protein interactions for RNA: ENST00000517545.5

PCM1-203, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 3,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-203ENST00000517545 LARP4BQ92615 738 aaKnown RBP13.6□□□□□ -0.23
PCM1-203ENST00000517545 ISCUQ9H1K1 167 aa13.6□□□□□ -0.23
PCM1-203ENST00000517545 CEP72Q9P209 647 aa13.6□□□□□ -0.23
PCM1-203ENST00000517545 ATP6V0A2Q9Y487 856 aa13.6□□□□□ -0.23
PCM1-203ENST00000517545 COL22A1Q8NFW1 1626 aaPredicted RBP13.59□□□□□ -0.23
PCM1-203ENST00000517545 MYH1P12882 1939 aa13.59□□□□□ -0.23
PCM1-203ENST00000517545 SMCO2A6NFE2 343 aa13.59□□□□□ -0.23
PCM1-203ENST00000517545 POTEMA6NI47 508 aa13.59□□□□□ -0.23
PCM1-203ENST00000517545 CTNNA1P35221 906 aaKnown RBP13.59□□□□□ -0.23
PCM1-203ENST00000517545 PSEN1P49768 467 aa13.59□□□□□ -0.23
PCM1-203ENST00000517545 TNNC1P63316 161 aa13.59□□□□□ -0.23
PCM1-203ENST00000517545 SLC18A3Q16572 532 aa13.59□□□□□ -0.23
PCM1-203ENST00000517545 FAM228AQ86W67 206 aa13.59□□□□□ -0.23
PCM1-203ENST00000517545 ZMYND12Q9H0C1 365 aa13.59□□□□□ -0.23
PCM1-203ENST00000517545 HAUS2Q9NVX0 235 aa13.59□□□□□ -0.23
PCM1-203ENST00000517545 TMEM260Q9NX78 707 aa13.59□□□□□ -0.23
PCM1-203ENST00000517545 TFCP2L1Q9NZI6 479 aa13.59□□□□□ -0.23
PCM1-203ENST00000517545 TMEM59LQ9UK28 342 aa13.59□□□□□ -0.23
PCM1-203ENST00000517545 TRAPPC3O43617 180 aa13.59□□□□□ -0.23
PCM1-203ENST00000517545 LRRC63Q05C16 580 aa13.59□□□□□ -0.23
PCM1-203ENST00000517545 UBE4AQ14139 1066 aa13.59□□□□□ -0.23
PCM1-203ENST00000517545 GALNT17Q6IS24 598 aa13.59□□□□□ -0.23
PCM1-203ENST00000517545 DDX12PQ92771 950 aa13.59□□□□□ -0.23
PCM1-203ENST00000517545 FGFBP2Q9BYJ0 223 aa13.59□□□□□ -0.23
PCM1-203ENST00000517545 BIN2Q9UBW5 565 aaPredicted RBP13.59□□□□□ -0.23
PCM1-203ENST00000517545 MCM8Q9UJA3 840 aa13.59□□□□□ -0.23
PCM1-203ENST00000517545 SUFUQ9UMX1 484 aa13.59□□□□□ -0.23
PCM1-203ENST00000517545 LEMD3Q9Y2U8 911 aa13.59□□□□□ -0.23
PCM1-203ENST00000517545 A0A0G2JS52 829 aa13.58□□□□□ -0.23
PCM1-203ENST00000517545 CAMTA2O94983 1202 aa13.58□□□□□ -0.23
PCM1-203ENST00000517545 FGFR1OPO95684 399 aaKnown RBP13.58□□□□□ -0.23
PCM1-203ENST00000517545 BYSLQ13895 437 aaKnown RBP13.58□□□□□ -0.23
PCM1-203ENST00000517545 PLCB4Q15147 1175 aa13.58□□□□□ -0.23
PCM1-203ENST00000517545 PREPLQ4J6C6 727 aaPredicted RBP13.58□□□□□ -0.23
PCM1-203ENST00000517545 CHADLQ6NUI6 762 aa13.58□□□□□ -0.23
PCM1-203ENST00000517545 INTS5Q6P9B9 1019 aaKnown RBP13.58□□□□□ -0.23
PCM1-203ENST00000517545 CEP57Q86XR8 500 aa13.58□□□□□ -0.23
PCM1-203ENST00000517545 MINPP1Q9UNW1 487 aa13.58□□□□□ -0.23
PCM1-203ENST00000517545 ABCB11O95342 1321 aa13.58□□□□□ -0.23
PCM1-203ENST00000517545 GOLGA6L7A0A1B0GV03 622 aa13.58□□□□□ -0.24
PCM1-203ENST00000517545 TRAF5O00463 557 aa13.58□□□□□ -0.24
PCM1-203ENST00000517545 SBK1Q52WX2 424 aa13.58□□□□□ -0.24
PCM1-203ENST00000517545 ODF2Q5BJF6 829 aa13.58□□□□□ -0.24
PCM1-203ENST00000517545 CYB5D1Q6P9G0 228 aa13.58□□□□□ -0.24
PCM1-203ENST00000517545 KRT25Q7Z3Z0 450 aa13.58□□□□□ -0.24
PCM1-203ENST00000517545 GIMAP7Q8NHV1 300 aa13.58□□□□□ -0.24
PCM1-203ENST00000517545 DDX47Q9H0S4 455 aaKnown RBP13.58□□□□□ -0.24
PCM1-203ENST00000517545 VAT1LQ9HCJ6 419 aa13.58□□□□□ -0.24
PCM1-203ENST00000517545 TBC1D7Q9P0N9 293 aa13.58□□□□□ -0.24
PCM1-203ENST00000517545 GGA2Q9UJY4 613 aa13.58□□□□□ -0.24
PCM1-203ENST00000517545 FBXL5Q9UKA1 691 aa13.58□□□□□ -0.24
PCM1-203ENST00000517545 RREB1Q92766 1687 aa13.58□□□□□ -0.24
PCM1-203ENST00000517545 PVALEFA0A1B0GWK0 134 aa13.58□□□□□ -0.24
PCM1-203ENST00000517545 KLRF2D3W0D1 207 aa13.58□□□□□ -0.24
PCM1-203ENST00000517545 OPLAHO14841 1288 aa13.58□□□□□ -0.24
PCM1-203ENST00000517545 CEP104O60308 925 aa13.58□□□□□ -0.24
PCM1-203ENST00000517545 CLSTN1O94985 981 aa13.58□□□□□ -0.24
PCM1-203ENST00000517545 GNAQP50148 359 aa13.58□□□□□ -0.24
PCM1-203ENST00000517545 FUKQ8N0W3 1084 aa13.58□□□□□ -0.24
PCM1-203ENST00000517545 UBLCP1Q8WVY7 318 aaPredicted RBP13.58□□□□□ -0.24
PCM1-203ENST00000517545 ANKS1AQ92625 1134 aa13.58□□□□□ -0.24
PCM1-203ENST00000517545 SEC16BQ96JE7 1060 aa13.58□□□□□ -0.24
PCM1-203ENST00000517545 TMEM47Q9BQJ4 181 aa13.58□□□□□ -0.24
PCM1-203ENST00000517545 EDEM3Q9BZQ6 932 aa13.58□□□□□ -0.24
PCM1-203ENST00000517545 MKNK2Q9HBH9 465 aa13.58□□□□□ -0.24
PCM1-203ENST00000517545 NOVA2Q9UNW9 492 aaKnown RBP13.58□□□□□ -0.24
PCM1-203ENST00000517545 COL4A3BPQ9Y5P4 624 aa13.58□□□□□ -0.24
PCM1-203ENST00000517545 CASZ1Q86V15 1759 aa13.58□□□□□ -0.24
PCM1-203ENST00000517545 PALM3A6NDB9 673 aaPredicted RBP13.57□□□□□ -0.24
PCM1-203ENST00000517545 SLC37A4O43826 429 aa13.57□□□□□ -0.24
PCM1-203ENST00000517545 MMP14P50281 582 aa13.57□□□□□ -0.24
PCM1-203ENST00000517545 CDR1P51861 262 aa13.57□□□□□ -0.24
PCM1-203ENST00000517545 KLHL30Q0D2K2 578 aa13.57□□□□□ -0.24
PCM1-203ENST00000517545 SF3A3Q12874 501 aaKnown RBP eCLIP13.57□□□□□ -0.24
PCM1-203ENST00000517545 NEDD9Q14511 834 aa13.57□□□□□ -0.24
PCM1-203ENST00000517545 RPS6KA1Q15418 735 aa13.57□□□□□ -0.24
PCM1-203ENST00000517545 ANKRD20A8PQ5CZ79 823 aa13.57□□□□□ -0.24
PCM1-203ENST00000517545 LRIG3Q6UXM1 1119 aa13.57□□□□□ -0.24
PCM1-203ENST00000517545 ARFGAP2Q8N6H7 521 aa13.57□□□□□ -0.24
PCM1-203ENST00000517545 RAPGEF5Q92565 580 aa13.57□□□□□ -0.24
PCM1-203ENST00000517545 TAF4BQ92750 862 aa13.57□□□□□ -0.24
PCM1-203ENST00000517545 CDK5RAP3Q96JB5 506 aa13.57□□□□□ -0.24
PCM1-203ENST00000517545 DONSONQ9NYP3 566 aa13.57□□□□□ -0.24
PCM1-203ENST00000517545 PHF20L1A8MW92 1017 aa13.57□□□□□ -0.24
PCM1-203ENST00000517545 TSPY3P0CV98 308 aa13.57□□□□□ -0.24
PCM1-203ENST00000517545 TSPY8P0CW00 308 aa13.57□□□□□ -0.24
PCM1-203ENST00000517545 PARP9Q8IXQ6 854 aa13.57□□□□□ -0.24
PCM1-203ENST00000517545 CEP83Q9Y592 693 aa13.57□□□□□ -0.24
PCM1-203ENST00000517545 TAF1P21675 1872 aa13.57□□□□□ -0.24
PCM1-203ENST00000517545 ITGB4P16144 1822 aa13.57□□□□□ -0.24
PCM1-203ENST00000517545 SART1O43290 800 aaKnown RBP13.57□□□□□ -0.24
PCM1-203ENST00000517545 CHRM1P11229 460 aaPredicted RBP13.57□□□□□ -0.24
PCM1-203ENST00000517545 ITGA4P13612 1032 aa13.57□□□□□ -0.24
PCM1-203ENST00000517545 SCP2P22307 547 aa13.57□□□□□ -0.24
PCM1-203ENST00000517545 C12orf60Q5U649 245 aa13.57□□□□□ -0.24
PCM1-203ENST00000517545 NELFCDQ8IXH7 590 aa13.57□□□□□ -0.24
PCM1-203ENST00000517545 N4BP2L2Q92802 583 aaPredicted RBP13.57□□□□□ -0.24
PCM1-203ENST00000517545 CELF1Q92879 486 aaKnown RBP13.57□□□□□ -0.24
PCM1-203ENST00000517545 GJA10Q969M2 543 aa13.57□□□□□ -0.24
PCM1-203ENST00000517545 SCLT1Q96NL6 688 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms