RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 PLVAPQ9BX97 442 aa4.17□□□□□ -1.74
SCARNA13-201ENST00000516672 TMOD4Q9NZQ9 345 aa4.17□□□□□ -1.74
SCARNA13-201ENST00000516672 MINPP1Q9UNW1 487 aa4.17□□□□□ -1.74
SCARNA13-201ENST00000516672 TELO2Q9Y4R8 837 aa4.17□□□□□ -1.74
SCARNA13-201ENST00000516672 CACNA1EQ15878 2313 aa4.17□□□□□ -1.74
SCARNA13-201ENST00000516672 PHLPP2Q6ZVD8 1323 aa4.17□□□□□ -1.74
SCARNA13-201ENST00000516672 TMEM200CA6NKL6 621 aa4.16□□□□□ -1.74
SCARNA13-201ENST00000516672 ATP9AO75110 1047 aa4.16□□□□□ -1.74
SCARNA13-201ENST00000516672 TARSP26639 723 aaKnown RBP4.16□□□□□ -1.74
SCARNA13-201ENST00000516672 CSTF2P33240 577 aaKnown RBP eCLIP4.16□□□□□ -1.74
SCARNA13-201ENST00000516672 OXCT1P55809 520 aa4.16□□□□□ -1.74
SCARNA13-201ENST00000516672 PDE4BQ07343 736 aa4.16□□□□□ -1.74
SCARNA13-201ENST00000516672 KCNH2Q12809 1159 aa4.16□□□□□ -1.74
SCARNA13-201ENST00000516672 SEMA3FQ13275 785 aa4.16□□□□□ -1.74
SCARNA13-201ENST00000516672 CAMK2BQ13554 666 aa4.16□□□□□ -1.74
SCARNA13-201ENST00000516672 NEUROD1Q13562 356 aa4.16□□□□□ -1.74
SCARNA13-201ENST00000516672 MTMR2Q13614 643 aa4.16□□□□□ -1.74
SCARNA13-201ENST00000516672 RTL5Q5HYW3 569 aaPredicted RBP4.16□□□□□ -1.74
SCARNA13-201ENST00000516672 MFSD14BQ5SR56 506 aa4.16□□□□□ -1.74
SCARNA13-201ENST00000516672 KIAA1841Q6NSI8 718 aa4.16□□□□□ -1.74
SCARNA13-201ENST00000516672 TMPRSS7Q7RTY8 843 aa4.16□□□□□ -1.74
SCARNA13-201ENST00000516672 KBTBD6Q86V97 674 aa4.16□□□□□ -1.74
SCARNA13-201ENST00000516672 TOP1MTQ969P6 601 aa4.16□□□□□ -1.74
SCARNA13-201ENST00000516672 CPNE5Q9HCH3 593 aa4.16□□□□□ -1.74
SCARNA13-201ENST00000516672 STARD5Q9NSY2 213 aa4.16□□□□□ -1.74
SCARNA13-201ENST00000516672 TCP11L1Q9NUJ3 509 aa4.16□□□□□ -1.74
SCARNA13-201ENST00000516672 ZHX1Q9UKY1 873 aaPredicted RBP4.16□□□□□ -1.74
SCARNA13-201ENST00000516672 ATG2BQ96BY7 2078 aa4.16□□□□□ -1.74
SCARNA13-201ENST00000516672 TGP01266 2768 aa4.16□□□□□ -1.74
SCARNA13-201ENST00000516672 MROH5Q6ZUA9 1318 aa4.16□□□□□ -1.74
SCARNA13-201ENST00000516672 MICAL3Q7RTP6 2002 aa4.16□□□□□ -1.74
SCARNA13-201ENST00000516672 TRIM66O15016 1216 aa4.15□□□□□ -1.75
SCARNA13-201ENST00000516672 NCAM2O15394 837 aa4.15□□□□□ -1.75
SCARNA13-201ENST00000516672 CAVIN2O95810 425 aa4.15□□□□□ -1.75
SCARNA13-201ENST00000516672 IL1R1P14778 569 aa4.15□□□□□ -1.75
SCARNA13-201ENST00000516672 CCDC173Q0VFZ6 552 aa4.15□□□□□ -1.75
SCARNA13-201ENST00000516672 SEMA3BQ13214 749 aa4.15□□□□□ -1.75
SCARNA13-201ENST00000516672 ATAT1Q5SQI0 421 aa4.15□□□□□ -1.75
SCARNA13-201ENST00000516672 RARS2Q5T160 578 aaKnown RBP4.15□□□□□ -1.75
SCARNA13-201ENST00000516672 MAMDC2Q7Z304 686 aaPredicted RBP4.15□□□□□ -1.75
SCARNA13-201ENST00000516672 CACNA2D4Q7Z3S7 1137 aa4.15□□□□□ -1.75
SCARNA13-201ENST00000516672 PLEKHM2Q8IWE5 1019 aa4.15□□□□□ -1.75
SCARNA13-201ENST00000516672 EXD3Q8N9H8 876 aa4.15□□□□□ -1.75
SCARNA13-201ENST00000516672 AFAP1L1Q8TED9 768 aa4.15□□□□□ -1.75
SCARNA13-201ENST00000516672 SSC4DQ8WTU2 575 aa4.15□□□□□ -1.75
SCARNA13-201ENST00000516672 CLP1Q92989 425 aaKnown RBP4.15□□□□□ -1.75
SCARNA13-201ENST00000516672 P2RX5Q93086 422 aa4.15□□□□□ -1.75
SCARNA13-201ENST00000516672 IL17RAQ96F46 866 aa4.15□□□□□ -1.75
SCARNA13-201ENST00000516672 CCDC85AQ96PX6 553 aaPredicted RBP4.15□□□□□ -1.75
SCARNA13-201ENST00000516672 GPR20Q99678 358 aa4.15□□□□□ -1.75
SCARNA13-201ENST00000516672 TBC1D2Q9BYX2 928 aa4.15□□□□□ -1.75
SCARNA13-201ENST00000516672 POLMQ9NP87 494 aaPredicted RBP4.15□□□□□ -1.75
SCARNA13-201ENST00000516672 SLC2A4RGQ9NR83 387 aa4.15□□□□□ -1.75
SCARNA13-201ENST00000516672 AAASQ9NRG9 546 aa4.15□□□□□ -1.75
SCARNA13-201ENST00000516672 FAM217BQ9NTX9 383 aaPredicted RBP4.15□□□□□ -1.75
SCARNA13-201ENST00000516672 PNMA8BQ9ULN7 279 aaPredicted RBP4.15□□□□□ -1.75
SCARNA13-201ENST00000516672 IQSEC3Q9UPP2 1182 aaPredicted RBP4.15□□□□□ -1.75
SCARNA13-201ENST00000516672 CSPG4Q6UVK1 2322 aa4.15□□□□□ -1.75
SCARNA13-201ENST00000516672 E9PSI1 815 aa4.14□□□□□ -1.75
SCARNA13-201ENST00000516672 KHNYNO15037 678 aaKnown RBP4.14□□□□□ -1.75
SCARNA13-201ENST00000516672 RNF224P0DH78 156 aa4.14□□□□□ -1.75
SCARNA13-201ENST00000516672 AFMP43652 599 aa4.14□□□□□ -1.75
SCARNA13-201ENST00000516672 CCR3P51677 355 aa4.14□□□□□ -1.75
SCARNA13-201ENST00000516672 BACE1P56817 501 aa4.14□□□□□ -1.75
SCARNA13-201ENST00000516672 TMPRSS3P57727 454 aa4.14□□□□□ -1.75
SCARNA13-201ENST00000516672 NKX3-2P78367 333 aa4.14□□□□□ -1.75
SCARNA13-201ENST00000516672 SATB1Q01826 763 aa4.14□□□□□ -1.75
SCARNA13-201ENST00000516672 PRKCQQ04759 706 aa4.14□□□□□ -1.75
SCARNA13-201ENST00000516672 NFIAQ12857 509 aa4.14□□□□□ -1.75
SCARNA13-201ENST00000516672 FZD5Q13467 585 aa4.14□□□□□ -1.75
SCARNA13-201ENST00000516672 MLF2Q15773 248 aaPredicted RBP4.14□□□□□ -1.75
SCARNA13-201ENST00000516672 ZXDCQ2QGD7 858 aaPredicted RBP4.14□□□□□ -1.75
SCARNA13-201ENST00000516672 PREPLQ4J6C6 727 aaPredicted RBP4.14□□□□□ -1.75
SCARNA13-201ENST00000516672 HSP90AB3PQ58FF7 597 aa4.14□□□□□ -1.75
SCARNA13-201ENST00000516672 APOBEC3HQ6NTF7 200 aaKnown RBP4.14□□□□□ -1.75
SCARNA13-201ENST00000516672 SLC4A10Q6U841 1118 aa4.14□□□□□ -1.75
SCARNA13-201ENST00000516672 CCDC149Q6ZUS6 474 aa4.14□□□□□ -1.75
SCARNA13-201ENST00000516672 LRRC8DQ7L1W4 858 aa4.14□□□□□ -1.75
SCARNA13-201ENST00000516672 SPACA3Q8IXA5 215 aa4.14□□□□□ -1.75
SCARNA13-201ENST00000516672 C12orf76Q8N812 135 aaPredicted RBP4.14□□□□□ -1.75
SCARNA13-201ENST00000516672 PDCD7Q8N8D1 485 aaKnown RBP4.14□□□□□ -1.75
SCARNA13-201ENST00000516672 KLHL23Q8NBE8 558 aa4.14□□□□□ -1.75
SCARNA13-201ENST00000516672 RASGRP4Q8TDF6 673 aa4.14□□□□□ -1.75
SCARNA13-201ENST00000516672 BBXQ8WY36 941 aaPredicted RBP4.14□□□□□ -1.75
SCARNA13-201ENST00000516672 CASP10Q92851 521 aa4.14□□□□□ -1.75
SCARNA13-201ENST00000516672 TEKT1Q969V4 418 aa4.14□□□□□ -1.75
SCARNA13-201ENST00000516672 MOV10L1Q9BXT6 1211 aaKnown RBP4.14□□□□□ -1.75
SCARNA13-201ENST00000516672 MED13Q9UHV7 2174 aa4.14□□□□□ -1.75
SCARNA13-201ENST00000516672 UBE4BO95155 1302 aa4.14□□□□□ -1.75
SCARNA13-201ENST00000516672 PTPRBP23467 1997 aa4.13□□□□□ -1.75
SCARNA13-201ENST00000516672 USP17L5A8MUK1 530 aa4.13□□□□□ -1.75
SCARNA13-201ENST00000516672 UPK3BL1B0FP48 263 aa4.13□□□□□ -1.75
SCARNA13-201ENST00000516672 UPK3BL2E5RIL1 263 aa4.13□□□□□ -1.75
SCARNA13-201ENST00000516672 CLDN1O95832 211 aa4.13□□□□□ -1.75
SCARNA13-201ENST00000516672 PGK2P07205 417 aa4.13□□□□□ -1.75
SCARNA13-201ENST00000516672 HLA-EP13747 358 aa4.13□□□□□ -1.75
SCARNA13-201ENST00000516672 SELPP16109 830 aa4.13□□□□□ -1.75
SCARNA13-201ENST00000516672 ERCC3P19447 782 aa4.13□□□□□ -1.75
SCARNA13-201ENST00000516672 SEMG2Q02383 582 aa4.13□□□□□ -1.75
SCARNA13-201ENST00000516672 CREB5Q02930 508 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms