RNA–Protein interactions for RNA: ENST00000517026.1

SCARNA21-201, small Cajal body-specific RNA 21, humanhuman

BASIC

Gene SCARNA21, Length 139 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA21-201ENST00000517026 CDHR1Q96JP9 859 aa16.6■□□□□ 0.25
SCARNA21-201ENST00000517026 SENP7Q9BQF6 1050 aa16.6■□□□□ 0.25
SCARNA21-201ENST00000517026 HTATIP2Q9BUP3 242 aa16.6■□□□□ 0.25
SCARNA21-201ENST00000517026 AGO4Q9HCK5 861 aaKnown RBP16.6■□□□□ 0.25
SCARNA21-201ENST00000517026 STARD7Q9NQZ5 370 aa16.6■□□□□ 0.25
SCARNA21-201ENST00000517026 USP11P51784 963 aa16.59■□□□□ 0.25
SCARNA21-201ENST00000517026 PURAQ00577 322 aaKnown RBP16.59■□□□□ 0.25
SCARNA21-201ENST00000517026 ITGB3BPQ13352 177 aaPredicted RBP16.59■□□□□ 0.25
SCARNA21-201ENST00000517026 PRR16Q569H4 304 aa16.59■□□□□ 0.25
SCARNA21-201ENST00000517026 METTL7BQ6UX53 244 aa16.59■□□□□ 0.25
SCARNA21-201ENST00000517026 NIPA1Q7RTP0 329 aa16.59■□□□□ 0.25
SCARNA21-201ENST00000517026 FBXO18Q8NFZ0 1043 aa16.59■□□□□ 0.25
SCARNA21-201ENST00000517026 PPTC7Q8NI37 304 aa16.59■□□□□ 0.25
SCARNA21-201ENST00000517026 PPP1R13LQ8WUF5 828 aa16.59■□□□□ 0.25
SCARNA21-201ENST00000517026 GLT1D1Q96MS3 346 aa16.59■□□□□ 0.25
SCARNA21-201ENST00000517026 BRMS1Q9HCU9 246 aa16.59■□□□□ 0.25
SCARNA21-201ENST00000517026 SMC3Q9UQE7 1217 aa16.59■□□□□ 0.25
SCARNA21-201ENST00000517026 UNC80Q8N2C7 3258 aa16.58■□□□□ 0.25
SCARNA21-201ENST00000517026 MAFGO15525 162 aa16.58■□□□□ 0.24
SCARNA21-201ENST00000517026 TDP2O95551 362 aa16.58■□□□□ 0.24
SCARNA21-201ENST00000517026 RTP1P59025 263 aa16.58■□□□□ 0.24
SCARNA21-201ENST00000517026 TRIM60Q495X7 471 aa16.58■□□□□ 0.24
SCARNA21-201ENST00000517026 SNX21Q969T3 373 aa16.58■□□□□ 0.24
SCARNA21-201ENST00000517026 LENG9Q96B70 501 aa16.58■□□□□ 0.24
SCARNA21-201ENST00000517026 MTG1Q9BT17 334 aaPredicted RBP16.58■□□□□ 0.24
SCARNA21-201ENST00000517026 POLR3EQ9NVU0 708 aa16.58■□□□□ 0.24
SCARNA21-201ENST00000517026 ATP11BQ9Y2G3 1177 aa16.58■□□□□ 0.24
SCARNA21-201ENST00000517026 GRIN2DO15399 1336 aa16.58■□□□□ 0.24
SCARNA21-201ENST00000517026 ELP1O95163 1332 aa16.58■□□□□ 0.24
SCARNA21-201ENST00000517026 FRMPD3Q5JV73 1810 aa16.58■□□□□ 0.24
SCARNA21-201ENST00000517026 LAMA2P24043 3122 aaKnown RBP16.57■□□□□ 0.24
SCARNA21-201ENST00000517026 K7ELQ4 463 aaPredicted RBP16.57■□□□□ 0.24
SCARNA21-201ENST00000517026 CABYRO75952 493 aa16.57■□□□□ 0.24
SCARNA21-201ENST00000517026 ZNF286BP0CG31 522 aa16.57■□□□□ 0.24
SCARNA21-201ENST00000517026 CHMP4BP1P59074 171 aa16.57■□□□□ 0.24
SCARNA21-201ENST00000517026 SNX17Q15036 470 aa16.57■□□□□ 0.24
SCARNA21-201ENST00000517026 SAFBQ15424 915 aaKnown RBP eCLIP16.57■□□□□ 0.24
SCARNA21-201ENST00000517026 DGKDQ16760 1214 aa16.57■□□□□ 0.24
SCARNA21-201ENST00000517026 LETM2Q2VYF4 491 aa16.57■□□□□ 0.24
SCARNA21-201ENST00000517026 C7orf61Q8IZ16 206 aa16.57■□□□□ 0.24
SCARNA21-201ENST00000517026 KAT2BQ92831 832 aa16.57■□□□□ 0.24
SCARNA21-201ENST00000517026 GPR20Q99678 358 aa16.57■□□□□ 0.24
SCARNA21-201ENST00000517026 FOXD4L1Q9NU39 408 aa16.57■□□□□ 0.24
SCARNA21-201ENST00000517026 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.57■□□□□ 0.24
SCARNA21-201ENST00000517026 CYP3A7-CYP3A51PA0A087WV96 503 aa16.56■□□□□ 0.24
SCARNA21-201ENST00000517026 A0A0U1RQG5 324 aaPredicted RBP16.56■□□□□ 0.24
SCARNA21-201ENST00000517026 DDX39AO00148 427 aaKnown RBP16.56■□□□□ 0.24
SCARNA21-201ENST00000517026 NOP56O00567 594 aaKnown RBP16.56■□□□□ 0.24
SCARNA21-201ENST00000517026 EVI5O60447 810 aa16.56■□□□□ 0.24
SCARNA21-201ENST00000517026 KPNA6O60684 536 aa16.56■□□□□ 0.24
SCARNA21-201ENST00000517026 PPFIA4O75335 1185 aa16.56■□□□□ 0.24
SCARNA21-201ENST00000517026 HOXD8P13378 290 aaPredicted RBP16.56■□□□□ 0.24
SCARNA21-201ENST00000517026 CYP3A7P24462 503 aa16.56■□□□□ 0.24
SCARNA21-201ENST00000517026 TLE2Q04725 743 aa16.56■□□□□ 0.24
SCARNA21-201ENST00000517026 ITGA7Q13683 1181 aa16.56■□□□□ 0.24
SCARNA21-201ENST00000517026 GIMAP8Q8ND71 665 aaPredicted RBP16.56■□□□□ 0.24
SCARNA21-201ENST00000517026 GJA10Q969M2 543 aa16.56■□□□□ 0.24
SCARNA21-201ENST00000517026 GSTTP1A0A1W2PQM5 241 aa16.55■□□□□ 0.24
SCARNA21-201ENST00000517026 KIF28PB7ZC32 967 aa16.55■□□□□ 0.24
SCARNA21-201ENST00000517026 ARVCFO00192 962 aa16.55■□□□□ 0.24
SCARNA21-201ENST00000517026 IPO5O00410 1097 aaKnown RBP16.55■□□□□ 0.24
SCARNA21-201ENST00000517026 MSH4O15457 936 aa16.55■□□□□ 0.24
SCARNA21-201ENST00000517026 DHX15O43143 795 aaKnown RBP16.55■□□□□ 0.24
SCARNA21-201ENST00000517026 PQBP1O60828 265 aaKnown RBP16.55■□□□□ 0.24
SCARNA21-201ENST00000517026 CDK7P50613 346 aa16.55■□□□□ 0.24
SCARNA21-201ENST00000517026 SETQ01105 290 aaPredicted RBP16.55■□□□□ 0.24
SCARNA21-201ENST00000517026 NBPF20Q3BBV1 942 aa16.55■□□□□ 0.24
SCARNA21-201ENST00000517026 UTP14CQ5TAP6 766 aaKnown RBP16.55■□□□□ 0.24
SCARNA21-201ENST00000517026 NEK8Q86SG6 692 aa16.55■□□□□ 0.24
SCARNA21-201ENST00000517026 MBOAT7Q96N66 472 aa16.55■□□□□ 0.24
SCARNA21-201ENST00000517026 SDF4Q9BRK5 362 aa16.55■□□□□ 0.24
SCARNA21-201ENST00000517026 ZNF577Q9BSK1 485 aa16.55■□□□□ 0.24
SCARNA21-201ENST00000517026 JPH1Q9HDC5 661 aaPredicted RBP16.55■□□□□ 0.24
SCARNA21-201ENST00000517026 KIF3AQ9Y496 699 aa16.55■□□□□ 0.24
SCARNA21-201ENST00000517026 ALPK3Q96L96 1907 aa16.55■□□□□ 0.24
SCARNA21-201ENST00000517026 NFASCO94856 1347 aa16.54■□□□□ 0.24
SCARNA21-201ENST00000517026 SOX1O00570 391 aaPredicted RBP16.54■□□□□ 0.24
SCARNA21-201ENST00000517026 WNT7AO00755 349 aa16.54■□□□□ 0.24
SCARNA21-201ENST00000517026 SLC37A4O43826 429 aa16.54■□□□□ 0.24
SCARNA21-201ENST00000517026 CCNT1O60563 726 aaKnown RBP16.54■□□□□ 0.24
SCARNA21-201ENST00000517026 CCNE2O96020 404 aa16.54■□□□□ 0.24
SCARNA21-201ENST00000517026 ATP2B1P20020 1258 aa16.54■□□□□ 0.24
SCARNA21-201ENST00000517026 Q4G0T1 1027 aa16.54■□□□□ 0.24
SCARNA21-201ENST00000517026 C1orf53Q5VUE5 145 aa16.54■□□□□ 0.24
SCARNA21-201ENST00000517026 TRIM50Q86XT4 487 aa16.54■□□□□ 0.24
SCARNA21-201ENST00000517026 HSCBQ8IWL3 235 aa16.54■□□□□ 0.24
SCARNA21-201ENST00000517026 SLC43A3Q8NBI5 491 aa16.54■□□□□ 0.24
SCARNA21-201ENST00000517026 C16orf70Q9BSU1 422 aa16.54■□□□□ 0.24
SCARNA21-201ENST00000517026 FOXP1Q9H334 677 aaPredicted RBP16.54■□□□□ 0.24
SCARNA21-201ENST00000517026 SLC9A2Q9UBY0 812 aa16.54■□□□□ 0.24
SCARNA21-201ENST00000517026 DDX25Q9UHL0 483 aaKnown RBP16.54■□□□□ 0.24
SCARNA21-201ENST00000517026 ZMYND8Q9ULU4 1186 aaPredicted RBP16.54■□□□□ 0.24
SCARNA21-201ENST00000517026 KIAA1217Q5T5P2 1943 aa16.53■□□□□ 0.24
SCARNA21-201ENST00000517026 A0A1W2PPC1 479 aa16.53■□□□□ 0.24
SCARNA21-201ENST00000517026 LGALS2P05162 132 aa16.53■□□□□ 0.24
SCARNA21-201ENST00000517026 PSEN2P49810 448 aa16.53■□□□□ 0.24
SCARNA21-201ENST00000517026 ACTR2P61160 394 aa16.53■□□□□ 0.24
SCARNA21-201ENST00000517026 LARP1BQ659C4 914 aaKnown RBP16.53■□□□□ 0.24
SCARNA21-201ENST00000517026 MOXD1Q6UVY6 613 aa16.53■□□□□ 0.24
SCARNA21-201ENST00000517026 SEPT1Q8WYJ6 367 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms