RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 STK24Q9Y6E0 443 aa11.85□□□□□ -0.51
PCDHGA1-202ENST00000517417 FAM237AA0A1B0GTK4 181 aa11.84□□□□□ -0.51
PCDHGA1-202ENST00000517417 MAP2K7O14733 419 aa11.84□□□□□ -0.51
PCDHGA1-202ENST00000517417 DLATP10515 647 aaKnown RBP11.84□□□□□ -0.51
PCDHGA1-202ENST00000517417 CACNB3P54284 484 aa11.84□□□□□ -0.51
PCDHGA1-202ENST00000517417 LRRC45Q96CN5 670 aa11.84□□□□□ -0.51
PCDHGA1-202ENST00000517417 HSD3B7Q9H2F3 369 aa11.84□□□□□ -0.51
PCDHGA1-202ENST00000517417 BSDC1Q9NW68 430 aaPredicted RBP11.84□□□□□ -0.51
PCDHGA1-202ENST00000517417 CCPG1Q9ULG6 757 aa11.84□□□□□ -0.51
PCDHGA1-202ENST00000517417 NOD1Q9Y239 953 aa11.84□□□□□ -0.51
PCDHGA1-202ENST00000517417 CDHR2Q9BYE9 1310 aa11.84□□□□□ -0.51
PCDHGA1-202ENST00000517417 KCNK3O14649 394 aa11.84□□□□□ -0.51
PCDHGA1-202ENST00000517417 CSF1RP07333 972 aa11.84□□□□□ -0.51
PCDHGA1-202ENST00000517417 EAPPQ56P03 285 aaPredicted RBP11.84□□□□□ -0.51
PCDHGA1-202ENST00000517417 ODR4Q5SWX8 454 aa11.84□□□□□ -0.51
PCDHGA1-202ENST00000517417 NT5DC1Q5TFE4 455 aa11.84□□□□□ -0.51
PCDHGA1-202ENST00000517417 LARP4BQ92615 738 aaKnown RBP11.84□□□□□ -0.51
PCDHGA1-202ENST00000517417 CABS1Q96KC9 395 aa11.84□□□□□ -0.51
PCDHGA1-202ENST00000517417 MTA3Q9BTC8 594 aa11.84□□□□□ -0.51
PCDHGA1-202ENST00000517417 STIM2Q9P246 746 aa11.84□□□□□ -0.51
PCDHGA1-202ENST00000517417 CAPN11Q9UMQ6 739 aa11.84□□□□□ -0.51
PCDHGA1-202ENST00000517417 PLCG1P19174 1290 aa11.84□□□□□ -0.51
PCDHGA1-202ENST00000517417 CDKAL1Q5VV42 579 aa11.84□□□□□ -0.51
PCDHGA1-202ENST00000517417 SMIM5Q71RC9 77 aa11.84□□□□□ -0.51
PCDHGA1-202ENST00000517417 SLFN12Q8IYM2 578 aa11.84□□□□□ -0.51
PCDHGA1-202ENST00000517417 PPM1KQ8N3J5 372 aa11.84□□□□□ -0.51
PCDHGA1-202ENST00000517417 METTL13Q8N6R0 699 aa11.84□□□□□ -0.51
PCDHGA1-202ENST00000517417 CELF1Q92879 486 aaKnown RBP11.84□□□□□ -0.51
PCDHGA1-202ENST00000517417 PLA2G12BQ9BX93 195 aa11.84□□□□□ -0.51
PCDHGA1-202ENST00000517417 NUCKS1Q9H1E3 243 aaKnown RBP11.84□□□□□ -0.51
PCDHGA1-202ENST00000517417 COL4A3BPQ9Y5P4 624 aa11.84□□□□□ -0.51
PCDHGA1-202ENST00000517417 PP2D1A8MPX8 630 aa11.83□□□□□ -0.51
PCDHGA1-202ENST00000517417 K7ENM7 598 aa11.83□□□□□ -0.51
PCDHGA1-202ENST00000517417 MEIS1O00470 390 aa11.83□□□□□ -0.51
PCDHGA1-202ENST00000517417 PSMD14O00487 310 aa11.83□□□□□ -0.51
PCDHGA1-202ENST00000517417 PPM1FP49593 454 aaPredicted RBP11.83□□□□□ -0.51
PCDHGA1-202ENST00000517417 TRIM28Q13263 835 aaKnown RBP11.83□□□□□ -0.51
PCDHGA1-202ENST00000517417 FOXR1Q6PIV2 292 aa11.83□□□□□ -0.51
PCDHGA1-202ENST00000517417 PPP1R21Q6ZMI0 780 aa11.83□□□□□ -0.51
PCDHGA1-202ENST00000517417 ANKRD35Q8N283 1001 aa11.83□□□□□ -0.51
PCDHGA1-202ENST00000517417 DEPTORQ8TB45 409 aa11.83□□□□□ -0.51
PCDHGA1-202ENST00000517417 MST1RQ04912 1400 aa11.83□□□□□ -0.51
PCDHGA1-202ENST00000517417 A0A1W2PQC6 194 aa11.83□□□□□ -0.52
PCDHGA1-202ENST00000517417 GNA14O95837 355 aa11.83□□□□□ -0.52
PCDHGA1-202ENST00000517417 EHHADHQ08426 723 aa11.83□□□□□ -0.52
PCDHGA1-202ENST00000517417 RASA3Q14644 834 aa11.83□□□□□ -0.52
PCDHGA1-202ENST00000517417 ALS2CLQ60I27 953 aa11.83□□□□□ -0.52
PCDHGA1-202ENST00000517417 NFRKBQ6P4R8 1299 aa11.83□□□□□ -0.52
PCDHGA1-202ENST00000517417 EMBQ6PCB8 327 aa11.83□□□□□ -0.52
PCDHGA1-202ENST00000517417 SPATS2Q86XZ4 545 aaKnown RBP11.83□□□□□ -0.52
PCDHGA1-202ENST00000517417 HOOK2Q96ED9 719 aa11.83□□□□□ -0.52
PCDHGA1-202ENST00000517417 FAM217BQ9NTX9 383 aaPredicted RBP11.83□□□□□ -0.52
PCDHGA1-202ENST00000517417 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.83□□□□□ -0.52
PCDHGA1-202ENST00000517417 FAM53CQ9NYF3 392 aa11.83□□□□□ -0.52
PCDHGA1-202ENST00000517417 KCNQ2O43526 872 aa11.83□□□□□ -0.52
PCDHGA1-202ENST00000517417 NMT2O60551 498 aa11.83□□□□□ -0.52
PCDHGA1-202ENST00000517417 MYL1P05976 194 aa11.83□□□□□ -0.52
PCDHGA1-202ENST00000517417 ATP2A2P16615 1042 aaKnown RBP11.83□□□□□ -0.52
PCDHGA1-202ENST00000517417 RUFY4Q6ZNE9 571 aa11.83□□□□□ -0.52
PCDHGA1-202ENST00000517417 OTUD6AQ7L8S5 288 aa11.83□□□□□ -0.52
PCDHGA1-202ENST00000517417 APBA1Q02410 837 aa11.83□□□□□ -0.52
PCDHGA1-202ENST00000517417 C6orf163Q5TEZ5 329 aa11.83□□□□□ -0.52
PCDHGA1-202ENST00000517417 WDR93Q6P2C0 686 aa11.83□□□□□ -0.52
PCDHGA1-202ENST00000517417 MIGA2Q7L4E1 593 aa11.83□□□□□ -0.52
PCDHGA1-202ENST00000517417 KRT26Q7Z3Y9 468 aa11.83□□□□□ -0.52
PCDHGA1-202ENST00000517417 ZNF512BQ96KM6 892 aaPredicted RBP11.83□□□□□ -0.52
PCDHGA1-202ENST00000517417 CUEDC2Q9H467 287 aa11.83□□□□□ -0.52
PCDHGA1-202ENST00000517417 NKIRAS1Q9NYS0 192 aa11.83□□□□□ -0.52
PCDHGA1-202ENST00000517417 SAMD15Q9P1V8 674 aa11.83□□□□□ -0.52
PCDHGA1-202ENST00000517417 NFU1Q9UMS0 254 aa11.83□□□□□ -0.52
PCDHGA1-202ENST00000517417 CSADQ9Y600 493 aa11.83□□□□□ -0.52
PCDHGA1-202ENST00000517417 CTNNA1P35221 906 aaKnown RBP11.82□□□□□ -0.52
PCDHGA1-202ENST00000517417 VPS41P49754 854 aa11.82□□□□□ -0.52
PCDHGA1-202ENST00000517417 UBE2SQ16763 222 aa11.82□□□□□ -0.52
PCDHGA1-202ENST00000517417 GNPTABQ3T906 1256 aa11.82□□□□□ -0.52
PCDHGA1-202ENST00000517417 ASPRV1Q53RT3 343 aa11.82□□□□□ -0.52
PCDHGA1-202ENST00000517417 LRCH2Q5VUJ6 765 aa11.82□□□□□ -0.52
PCDHGA1-202ENST00000517417 MCTP2Q6DN12 878 aa11.82□□□□□ -0.52
PCDHGA1-202ENST00000517417 CCNI2Q6ZMN8 369 aaPredicted RBP11.82□□□□□ -0.52
PCDHGA1-202ENST00000517417 PROCA1Q8NCQ7 364 aaPredicted RBP11.82□□□□□ -0.52
PCDHGA1-202ENST00000517417 SLC44A5Q8NCS7 719 aa11.82□□□□□ -0.52
PCDHGA1-202ENST00000517417 KANSL2Q9H9L4 492 aa11.82□□□□□ -0.52
PCDHGA1-202ENST00000517417 MAGEF1Q9HAY2 307 aa11.82□□□□□ -0.52
PCDHGA1-202ENST00000517417 AGPAT5Q9NUQ2 364 aa11.82□□□□□ -0.52
PCDHGA1-202ENST00000517417 MINPP1Q9UNW1 487 aa11.82□□□□□ -0.52
PCDHGA1-202ENST00000517417 RABGAP1Q9Y3P9 1069 aa11.82□□□□□ -0.52
PCDHGA1-202ENST00000517417 FTCDO95954 541 aa11.82□□□□□ -0.52
PCDHGA1-202ENST00000517417 CORO7P57737 925 aa11.82□□□□□ -0.52
PCDHGA1-202ENST00000517417 IFT88Q13099 833 aa11.82□□□□□ -0.52
PCDHGA1-202ENST00000517417 TRAPPC11Q7Z392 1133 aa11.82□□□□□ -0.52
PCDHGA1-202ENST00000517417 LRRC1Q9BTT6 524 aa11.82□□□□□ -0.52
PCDHGA1-202ENST00000517417 NCK2O43639 380 aa11.82□□□□□ -0.52
PCDHGA1-202ENST00000517417 IFNB1P01574 187 aa11.82□□□□□ -0.52
PCDHGA1-202ENST00000517417 FERP16591 822 aa11.82□□□□□ -0.52
PCDHGA1-202ENST00000517417 NR2F2P24468 414 aa11.82□□□□□ -0.52
PCDHGA1-202ENST00000517417 SLC8A3P57103 927 aa11.82□□□□□ -0.52
PCDHGA1-202ENST00000517417 MAN2A1Q16706 1144 aa11.82□□□□□ -0.52
PCDHGA1-202ENST00000517417 CC2D2BQ6DHV5 1058 aa11.82□□□□□ -0.52
PCDHGA1-202ENST00000517417 NBPF3Q9H094 633 aa11.82□□□□□ -0.52
PCDHGA1-202ENST00000517417 TULP2O00295 520 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms