RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 DLX3O60479 287 aa4.53□□□□□ -1.68
RNU6-1088P-201ENST00000516850 STK10O94804 968 aaKnown RBP4.53□□□□□ -1.68
RNU6-1088P-201ENST00000516850 LRG1P02750 347 aa4.53□□□□□ -1.68
RNU6-1088P-201ENST00000516850 GNAT1P11488 350 aa4.53□□□□□ -1.68
RNU6-1088P-201ENST00000516850 ZNF28P17035 718 aa4.53□□□□□ -1.68
RNU6-1088P-201ENST00000516850 IFRD2Q12894 506 aaPredicted RBP4.53□□□□□ -1.68
RNU6-1088P-201ENST00000516850 PUM1Q14671 1186 aaKnown RBP eCLIP4.53□□□□□ -1.68
RNU6-1088P-201ENST00000516850 KIZQ2M2Z5 673 aa4.53□□□□□ -1.68
RNU6-1088P-201ENST00000516850 VASNQ6EMK4 673 aa4.53□□□□□ -1.68
RNU6-1088P-201ENST00000516850 TRMT10BQ6PF06 316 aaKnown RBP4.53□□□□□ -1.68
RNU6-1088P-201ENST00000516850 TMC5Q6UXY8 1006 aa4.53□□□□□ -1.68
RNU6-1088P-201ENST00000516850 NSMFQ6X4W1 530 aa4.53□□□□□ -1.68
RNU6-1088P-201ENST00000516850 IFNL3Q8IZI9 196 aa4.53□□□□□ -1.68
RNU6-1088P-201ENST00000516850 ST13P5Q8NFI4 369 aaPredicted RBP4.53□□□□□ -1.68
RNU6-1088P-201ENST00000516850 PIP4K2CQ8TBX8 421 aa4.53□□□□□ -1.68
RNU6-1088P-201ENST00000516850 SAMD11Q96NU1 681 aa4.53□□□□□ -1.68
RNU6-1088P-201ENST00000516850 IPO9Q96P70 1041 aaKnown RBP4.53□□□□□ -1.68
RNU6-1088P-201ENST00000516850 GMLQ99445 158 aa4.53□□□□□ -1.68
RNU6-1088P-201ENST00000516850 ZFYVE21Q9BQ24 234 aa4.53□□□□□ -1.68
RNU6-1088P-201ENST00000516850 BARX1Q9HBU1 254 aaPredicted RBP4.53□□□□□ -1.68
RNU6-1088P-201ENST00000516850 JADE2Q9NQC1 790 aa4.53□□□□□ -1.68
RNU6-1088P-201ENST00000516850 ASH2LQ9UBL3 628 aa4.53□□□□□ -1.68
RNU6-1088P-201ENST00000516850 MYRFQ9Y2G1 1151 aa4.53□□□□□ -1.68
RNU6-1088P-201ENST00000516850 ZDHHC9Q9Y397 364 aa4.53□□□□□ -1.68
RNU6-1088P-201ENST00000516850 TRAV20A0A0B4J274 112 aa4.52□□□□□ -1.69
RNU6-1088P-201ENST00000516850 LAMTOR5O43504 91 aa4.52□□□□□ -1.69
RNU6-1088P-201ENST00000516850 FBXO21O94952 628 aa4.52□□□□□ -1.69
RNU6-1088P-201ENST00000516850 FGFR1P11362 822 aa4.52□□□□□ -1.69
RNU6-1088P-201ENST00000516850 GRK2P25098 689 aa4.52□□□□□ -1.69
RNU6-1088P-201ENST00000516850 GRK3P35626 688 aa4.52□□□□□ -1.69
RNU6-1088P-201ENST00000516850 ADAM17P78536 824 aa4.52□□□□□ -1.69
RNU6-1088P-201ENST00000516850 GRIN1Q05586 938 aa4.52□□□□□ -1.69
RNU6-1088P-201ENST00000516850 CPZQ66K79 652 aa4.52□□□□□ -1.69
RNU6-1088P-201ENST00000516850 ARHGEF18Q6ZSZ5 1173 aa4.52□□□□□ -1.69
RNU6-1088P-201ENST00000516850 OTOP3Q7RTS5 596 aa4.52□□□□□ -1.69
RNU6-1088P-201ENST00000516850 CKAP2LQ8IYA6 745 aa4.52□□□□□ -1.69
RNU6-1088P-201ENST00000516850 TTC9BQ8N6N2 239 aa4.52□□□□□ -1.69
RNU6-1088P-201ENST00000516850 TTLL11Q8NHH1 800 aa4.52□□□□□ -1.69
RNU6-1088P-201ENST00000516850 RBM15Q96T37 977 aaKnown RBP eCLIP4.52□□□□□ -1.69
RNU6-1088P-201ENST00000516850 KCNJ15Q99712 375 aa4.52□□□□□ -1.69
RNU6-1088P-201ENST00000516850 NPEPPSL1A6NEC2 478 aa4.51□□□□□ -1.69
RNU6-1088P-201ENST00000516850 FAM47E-STBD1D6RA91 191 aa4.51□□□□□ -1.69
RNU6-1088P-201ENST00000516850 KLF4O43474 513 aa4.51□□□□□ -1.69
RNU6-1088P-201ENST00000516850 MSCO60682 206 aa4.51□□□□□ -1.69
RNU6-1088P-201ENST00000516850 CAPNS1P04632 268 aa4.51□□□□□ -1.69
RNU6-1088P-201ENST00000516850 PABPC1P11940 636 aaKnown RBP4.51□□□□□ -1.69
RNU6-1088P-201ENST00000516850 MLLT6P55198 1093 aaPredicted RBP4.51□□□□□ -1.69
RNU6-1088P-201ENST00000516850 RAB33AQ14088 237 aa4.51□□□□□ -1.69
RNU6-1088P-201ENST00000516850 LBX2Q6XYB7 198 aa4.51□□□□□ -1.69
RNU6-1088P-201ENST00000516850 EP400NLQ6ZTU2 488 aa4.51□□□□□ -1.69
RNU6-1088P-201ENST00000516850 ZNF428Q96B54 188 aa4.51□□□□□ -1.69
RNU6-1088P-201ENST00000516850 YTHDC1Q96MU7 727 aaKnown RBP4.51□□□□□ -1.69
RNU6-1088P-201ENST00000516850 ALG1Q9BT22 464 aa4.51□□□□□ -1.69
RNU6-1088P-201ENST00000516850 DLL4Q9NR61 685 aa4.51□□□□□ -1.69
RNU6-1088P-201ENST00000516850 HSPBP1Q9NZL4 362 aa4.51□□□□□ -1.69
RNU6-1088P-201ENST00000516850 E9PSI1 815 aa4.5□□□□□ -1.69
RNU6-1088P-201ENST00000516850 B4GALT4O60513 344 aa4.5□□□□□ -1.69
RNU6-1088P-201ENST00000516850 APPP05067 770 aa4.5□□□□□ -1.69
RNU6-1088P-201ENST00000516850 ENO2P09104 434 aaPredicted RBP4.5□□□□□ -1.69
RNU6-1088P-201ENST00000516850 COL6A2P12110 1019 aa4.5□□□□□ -1.69
RNU6-1088P-201ENST00000516850 GPR85P60893 370 aa4.5□□□□□ -1.69
RNU6-1088P-201ENST00000516850 PPP2CBP62714 309 aa4.5□□□□□ -1.69
RNU6-1088P-201ENST00000516850 PPP2CAP67775 309 aa4.5□□□□□ -1.69
RNU6-1088P-201ENST00000516850 NFATC3Q12968 1075 aa4.5□□□□□ -1.69
RNU6-1088P-201ENST00000516850 TUSC3Q13454 348 aa4.5□□□□□ -1.69
RNU6-1088P-201ENST00000516850 PAN2Q504Q3 1202 aaKnown RBP4.5□□□□□ -1.69
RNU6-1088P-201ENST00000516850 KCNT2Q6UVM3 1135 aa4.5□□□□□ -1.69
RNU6-1088P-201ENST00000516850 KBTBD2Q8IY47 623 aa4.5□□□□□ -1.69
RNU6-1088P-201ENST00000516850 KLHL36Q8N4N3 616 aa4.5□□□□□ -1.69
RNU6-1088P-201ENST00000516850 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.5□□□□□ -1.69
RNU6-1088P-201ENST00000516850 CLEC4DQ8WXI8 215 aa4.5□□□□□ -1.69
RNU6-1088P-201ENST00000516850 C8orf49Q96NF6 230 aa4.5□□□□□ -1.69
RNU6-1088P-201ENST00000516850 CDC6Q99741 560 aa4.5□□□□□ -1.69
RNU6-1088P-201ENST00000516850 CDIP1Q9H305 208 aa4.5□□□□□ -1.69
RNU6-1088P-201ENST00000516850 PPARGC1AQ9UBK2 798 aaKnown RBP4.5□□□□□ -1.69
RNU6-1088P-201ENST00000516850 DSEQ9UL01 958 aa4.5□□□□□ -1.69
RNU6-1088P-201ENST00000516850 B4GALT3O60512 393 aa4.49□□□□□ -1.69
RNU6-1088P-201ENST00000516850 SOD2P04179 222 aa4.49□□□□□ -1.69
RNU6-1088P-201ENST00000516850 FAHP16930 419 aa4.49□□□□□ -1.69
RNU6-1088P-201ENST00000516850 KRTAP10-2P60368 255 aa4.49□□□□□ -1.69
RNU6-1088P-201ENST00000516850 SMAD2Q15796 467 aaKnown RBP4.49□□□□□ -1.69
RNU6-1088P-201ENST00000516850 STYK1Q6J9G0 422 aa4.49□□□□□ -1.69
RNU6-1088P-201ENST00000516850 LIMS2Q7Z4I7 341 aa4.49□□□□□ -1.69
RNU6-1088P-201ENST00000516850 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.49□□□□□ -1.69
RNU6-1088P-201ENST00000516850 UHMK1Q8TAS1 419 aaKnown RBP4.49□□□□□ -1.69
RNU6-1088P-201ENST00000516850 ZNF669Q96BR6 464 aaPredicted RBP4.49□□□□□ -1.69
RNU6-1088P-201ENST00000516850 KRTAP4-5Q9BYR2 181 aa4.49□□□□□ -1.69
RNU6-1088P-201ENST00000516850 TMPRSS5Q9H3S3 457 aa4.49□□□□□ -1.69
RNU6-1088P-201ENST00000516850 DEF6Q9H4E7 631 aa4.49□□□□□ -1.69
RNU6-1088P-201ENST00000516850 ARHGEF4Q9NR80 690 aa4.49□□□□□ -1.69
RNU6-1088P-201ENST00000516850 ARHGAP20Q9P2F6 1191 aa4.49□□□□□ -1.69
RNU6-1088P-201ENST00000516850 AQP7O14520 342 aa4.48□□□□□ -1.69
RNU6-1088P-201ENST00000516850 CHGBP05060 677 aa4.48□□□□□ -1.69
RNU6-1088P-201ENST00000516850 CKMP06732 381 aa4.48□□□□□ -1.69
RNU6-1088P-201ENST00000516850 KCTD1Q719H9 257 aa4.48□□□□□ -1.69
RNU6-1088P-201ENST00000516850 MTDHQ86UE4 582 aaKnown RBP4.48□□□□□ -1.69
RNU6-1088P-201ENST00000516850 CIR1Q86X95 450 aaPredicted RBP4.48□□□□□ -1.69
RNU6-1088P-201ENST00000516850 SCUBE1Q8IWY4 988 aa4.48□□□□□ -1.69
RNU6-1088P-201ENST00000516850 RBM12BQ8IXT5 1001 aaKnown RBP4.48□□□□□ -1.69
RNU6-1088P-201ENST00000516850 NLGN4XQ8N0W4 816 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms