RNA–Protein interactions for RNA: ENST00000516133.1

SCARNA16.1-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 183 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.1-201ENST00000516133 MEIS1O00470 390 aa12.79□□□□□ -0.36
SCARNA16.1-201ENST00000516133 PPFIA3O75145 1194 aa12.79□□□□□ -0.36
SCARNA16.1-201ENST00000516133 DEXIO95424 95 aa12.79□□□□□ -0.36
SCARNA16.1-201ENST00000516133 ZNF286BP0CG31 522 aa12.79□□□□□ -0.36
SCARNA16.1-201ENST00000516133 CYP2C9P11712 490 aa12.79□□□□□ -0.36
SCARNA16.1-201ENST00000516133 CSF2RAP15509 400 aa12.79□□□□□ -0.36
SCARNA16.1-201ENST00000516133 KCNA2P16389 499 aa12.79□□□□□ -0.36
SCARNA16.1-201ENST00000516133 NEK4P51957 841 aa12.79□□□□□ -0.36
SCARNA16.1-201ENST00000516133 EPHB4P54760 987 aa12.79□□□□□ -0.36
SCARNA16.1-201ENST00000516133 STK3Q13188 491 aa12.79□□□□□ -0.36
SCARNA16.1-201ENST00000516133 BFSP2Q13515 415 aa12.79□□□□□ -0.36
SCARNA16.1-201ENST00000516133 PTGISQ16647 500 aa12.79□□□□□ -0.36
SCARNA16.1-201ENST00000516133 JAKMIP3Q5VZ66 844 aa12.79□□□□□ -0.36
SCARNA16.1-201ENST00000516133 RPUSD2Q8IZ73 545 aaKnown RBP12.79□□□□□ -0.36
SCARNA16.1-201ENST00000516133 RETREG2Q8NC44 543 aa12.79□□□□□ -0.36
SCARNA16.1-201ENST00000516133 GPR20Q99678 358 aa12.79□□□□□ -0.36
SCARNA16.1-201ENST00000516133 C16orf70Q9BSU1 422 aa12.79□□□□□ -0.36
SCARNA16.1-201ENST00000516133 TUT1Q9H6E5 874 aaKnown RBP12.79□□□□□ -0.36
SCARNA16.1-201ENST00000516133 BCAS3Q9H6U6 928 aa12.79□□□□□ -0.36
SCARNA16.1-201ENST00000516133 KCNH7Q9NS40 1196 aa12.79□□□□□ -0.36
SCARNA16.1-201ENST00000516133 TMEM260Q9NX78 707 aa12.79□□□□□ -0.36
SCARNA16.1-201ENST00000516133 PITPNM1O00562 1244 aa12.78□□□□□ -0.36
SCARNA16.1-201ENST00000516133 PFKFB2O60825 505 aa12.78□□□□□ -0.36
SCARNA16.1-201ENST00000516133 ATP9AO75110 1047 aa12.78□□□□□ -0.36
SCARNA16.1-201ENST00000516133 CYP3A4P08684 503 aa12.78□□□□□ -0.36
SCARNA16.1-201ENST00000516133 AK2P54819 239 aa12.78□□□□□ -0.36
SCARNA16.1-201ENST00000516133 NLRP5P59047 1200 aa12.78□□□□□ -0.36
SCARNA16.1-201ENST00000516133 ARHGAP4P98171 946 aa12.78□□□□□ -0.36
SCARNA16.1-201ENST00000516133 SCRN1Q12765 414 aa12.78□□□□□ -0.36
SCARNA16.1-201ENST00000516133 C9orf50Q5SZB4 431 aa12.78□□□□□ -0.36
SCARNA16.1-201ENST00000516133 GALNT17Q6IS24 598 aa12.78□□□□□ -0.36
SCARNA16.1-201ENST00000516133 NIPA1Q7RTP0 329 aa12.78□□□□□ -0.36
SCARNA16.1-201ENST00000516133 CCDC155Q8N6L0 562 aa12.78□□□□□ -0.36
SCARNA16.1-201ENST00000516133 SEPT1Q8WYJ6 367 aa12.78□□□□□ -0.36
SCARNA16.1-201ENST00000516133 ALG1Q9BT22 464 aa12.78□□□□□ -0.36
SCARNA16.1-201ENST00000516133 IL23AQ9NPF7 189 aa12.78□□□□□ -0.36
SCARNA16.1-201ENST00000516133 HDAC6Q9UBN7 1215 aa12.78□□□□□ -0.36
SCARNA16.1-201ENST00000516133 GTF2IRD1Q9UHL9 959 aa12.78□□□□□ -0.36
SCARNA16.1-201ENST00000516133 TPCN1Q9ULQ1 816 aa12.78□□□□□ -0.36
SCARNA16.1-201ENST00000516133 LTBP2Q14767 1821 aa12.78□□□□□ -0.36
SCARNA16.1-201ENST00000516133 SOX1O00570 391 aaPredicted RBP12.77□□□□□ -0.37
SCARNA16.1-201ENST00000516133 LGALS2P05162 132 aa12.77□□□□□ -0.37
SCARNA16.1-201ENST00000516133 CCL23P55773 120 aa12.77□□□□□ -0.37
SCARNA16.1-201ENST00000516133 GDF6Q6KF10 455 aaPredicted RBP12.77□□□□□ -0.37
SCARNA16.1-201ENST00000516133 PSRC1Q6PGN9 363 aaPredicted RBP12.77□□□□□ -0.37
SCARNA16.1-201ENST00000516133 C16orf59Q7L2K0 433 aa12.77□□□□□ -0.37
SCARNA16.1-201ENST00000516133 CYP2W1Q8TAV3 490 aa12.77□□□□□ -0.37
SCARNA16.1-201ENST00000516133 CAGE1Q8TC20 777 aa12.77□□□□□ -0.37
SCARNA16.1-201ENST00000516133 PPP1R13LQ8WUF5 828 aa12.77□□□□□ -0.37
SCARNA16.1-201ENST00000516133 CRYGNQ8WXF5 182 aa12.77□□□□□ -0.37
SCARNA16.1-201ENST00000516133 LRCH3Q96II8 777 aa12.77□□□□□ -0.37
SCARNA16.1-201ENST00000516133 PGBD1Q96JS3 809 aa12.77□□□□□ -0.37
SCARNA16.1-201ENST00000516133 RNPC3Q96LT9 517 aaKnown RBP12.77□□□□□ -0.37
SCARNA16.1-201ENST00000516133 SDF4Q9BRK5 362 aa12.77□□□□□ -0.37
SCARNA16.1-201ENST00000516133 C22orf23Q9BZE7 217 aa12.77□□□□□ -0.37
SCARNA16.1-201ENST00000516133 VPS54Q9P1Q0 977 aa12.77□□□□□ -0.37
SCARNA16.1-201ENST00000516133 ZNF215Q9UL58 517 aaPredicted RBP12.77□□□□□ -0.37
SCARNA16.1-201ENST00000516133 FGBP02675 491 aa12.76□□□□□ -0.37
SCARNA16.1-201ENST00000516133 PFKMP08237 780 aa12.76□□□□□ -0.37
SCARNA16.1-201ENST00000516133 GNAT1P11488 350 aa12.76□□□□□ -0.37
SCARNA16.1-201ENST00000516133 XBP1P17861 261 aa12.76□□□□□ -0.37
SCARNA16.1-201ENST00000516133 RFC2P35250 354 aa12.76□□□□□ -0.37
SCARNA16.1-201ENST00000516133 USP11P51784 963 aa12.76□□□□□ -0.37
SCARNA16.1-201ENST00000516133 SP4Q02446 784 aa12.76□□□□□ -0.37
SCARNA16.1-201ENST00000516133 C8orf34Q49A92 452 aa12.76□□□□□ -0.37
SCARNA16.1-201ENST00000516133 TMEM240Q5SV17 173 aa12.76□□□□□ -0.37
SCARNA16.1-201ENST00000516133 ZNF365Q70YC5 407 aa12.76□□□□□ -0.37
SCARNA16.1-201ENST00000516133 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.76□□□□□ -0.37
SCARNA16.1-201ENST00000516133 WNT8AQ9H1J5 351 aa12.76□□□□□ -0.37
SCARNA16.1-201ENST00000516133 MTIF3Q9H2K0 278 aaKnown RBP12.76□□□□□ -0.37
SCARNA16.1-201ENST00000516133 AGO4Q9HCK5 861 aaKnown RBP12.76□□□□□ -0.37
SCARNA16.1-201ENST00000516133 JPH1Q9HDC5 661 aaPredicted RBP12.76□□□□□ -0.37
SCARNA16.1-201ENST00000516133 PKD2L1Q9P0L9 805 aa12.76□□□□□ -0.37
SCARNA16.1-201ENST00000516133 SLC9A2Q9UBY0 812 aa12.76□□□□□ -0.37
SCARNA16.1-201ENST00000516133 PCDHA4Q9UN74 947 aa12.76□□□□□ -0.37
SCARNA16.1-201ENST00000516133 NFASCO94856 1347 aa12.76□□□□□ -0.37
SCARNA16.1-201ENST00000516133 UMODL1Q5DID0 1318 aa12.76□□□□□ -0.37
SCARNA16.1-201ENST00000516133 GSTTP1A0A1W2PQM5 241 aa12.75□□□□□ -0.37
SCARNA16.1-201ENST00000516133 FAM86B1E9PN63 330 aa12.75□□□□□ -0.37
SCARNA16.1-201ENST00000516133 PARNO95453 639 aaKnown RBP12.75□□□□□ -0.37
SCARNA16.1-201ENST00000516133 FAM86B2P0C5J1 330 aa12.75□□□□□ -0.37
SCARNA16.1-201ENST00000516133 IQCF3P0C7M6 154 aa12.75□□□□□ -0.37
SCARNA16.1-201ENST00000516133 ARP10275 920 aa12.75□□□□□ -0.37
SCARNA16.1-201ENST00000516133 ACRP10323 421 aa12.75□□□□□ -0.37
SCARNA16.1-201ENST00000516133 CIITAP33076 1130 aa12.75□□□□□ -0.37
SCARNA16.1-201ENST00000516133 TCF7P36402 384 aaPredicted RBP12.75□□□□□ -0.37
SCARNA16.1-201ENST00000516133 SMAD3P84022 425 aaKnown RBP12.75□□□□□ -0.37
SCARNA16.1-201ENST00000516133 PTK7Q13308 1070 aa12.75□□□□□ -0.37
SCARNA16.1-201ENST00000516133 UTP14CQ5TAP6 766 aaKnown RBP12.75□□□□□ -0.37
SCARNA16.1-201ENST00000516133 PLA2G4DQ86XP0 818 aa12.75□□□□□ -0.37
SCARNA16.1-201ENST00000516133 AFAP1L1Q8TED9 768 aa12.75□□□□□ -0.37
SCARNA16.1-201ENST00000516133 WASF1Q92558 559 aa12.75□□□□□ -0.37
SCARNA16.1-201ENST00000516133 GLG1Q92896 1179 aa12.75□□□□□ -0.37
SCARNA16.1-201ENST00000516133 TNPO1Q92973 898 aaKnown RBP12.75□□□□□ -0.37
SCARNA16.1-201ENST00000516133 CTAGE1Q96RT6 745 aa12.75□□□□□ -0.37
SCARNA16.1-201ENST00000516133 SMARCAD1Q9H4L7 1026 aa12.75□□□□□ -0.37
SCARNA16.1-201ENST00000516133 STK36Q9NRP7 1315 aa12.75□□□□□ -0.37
SCARNA16.1-201ENST00000516133 ERAP1Q9NZ08 941 aa12.75□□□□□ -0.37
SCARNA16.1-201ENST00000516133 NRCAMQ92823 1304 aa12.74□□□□□ -0.37
SCARNA16.1-201ENST00000516133 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms