RNA–Protein interactions for RNA: ENST00000517484.5

EFCAB13-203, Transcript of EF-hand calcium binding domain 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene EFCAB13, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-203ENST00000517484 KIFC3Q9BVG8 833 aa10.86□□□□□ -0.67
EFCAB13-203ENST00000517484 RANBP17Q9H2T7 1088 aaKnown RBP10.86□□□□□ -0.67
EFCAB13-203ENST00000517484 UNC45AQ9H3U1 944 aa10.86□□□□□ -0.67
EFCAB13-203ENST00000517484 ZNF536O15090 1300 aa10.85□□□□□ -0.67
EFCAB13-203ENST00000517484 NMT1P30419 496 aaKnown RBP10.85□□□□□ -0.67
EFCAB13-203ENST00000517484 DSG3P32926 999 aa10.85□□□□□ -0.67
EFCAB13-203ENST00000517484 CYP2J2P51589 502 aa10.85□□□□□ -0.67
EFCAB13-203ENST00000517484 USP11P51784 963 aa10.85□□□□□ -0.67
EFCAB13-203ENST00000517484 HERVK_113P62684 666 aa10.85□□□□□ -0.67
EFCAB13-203ENST00000517484 MTERF2Q49AM1 385 aa10.85□□□□□ -0.67
EFCAB13-203ENST00000517484 ZBTB10Q96DT7 871 aa10.85□□□□□ -0.67
EFCAB13-203ENST00000517484 GSDMAQ96QA5 445 aa10.85□□□□□ -0.67
EFCAB13-203ENST00000517484 MTMR9Q96QG7 549 aa10.85□□□□□ -0.67
EFCAB13-203ENST00000517484 FGFBP2Q9BYJ0 223 aa10.85□□□□□ -0.67
EFCAB13-203ENST00000517484 ACAD9Q9H845 621 aa10.85□□□□□ -0.67
EFCAB13-203ENST00000517484 GBA2Q9HCG7 927 aaPredicted RBP10.85□□□□□ -0.67
EFCAB13-203ENST00000517484 TXNRD2Q9NNW7 524 aa10.85□□□□□ -0.67
EFCAB13-203ENST00000517484 RMND1Q9NWS8 449 aa10.85□□□□□ -0.67
EFCAB13-203ENST00000517484 NOP56O00567 594 aaKnown RBP10.85□□□□□ -0.67
EFCAB13-203ENST00000517484 NRDCO43847 1150 aa10.85□□□□□ -0.67
EFCAB13-203ENST00000517484 CDR1P51861 262 aa10.85□□□□□ -0.67
EFCAB13-203ENST00000517484 MDM2Q00987 491 aaPredicted RBP10.85□□□□□ -0.67
EFCAB13-203ENST00000517484 PDE4CQ08493 712 aa10.85□□□□□ -0.67
EFCAB13-203ENST00000517484 FAM26FQ5R3K3 315 aa10.85□□□□□ -0.67
EFCAB13-203ENST00000517484 SFR1Q86XK3 245 aa10.85□□□□□ -0.67
EFCAB13-203ENST00000517484 CCDC155Q8N6L0 562 aa10.85□□□□□ -0.67
EFCAB13-203ENST00000517484 ELMO3Q96BJ8 720 aa10.85□□□□□ -0.67
EFCAB13-203ENST00000517484 FAM207AQ9NSI2 230 aaPredicted RBP10.85□□□□□ -0.67
EFCAB13-203ENST00000517484 AFG3L2Q9Y4W6 797 aa10.85□□□□□ -0.67
EFCAB13-203ENST00000517484 ZNF831Q5JPB2 1677 aa10.85□□□□□ -0.67
EFCAB13-203ENST00000517484 LTBP3Q9NS15 1303 aa10.85□□□□□ -0.67
EFCAB13-203ENST00000517484 C19orf81C9J6K1 198 aa10.85□□□□□ -0.67
EFCAB13-203ENST00000517484 GCFC2P16383 781 aaKnown RBP10.85□□□□□ -0.67
EFCAB13-203ENST00000517484 SREBF1P36956 1147 aa10.85□□□□□ -0.67
EFCAB13-203ENST00000517484 HTRA3P83110 453 aa10.85□□□□□ -0.67
EFCAB13-203ENST00000517484 KCNA1Q09470 495 aa10.85□□□□□ -0.67
EFCAB13-203ENST00000517484 ODR4Q5SWX8 454 aa10.85□□□□□ -0.67
EFCAB13-203ENST00000517484 TRIM50Q86XT4 487 aa10.85□□□□□ -0.67
EFCAB13-203ENST00000517484 RAD54LQ92698 747 aa10.85□□□□□ -0.67
EFCAB13-203ENST00000517484 FAM212AQ96EL1 285 aa10.85□□□□□ -0.67
EFCAB13-203ENST00000517484 PORCNQ9H237 461 aa10.85□□□□□ -0.67
EFCAB13-203ENST00000517484 BLOC1S4Q9NUP1 217 aa10.85□□□□□ -0.67
EFCAB13-203ENST00000517484 GABBR1Q9UBS5 961 aa10.85□□□□□ -0.67
EFCAB13-203ENST00000517484 TUBE1Q9UJT0 475 aa10.85□□□□□ -0.67
EFCAB13-203ENST00000517484 B4DLN1 442 aa10.84□□□□□ -0.67
EFCAB13-203ENST00000517484 DNA2P51530 1060 aa10.84□□□□□ -0.67
EFCAB13-203ENST00000517484 E2F4Q16254 413 aa10.84□□□□□ -0.67
EFCAB13-203ENST00000517484 PPP1R18Q6NYC8 613 aa10.84□□□□□ -0.67
EFCAB13-203ENST00000517484 CATSPERGQ6ZRH7 1159 aa10.84□□□□□ -0.67
EFCAB13-203ENST00000517484 PNMA8AQ86V59 439 aaPredicted RBP10.84□□□□□ -0.67
EFCAB13-203ENST00000517484 CCDC65Q8IXS2 484 aa10.84□□□□□ -0.67
EFCAB13-203ENST00000517484 COPS5Q92905 334 aa10.84□□□□□ -0.67
EFCAB13-203ENST00000517484 SCLT1Q96NL6 688 aa10.84□□□□□ -0.67
EFCAB13-203ENST00000517484 PDCD2LQ9BRP1 358 aa10.84□□□□□ -0.67
EFCAB13-203ENST00000517484 DESI2Q9BSY9 194 aa10.84□□□□□ -0.67
EFCAB13-203ENST00000517484 RUSC1Q9BVN2 902 aa10.84□□□□□ -0.67
EFCAB13-203ENST00000517484 GPBP1L1Q9HC44 474 aaPredicted RBP10.84□□□□□ -0.67
EFCAB13-203ENST00000517484 SEPT9Q9UHD8 586 aaPredicted RBP10.84□□□□□ -0.67
EFCAB13-203ENST00000517484 PGAP2Q9UHJ9 254 aa10.84□□□□□ -0.67
EFCAB13-203ENST00000517484 ZHX1Q9UKY1 873 aaPredicted RBP10.84□□□□□ -0.67
EFCAB13-203ENST00000517484 PLIN4Q96Q06 1357 aa10.84□□□□□ -0.67
EFCAB13-203ENST00000517484 LAD1O00515 517 aa10.84□□□□□ -0.67
EFCAB13-203ENST00000517484 MRPS9P82933 396 aaKnown RBP10.84□□□□□ -0.67
EFCAB13-203ENST00000517484 LY6KQ17RY6 165 aa10.84□□□□□ -0.67
EFCAB13-203ENST00000517484 TKFCQ3LXA3 575 aa10.84□□□□□ -0.67
EFCAB13-203ENST00000517484 ANKRD40Q6AI12 368 aa10.84□□□□□ -0.67
EFCAB13-203ENST00000517484 PPP4R3AQ6IN85 833 aa10.84□□□□□ -0.67
EFCAB13-203ENST00000517484 FBXO16Q8IX29 292 aaPredicted RBP10.84□□□□□ -0.67
EFCAB13-203ENST00000517484 CCAR2Q8N163 923 aaKnown RBP10.84□□□□□ -0.67
EFCAB13-203ENST00000517484 NSUN6Q8TEA1 469 aaKnown RBP10.84□□□□□ -0.67
EFCAB13-203ENST00000517484 CLEC4DQ8WXI8 215 aa10.84□□□□□ -0.67
EFCAB13-203ENST00000517484 AK8Q96MA6 479 aa10.84□□□□□ -0.67
EFCAB13-203ENST00000517484 CSDE1O75534 798 aaKnown RBP10.83□□□□□ -0.67
EFCAB13-203ENST00000517484 TPM2P07951 284 aa10.83□□□□□ -0.67
EFCAB13-203ENST00000517484 TRIM21P19474 475 aaKnown RBP10.83□□□□□ -0.67
EFCAB13-203ENST00000517484 TBC1D8BQ0IIM8 1120 aa10.83□□□□□ -0.67
EFCAB13-203ENST00000517484 TMEM63BQ5T3F8 832 aa10.83□□□□□ -0.67
EFCAB13-203ENST00000517484 BTNL9Q6UXG8 535 aa10.83□□□□□ -0.67
EFCAB13-203ENST00000517484 USP50Q70EL3 339 aaPredicted RBP10.83□□□□□ -0.67
EFCAB13-203ENST00000517484 METTL13Q8N6R0 699 aa10.83□□□□□ -0.67
EFCAB13-203ENST00000517484 BICD1Q96G01 975 aa10.83□□□□□ -0.67
EFCAB13-203ENST00000517484 CEP170P1Q96L14 293 aa10.83□□□□□ -0.67
EFCAB13-203ENST00000517484 MXRA8Q9BRK3 442 aa10.83□□□□□ -0.67
EFCAB13-203ENST00000517484 CCSER1Q9C0I3 900 aa10.83□□□□□ -0.67
EFCAB13-203ENST00000517484 NLRC4Q9NPP4 1024 aa10.83□□□□□ -0.67
EFCAB13-203ENST00000517484 GOLGA8IPA6NC78 632 aa10.83□□□□□ -0.68
EFCAB13-203ENST00000517484 GOLGA8JA6NMD2 632 aa10.83□□□□□ -0.68
EFCAB13-203ENST00000517484 KCNJ18B7U540 433 aa10.83□□□□□ -0.68
EFCAB13-203ENST00000517484 PDHXO00330 501 aa10.83□□□□□ -0.68
EFCAB13-203ENST00000517484 CNGA1P29973 690 aa10.83□□□□□ -0.68
EFCAB13-203ENST00000517484 NOVP48745 357 aa10.83□□□□□ -0.68
EFCAB13-203ENST00000517484 KCNJ12Q14500 433 aa10.83□□□□□ -0.68
EFCAB13-203ENST00000517484 PRAMEF19Q5SWL8 479 aa10.83□□□□□ -0.68
EFCAB13-203ENST00000517484 IGSF22Q8N9C0 903 aa10.83□□□□□ -0.68
EFCAB13-203ENST00000517484 MTMR8Q96EF0 704 aa10.83□□□□□ -0.68
EFCAB13-203ENST00000517484 NOC4LQ9BVI4 516 aaKnown RBP10.83□□□□□ -0.68
EFCAB13-203ENST00000517484 MOV10L1Q9BXT6 1211 aaKnown RBP10.83□□□□□ -0.68
EFCAB13-203ENST00000517484 SPATC1LQ9H0A9 340 aa10.83□□□□□ -0.68
EFCAB13-203ENST00000517484 NKRFO15226 690 aaKnown RBP eCLIP10.83□□□□□ -0.68
EFCAB13-203ENST00000517484 NCAPHQ15003 741 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms