RNA–Protein interactions for RNA: ENST00000516520.1

SCARNA16.2-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 172 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.2-201ENST00000516520 HNRNPLLQ8WVV9 542 aaKnown RBP4.17□□□□□ -1.74
SCARNA16.2-201ENST00000516520 C8orf49Q96NF6 230 aa4.17□□□□□ -1.74
SCARNA16.2-201ENST00000516520 ZFYVE21Q9BQ24 234 aa4.17□□□□□ -1.74
SCARNA16.2-201ENST00000516520 AARSD1Q9BTE6 412 aaKnown RBP4.17□□□□□ -1.74
SCARNA16.2-201ENST00000516520 PHF20Q9BVI0 1012 aa4.17□□□□□ -1.74
SCARNA16.2-201ENST00000516520 SLC6A20Q9NP91 592 aa4.17□□□□□ -1.74
SCARNA16.2-201ENST00000516520 CROTQ9UKG9 612 aa4.17□□□□□ -1.74
SCARNA16.2-201ENST00000516520 DLX3O60479 287 aa4.16□□□□□ -1.74
SCARNA16.2-201ENST00000516520 B4GALT3O60512 393 aa4.16□□□□□ -1.74
SCARNA16.2-201ENST00000516520 FGFR1P11362 822 aa4.16□□□□□ -1.74
SCARNA16.2-201ENST00000516520 ZNF20P17024 532 aa4.16□□□□□ -1.74
SCARNA16.2-201ENST00000516520 GRK2P25098 689 aa4.16□□□□□ -1.74
SCARNA16.2-201ENST00000516520 GRK3P35626 688 aa4.16□□□□□ -1.74
SCARNA16.2-201ENST00000516520 GRIA2P42262 883 aa4.16□□□□□ -1.74
SCARNA16.2-201ENST00000516520 SPIRE1Q08AE8 756 aa4.16□□□□□ -1.74
SCARNA16.2-201ENST00000516520 KIZQ2M2Z5 673 aa4.16□□□□□ -1.74
SCARNA16.2-201ENST00000516520 VASNQ6EMK4 673 aa4.16□□□□□ -1.74
SCARNA16.2-201ENST00000516520 PKN3Q6P5Z2 889 aa4.16□□□□□ -1.74
SCARNA16.2-201ENST00000516520 TRMT10BQ6PF06 316 aaKnown RBP4.16□□□□□ -1.74
SCARNA16.2-201ENST00000516520 ARHGEF18Q6ZSZ5 1173 aa4.16□□□□□ -1.74
SCARNA16.2-201ENST00000516520 ANKS3Q6ZW76 656 aa4.16□□□□□ -1.74
SCARNA16.2-201ENST00000516520 DPH6Q7L8W6 267 aa4.16□□□□□ -1.74
SCARNA16.2-201ENST00000516520 KLHL36Q8N4N3 616 aa4.16□□□□□ -1.74
SCARNA16.2-201ENST00000516520 ST13P5Q8NFI4 369 aaPredicted RBP4.16□□□□□ -1.74
SCARNA16.2-201ENST00000516520 DVL3Q92997 716 aaPredicted RBP4.16□□□□□ -1.74
SCARNA16.2-201ENST00000516520 MBD6Q96DN6 1003 aa4.16□□□□□ -1.74
SCARNA16.2-201ENST00000516520 GMLQ99445 158 aa4.16□□□□□ -1.74
SCARNA16.2-201ENST00000516520 CDIP1Q9H305 208 aa4.16□□□□□ -1.74
SCARNA16.2-201ENST00000516520 TMPRSS5Q9H3S3 457 aa4.16□□□□□ -1.74
SCARNA16.2-201ENST00000516520 BARX1Q9HBU1 254 aaPredicted RBP4.16□□□□□ -1.74
SCARNA16.2-201ENST00000516520 DLL4Q9NR61 685 aa4.16□□□□□ -1.74
SCARNA16.2-201ENST00000516520 ST7Q9NRC1 585 aa4.16□□□□□ -1.74
SCARNA16.2-201ENST00000516520 NPEPPSL1A6NEC2 478 aa4.15□□□□□ -1.75
SCARNA16.2-201ENST00000516520 CHGBP05060 677 aa4.15□□□□□ -1.75
SCARNA16.2-201ENST00000516520 EPHB4P54760 987 aa4.15□□□□□ -1.75
SCARNA16.2-201ENST00000516520 MLLT6P55198 1093 aaPredicted RBP4.15□□□□□ -1.75
SCARNA16.2-201ENST00000516520 TMC5Q6UXY8 1006 aa4.15□□□□□ -1.75
SCARNA16.2-201ENST00000516520 LBX2Q6XYB7 198 aa4.15□□□□□ -1.75
SCARNA16.2-201ENST00000516520 OTOP3Q7RTS5 596 aa4.15□□□□□ -1.75
SCARNA16.2-201ENST00000516520 LRRC47Q8N1G4 583 aaKnown RBP4.15□□□□□ -1.75
SCARNA16.2-201ENST00000516520 CELF2-AS1Q8N7Q2 184 aa4.15□□□□□ -1.75
SCARNA16.2-201ENST00000516520 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.15□□□□□ -1.75
SCARNA16.2-201ENST00000516520 PIP4K2CQ8TBX8 421 aa4.15□□□□□ -1.75
SCARNA16.2-201ENST00000516520 ZCCHC14Q8WYQ9 949 aaKnown RBP4.15□□□□□ -1.75
SCARNA16.2-201ENST00000516520 SSBP3Q9BWW4 388 aaPredicted RBP4.15□□□□□ -1.75
SCARNA16.2-201ENST00000516520 JAM3Q9BX67 310 aa4.15□□□□□ -1.75
SCARNA16.2-201ENST00000516520 KRTAP3-1Q9BYR8 98 aa4.15□□□□□ -1.75
SCARNA16.2-201ENST00000516520 TRAV20A0A0B4J274 112 aa4.14□□□□□ -1.75
SCARNA16.2-201ENST00000516520 SLC27A2O14975 620 aa4.14□□□□□ -1.75
SCARNA16.2-201ENST00000516520 GNAT1P11488 350 aa4.14□□□□□ -1.75
SCARNA16.2-201ENST00000516520 TNFRSF1AP19438 455 aa4.14□□□□□ -1.75
SCARNA16.2-201ENST00000516520 GPR85P60893 370 aa4.14□□□□□ -1.75
SCARNA16.2-201ENST00000516520 PPP2CBP62714 309 aa4.14□□□□□ -1.75
SCARNA16.2-201ENST00000516520 PPP2CAP67775 309 aa4.14□□□□□ -1.75
SCARNA16.2-201ENST00000516520 IFRD2Q12894 506 aaPredicted RBP4.14□□□□□ -1.75
SCARNA16.2-201ENST00000516520 SMAD2Q15796 467 aaKnown RBP4.14□□□□□ -1.75
SCARNA16.2-201ENST00000516520 CIR1Q86X95 450 aaPredicted RBP4.14□□□□□ -1.75
SCARNA16.2-201ENST00000516520 KBTBD2Q8IY47 623 aa4.14□□□□□ -1.75
SCARNA16.2-201ENST00000516520 IFNL3Q8IZI9 196 aa4.14□□□□□ -1.75
SCARNA16.2-201ENST00000516520 DTX3Q8N9I9 347 aa4.14□□□□□ -1.75
SCARNA16.2-201ENST00000516520 UHMK1Q8TAS1 419 aaKnown RBP4.14□□□□□ -1.75
SCARNA16.2-201ENST00000516520 KISS1RQ969F8 398 aaPredicted RBP4.14□□□□□ -1.75
SCARNA16.2-201ENST00000516520 ZNF669Q96BR6 464 aaPredicted RBP4.14□□□□□ -1.75
SCARNA16.2-201ENST00000516520 CDK5RAP1Q96SZ6 601 aaKnown RBP4.14□□□□□ -1.75
SCARNA16.2-201ENST00000516520 PDGFDQ9GZP0 370 aaPredicted RBP4.14□□□□□ -1.75
SCARNA16.2-201ENST00000516520 PPP4R1LQ9P1A2 415 aa4.14□□□□□ -1.75
SCARNA16.2-201ENST00000516520 PPARGC1AQ9UBK2 798 aaKnown RBP4.14□□□□□ -1.75
SCARNA16.2-201ENST00000516520 FAM47E-STBD1D6RA91 191 aa4.13□□□□□ -1.75
SCARNA16.2-201ENST00000516520 MATN3O15232 486 aa4.13□□□□□ -1.75
SCARNA16.2-201ENST00000516520 PRODHO43272 600 aa4.13□□□□□ -1.75
SCARNA16.2-201ENST00000516520 KLF4O43474 513 aa4.13□□□□□ -1.75
SCARNA16.2-201ENST00000516520 MSCO60682 206 aa4.13□□□□□ -1.75
SCARNA16.2-201ENST00000516520 FBXO21O94952 628 aa4.13□□□□□ -1.75
SCARNA16.2-201ENST00000516520 PABPC1P11940 636 aaKnown RBP4.13□□□□□ -1.75
SCARNA16.2-201ENST00000516520 FAHP16930 419 aa4.13□□□□□ -1.75
SCARNA16.2-201ENST00000516520 GRIN1Q05586 938 aa4.13□□□□□ -1.75
SCARNA16.2-201ENST00000516520 NFATC3Q12968 1075 aa4.13□□□□□ -1.75
SCARNA16.2-201ENST00000516520 TUSC3Q13454 348 aa4.13□□□□□ -1.75
SCARNA16.2-201ENST00000516520 PAN2Q504Q3 1202 aaKnown RBP4.13□□□□□ -1.75
SCARNA16.2-201ENST00000516520 SLFN13Q68D06 897 aa4.13□□□□□ -1.75
SCARNA16.2-201ENST00000516520 STYK1Q6J9G0 422 aa4.13□□□□□ -1.75
SCARNA16.2-201ENST00000516520 NSMFQ6X4W1 530 aa4.13□□□□□ -1.75
SCARNA16.2-201ENST00000516520 LIMS2Q7Z4I7 341 aa4.13□□□□□ -1.75
SCARNA16.2-201ENST00000516520 IGDCC4Q8TDY8 1250 aa4.13□□□□□ -1.75
SCARNA16.2-201ENST00000516520 ALG1Q9BT22 464 aa4.13□□□□□ -1.75
SCARNA16.2-201ENST00000516520 TRIM55Q9BYV6 548 aa4.13□□□□□ -1.75
SCARNA16.2-201ENST00000516520 JADE2Q9NQC1 790 aa4.13□□□□□ -1.75
SCARNA16.2-201ENST00000516520 ARHGEF4Q9NR80 690 aa4.13□□□□□ -1.75
SCARNA16.2-201ENST00000516520 ADAM29Q9UKF5 820 aa4.13□□□□□ -1.75
SCARNA16.2-201ENST00000516520 TSC22D4Q9Y3Q8 395 aa4.13□□□□□ -1.75
SCARNA16.2-201ENST00000516520 SOD2P04179 222 aa4.12□□□□□ -1.75
SCARNA16.2-201ENST00000516520 ENO2P09104 434 aaPredicted RBP4.12□□□□□ -1.75
SCARNA16.2-201ENST00000516520 COL6A1P12109 1028 aa4.12□□□□□ -1.75
SCARNA16.2-201ENST00000516520 ZXDAP98168 799 aa4.12□□□□□ -1.75
SCARNA16.2-201ENST00000516520 RAB33AQ14088 237 aa4.12□□□□□ -1.75
SCARNA16.2-201ENST00000516520 HABP4Q5JVS0 413 aaKnown RBP4.12□□□□□ -1.75
SCARNA16.2-201ENST00000516520 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.12□□□□□ -1.75
SCARNA16.2-201ENST00000516520 RALYLQ86SE5 291 aaKnown RBP4.12□□□□□ -1.75
SCARNA16.2-201ENST00000516520 PROSER1Q86XN7 944 aa4.12□□□□□ -1.75
SCARNA16.2-201ENST00000516520 REXO1L1PQ8IX06 675 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms