RNA–Protein interactions for RNA: ENST00000516080.1

RNU4-49P-201, Transcript of RNA, U4 small nuclear 49, pseudogene, humanhuman

BASIC

Gene RNU4-49P, Length 140 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-49P-201ENST00000516080 USP53Q70EK8 1073 aa4.75□□□□□ -1.65
RNU4-49P-201ENST00000516080 CELF2-AS1Q8N7Q2 184 aa4.75□□□□□ -1.65
RNU4-49P-201ENST00000516080 DCAF4Q8WV16 495 aa4.75□□□□□ -1.65
RNU4-49P-201ENST00000516080 YTHDC1Q96MU7 727 aaKnown RBP4.75□□□□□ -1.65
RNU4-49P-201ENST00000516080 ZFYVE21Q9BQ24 234 aa4.75□□□□□ -1.65
RNU4-49P-201ENST00000516080 AARSD1Q9BTE6 412 aaKnown RBP4.75□□□□□ -1.65
RNU4-49P-201ENST00000516080 PHF20Q9BVI0 1012 aa4.75□□□□□ -1.65
RNU4-49P-201ENST00000516080 JAM3Q9BX67 310 aa4.75□□□□□ -1.65
RNU4-49P-201ENST00000516080 KLF4O43474 513 aa4.74□□□□□ -1.65
RNU4-49P-201ENST00000516080 LAMTOR5O43504 91 aa4.74□□□□□ -1.65
RNU4-49P-201ENST00000516080 B4GALT3O60512 393 aa4.74□□□□□ -1.65
RNU4-49P-201ENST00000516080 MLLT6P55198 1093 aaPredicted RBP4.74□□□□□ -1.65
RNU4-49P-201ENST00000516080 SPIRE1Q08AE8 756 aa4.74□□□□□ -1.65
RNU4-49P-201ENST00000516080 KIZQ2M2Z5 673 aa4.74□□□□□ -1.65
RNU4-49P-201ENST00000516080 DPH6Q7L8W6 267 aa4.74□□□□□ -1.65
RNU4-49P-201ENST00000516080 ST13P5Q8NFI4 369 aaPredicted RBP4.74□□□□□ -1.65
RNU4-49P-201ENST00000516080 PIP4K2CQ8TBX8 421 aa4.74□□□□□ -1.65
RNU4-49P-201ENST00000516080 ZSWIM3Q96MP5 696 aa4.74□□□□□ -1.65
RNU4-49P-201ENST00000516080 C1QTNF3Q9BXJ4 246 aa4.74□□□□□ -1.65
RNU4-49P-201ENST00000516080 FTSJ1Q9UET6 329 aa4.74□□□□□ -1.65
RNU4-49P-201ENST00000516080 CROTQ9UKG9 612 aa4.74□□□□□ -1.65
RNU4-49P-201ENST00000516080 C1QTNF3-AMACRE9PGA6 284 aa4.73□□□□□ -1.65
RNU4-49P-201ENST00000516080 PRODHO43272 600 aa4.73□□□□□ -1.65
RNU4-49P-201ENST00000516080 MSCO60682 206 aa4.73□□□□□ -1.65
RNU4-49P-201ENST00000516080 PABPC1P11940 636 aaKnown RBP4.73□□□□□ -1.65
RNU4-49P-201ENST00000516080 VASNQ6EMK4 673 aa4.73□□□□□ -1.65
RNU4-49P-201ENST00000516080 PKN3Q6P5Z2 889 aa4.73□□□□□ -1.65
RNU4-49P-201ENST00000516080 TMC5Q6UXY8 1006 aa4.73□□□□□ -1.65
RNU4-49P-201ENST00000516080 NSMFQ6X4W1 530 aa4.73□□□□□ -1.65
RNU4-49P-201ENST00000516080 LBX2Q6XYB7 198 aa4.73□□□□□ -1.65
RNU4-49P-201ENST00000516080 OTOP3Q7RTS5 596 aa4.73□□□□□ -1.65
RNU4-49P-201ENST00000516080 LRRC47Q8N1G4 583 aaKnown RBP4.73□□□□□ -1.65
RNU4-49P-201ENST00000516080 KLHL36Q8N4N3 616 aa4.73□□□□□ -1.65
RNU4-49P-201ENST00000516080 CHST13Q8NET6 341 aa4.73□□□□□ -1.65
RNU4-49P-201ENST00000516080 OSBP2Q969R2 916 aa4.73□□□□□ -1.65
RNU4-49P-201ENST00000516080 ZNF669Q96BR6 464 aaPredicted RBP4.73□□□□□ -1.65
RNU4-49P-201ENST00000516080 C8orf49Q96NF6 230 aa4.73□□□□□ -1.65
RNU4-49P-201ENST00000516080 BARX1Q9HBU1 254 aaPredicted RBP4.73□□□□□ -1.65
RNU4-49P-201ENST00000516080 ARHGEF4Q9NR80 690 aa4.73□□□□□ -1.65
RNU4-49P-201ENST00000516080 TRAV20A0A0B4J274 112 aa4.72□□□□□ -1.65
RNU4-49P-201ENST00000516080 SLC27A2O14975 620 aa4.72□□□□□ -1.65
RNU4-49P-201ENST00000516080 CHGBP05060 677 aa4.72□□□□□ -1.65
RNU4-49P-201ENST00000516080 ZNF20P17024 532 aa4.72□□□□□ -1.65
RNU4-49P-201ENST00000516080 GRK2P25098 689 aa4.72□□□□□ -1.65
RNU4-49P-201ENST00000516080 GRK3P35626 688 aa4.72□□□□□ -1.65
RNU4-49P-201ENST00000516080 GPR85P60893 370 aa4.72□□□□□ -1.65
RNU4-49P-201ENST00000516080 IFRD2Q12894 506 aaPredicted RBP4.72□□□□□ -1.65
RNU4-49P-201ENST00000516080 TUSC3Q13454 348 aa4.72□□□□□ -1.65
RNU4-49P-201ENST00000516080 RAB33AQ14088 237 aa4.72□□□□□ -1.65
RNU4-49P-201ENST00000516080 STYK1Q6J9G0 422 aa4.72□□□□□ -1.65
RNU4-49P-201ENST00000516080 TRMT10BQ6PF06 316 aaKnown RBP4.72□□□□□ -1.65
RNU4-49P-201ENST00000516080 IFNL3Q8IZI9 196 aa4.72□□□□□ -1.65
RNU4-49P-201ENST00000516080 UHMK1Q8TAS1 419 aaKnown RBP4.72□□□□□ -1.65
RNU4-49P-201ENST00000516080 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.72□□□□□ -1.65
RNU4-49P-201ENST00000516080 ZCCHC14Q8WYQ9 949 aaKnown RBP4.72□□□□□ -1.65
RNU4-49P-201ENST00000516080 DVL3Q92997 716 aaPredicted RBP4.72□□□□□ -1.65
RNU4-49P-201ENST00000516080 MBD6Q96DN6 1003 aa4.72□□□□□ -1.65
RNU4-49P-201ENST00000516080 SSBP3Q9BWW4 388 aaPredicted RBP4.72□□□□□ -1.65
RNU4-49P-201ENST00000516080 PDGFDQ9GZP0 370 aaPredicted RBP4.72□□□□□ -1.65
RNU4-49P-201ENST00000516080 DLL4Q9NR61 685 aa4.72□□□□□ -1.65
RNU4-49P-201ENST00000516080 NPEPPSL1A6NEC2 478 aa4.71□□□□□ -1.66
RNU4-49P-201ENST00000516080 GNAT1P11488 350 aa4.71□□□□□ -1.66
RNU4-49P-201ENST00000516080 EPHB4P54760 987 aa4.71□□□□□ -1.66
RNU4-49P-201ENST00000516080 PPP2CBP62714 309 aa4.71□□□□□ -1.66
RNU4-49P-201ENST00000516080 PPP2CAP67775 309 aa4.71□□□□□ -1.66
RNU4-49P-201ENST00000516080 GRIN1Q05586 938 aa4.71□□□□□ -1.66
RNU4-49P-201ENST00000516080 ARHGEF18Q6ZSZ5 1173 aa4.71□□□□□ -1.66
RNU4-49P-201ENST00000516080 LIMS2Q7Z4I7 341 aa4.71□□□□□ -1.66
RNU4-49P-201ENST00000516080 PROSER1Q86XN7 944 aa4.71□□□□□ -1.66
RNU4-49P-201ENST00000516080 KBTBD2Q8IY47 623 aa4.71□□□□□ -1.66
RNU4-49P-201ENST00000516080 DTX3Q8N9I9 347 aa4.71□□□□□ -1.66
RNU4-49P-201ENST00000516080 CLEC4DQ8WXI8 215 aa4.71□□□□□ -1.66
RNU4-49P-201ENST00000516080 KCNJ15Q99712 375 aa4.71□□□□□ -1.66
RNU4-49P-201ENST00000516080 KRTAP3-1Q9BYR8 98 aa4.71□□□□□ -1.66
RNU4-49P-201ENST00000516080 TRIM55Q9BYV6 548 aa4.71□□□□□ -1.66
RNU4-49P-201ENST00000516080 TMPRSS5Q9H3S3 457 aa4.71□□□□□ -1.66
RNU4-49P-201ENST00000516080 PPP4R1LQ9P1A2 415 aa4.71□□□□□ -1.66
RNU4-49P-201ENST00000516080 PPARGC1AQ9UBK2 798 aaKnown RBP4.71□□□□□ -1.66
RNU4-49P-201ENST00000516080 WASF3Q9UPY6 502 aa4.71□□□□□ -1.66
RNU4-49P-201ENST00000516080 FAM47E-STBD1D6RA91 191 aa4.7□□□□□ -1.66
RNU4-49P-201ENST00000516080 FBXO21O94952 628 aa4.7□□□□□ -1.66
RNU4-49P-201ENST00000516080 COL6A2P12110 1019 aa4.7□□□□□ -1.66
RNU4-49P-201ENST00000516080 FAHP16930 419 aa4.7□□□□□ -1.66
RNU4-49P-201ENST00000516080 NFATC3Q12968 1075 aa4.7□□□□□ -1.66
RNU4-49P-201ENST00000516080 SMAD2Q15796 467 aaKnown RBP4.7□□□□□ -1.66
RNU4-49P-201ENST00000516080 NTRK3Q16288 839 aa4.7□□□□□ -1.66
RNU4-49P-201ENST00000516080 PAN2Q504Q3 1202 aaKnown RBP4.7□□□□□ -1.66
RNU4-49P-201ENST00000516080 HABP4Q5JVS0 413 aaKnown RBP4.7□□□□□ -1.66
RNU4-49P-201ENST00000516080 KCNT2Q6UVM3 1135 aa4.7□□□□□ -1.66
RNU4-49P-201ENST00000516080 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.7□□□□□ -1.66
RNU4-49P-201ENST00000516080 CIR1Q86X95 450 aaPredicted RBP4.7□□□□□ -1.66
RNU4-49P-201ENST00000516080 IGDCC4Q8TDY8 1250 aa4.7□□□□□ -1.66
RNU4-49P-201ENST00000516080 KISS1RQ969F8 398 aaPredicted RBP4.7□□□□□ -1.66
RNU4-49P-201ENST00000516080 ZNF428Q96B54 188 aa4.7□□□□□ -1.66
RNU4-49P-201ENST00000516080 ALG1Q9BT22 464 aa4.7□□□□□ -1.66
RNU4-49P-201ENST00000516080 JADE2Q9NQC1 790 aa4.7□□□□□ -1.66
RNU4-49P-201ENST00000516080 DSEQ9UL01 958 aa4.7□□□□□ -1.66
RNU4-49P-201ENST00000516080 U2SURPO15042 1029 aaKnown RBP4.69□□□□□ -1.66
RNU4-49P-201ENST00000516080 SOD2P04179 222 aa4.69□□□□□ -1.66
RNU4-49P-201ENST00000516080 CKMP06732 381 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms