RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 ERCC3P19447 782 aa8.55□□□□□ -1.04
SCARNA20.1-201ENST00000516009 BMP6P22004 513 aa8.55□□□□□ -1.04
SCARNA20.1-201ENST00000516009 PLCB2Q00722 1185 aa8.55□□□□□ -1.04
SCARNA20.1-201ENST00000516009 MCM6Q14566 821 aa8.55□□□□□ -1.04
SCARNA20.1-201ENST00000516009 KCNB1Q14721 858 aa8.55□□□□□ -1.04
SCARNA20.1-201ENST00000516009 ECM1Q16610 540 aa8.55□□□□□ -1.04
SCARNA20.1-201ENST00000516009 CT47A1Q5JQC4 288 aaPredicted RBP8.55□□□□□ -1.04
SCARNA20.1-201ENST00000516009 POTEBQ6S5H4 581 aa8.55□□□□□ -1.04
SCARNA20.1-201ENST00000516009 ANKRD23Q86SG2 305 aa8.55□□□□□ -1.04
SCARNA20.1-201ENST00000516009 NLRX1Q86UT6 975 aa8.55□□□□□ -1.04
SCARNA20.1-201ENST00000516009 VSIG10LQ86VR7 867 aa8.55□□□□□ -1.04
SCARNA20.1-201ENST00000516009 CATSPER3Q86XQ3 398 aa8.55□□□□□ -1.04
SCARNA20.1-201ENST00000516009 KCTD17Q8N5Z5 321 aa8.55□□□□□ -1.04
SCARNA20.1-201ENST00000516009 DNERQ8NFT8 737 aa8.55□□□□□ -1.04
SCARNA20.1-201ENST00000516009 BRI3BPQ8WY22 251 aa8.55□□□□□ -1.04
SCARNA20.1-201ENST00000516009 GPRASP2Q96D09 838 aa8.55□□□□□ -1.04
SCARNA20.1-201ENST00000516009 IWS1Q96ST2 819 aa8.55□□□□□ -1.04
SCARNA20.1-201ENST00000516009 C7orf25Q9BPX7 421 aa8.55□□□□□ -1.04
SCARNA20.1-201ENST00000516009 EIF2AK1Q9BQI3 630 aaKnown RBP8.55□□□□□ -1.04
SCARNA20.1-201ENST00000516009 POLR3CQ9BUI4 534 aaPredicted RBP8.55□□□□□ -1.04
SCARNA20.1-201ENST00000516009 TRIM9Q9C026 710 aa8.55□□□□□ -1.04
SCARNA20.1-201ENST00000516009 MROH8Q9H579 483 aa8.55□□□□□ -1.04
SCARNA20.1-201ENST00000516009 AGO4Q9HCK5 861 aaKnown RBP8.55□□□□□ -1.04
SCARNA20.1-201ENST00000516009 BMP2KQ9NSY1 1161 aaPredicted RBP8.55□□□□□ -1.04
SCARNA20.1-201ENST00000516009 TBC1D22BQ9NU19 505 aa8.55□□□□□ -1.04
SCARNA20.1-201ENST00000516009 PKD2L1Q9P0L9 805 aa8.55□□□□□ -1.04
SCARNA20.1-201ENST00000516009 ADD3Q9UEY8 706 aaKnown RBP8.55□□□□□ -1.04
SCARNA20.1-201ENST00000516009 TCEAL9Q9UHQ7 104 aa8.55□□□□□ -1.04
SCARNA20.1-201ENST00000516009 POTEFA5A3E0 1075 aa8.54□□□□□ -1.04
SCARNA20.1-201ENST00000516009 B4DLN1 442 aa8.54□□□□□ -1.04
SCARNA20.1-201ENST00000516009 E9PMD0 336 aa8.54□□□□□ -1.04
SCARNA20.1-201ENST00000516009 DDX39AO00148 427 aaKnown RBP8.54□□□□□ -1.04
SCARNA20.1-201ENST00000516009 EML1O00423 815 aa8.54□□□□□ -1.04
SCARNA20.1-201ENST00000516009 MAFGO15525 162 aa8.54□□□□□ -1.04
SCARNA20.1-201ENST00000516009 SSBP05455 408 aaKnown RBP eCLIP8.54□□□□□ -1.04
SCARNA20.1-201ENST00000516009 PLA2G4BP0C869 781 aa8.54□□□□□ -1.04
SCARNA20.1-201ENST00000516009 SPATA31C1P0DKV0 1188 aa8.54□□□□□ -1.04
SCARNA20.1-201ENST00000516009 CYP2C8P10632 490 aa8.54□□□□□ -1.04
SCARNA20.1-201ENST00000516009 MUTP22033 750 aa8.54□□□□□ -1.04
SCARNA20.1-201ENST00000516009 GCLCP48506 637 aaPredicted RBP8.54□□□□□ -1.04
SCARNA20.1-201ENST00000516009 ERVK-9P63128 1117 aa8.54□□□□□ -1.04
SCARNA20.1-201ENST00000516009 ERVK-24P63145 666 aa8.54□□□□□ -1.04
SCARNA20.1-201ENST00000516009 ASIC1P78348 528 aa8.54□□□□□ -1.04
SCARNA20.1-201ENST00000516009 CCNA1P78396 465 aa8.54□□□□□ -1.04
SCARNA20.1-201ENST00000516009 MYL5Q02045 173 aa8.54□□□□□ -1.04
SCARNA20.1-201ENST00000516009 CYP4A11Q02928 519 aa8.54□□□□□ -1.04
SCARNA20.1-201ENST00000516009 EPHA7Q15375 998 aa8.54□□□□□ -1.04
SCARNA20.1-201ENST00000516009 GNPTABQ3T906 1256 aa8.54□□□□□ -1.04
SCARNA20.1-201ENST00000516009 ZNF658Q5TYW1 1059 aaPredicted RBP8.54□□□□□ -1.04
SCARNA20.1-201ENST00000516009 POTEGQ6S5H5 508 aa8.54□□□□□ -1.04
SCARNA20.1-201ENST00000516009 B3GNT9Q6UX72 402 aa8.54□□□□□ -1.04
SCARNA20.1-201ENST00000516009 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.54□□□□□ -1.04
SCARNA20.1-201ENST00000516009 KCNK18Q7Z418 384 aa8.54□□□□□ -1.04
SCARNA20.1-201ENST00000516009 SHCBP1Q8NEM2 672 aa8.54□□□□□ -1.04
SCARNA20.1-201ENST00000516009 NEK9Q8TD19 979 aa8.54□□□□□ -1.04
SCARNA20.1-201ENST00000516009 CDHR1Q96JP9 859 aa8.54□□□□□ -1.04
SCARNA20.1-201ENST00000516009 PPP1R9BQ96SB3 815 aa8.54□□□□□ -1.04
SCARNA20.1-201ENST00000516009 PARK7Q99497 189 aaKnown RBP8.54□□□□□ -1.04
SCARNA20.1-201ENST00000516009 MMP19Q99542 508 aa8.54□□□□□ -1.04
SCARNA20.1-201ENST00000516009 MPHOSPH6Q99547 160 aaKnown RBP8.54□□□□□ -1.04
SCARNA20.1-201ENST00000516009 GTPBP4Q9BZE4 634 aaKnown RBP8.54□□□□□ -1.04
SCARNA20.1-201ENST00000516009 UNC45AQ9H3U1 944 aa8.54□□□□□ -1.04
SCARNA20.1-201ENST00000516009 GPBP1L1Q9HC44 474 aaPredicted RBP8.54□□□□□ -1.04
SCARNA20.1-201ENST00000516009 TXNRD2Q9NNW7 524 aa8.54□□□□□ -1.04
SCARNA20.1-201ENST00000516009 TUFT1Q9NNX1 390 aa8.54□□□□□ -1.04
SCARNA20.1-201ENST00000516009 DNM3Q9UQ16 869 aa8.54□□□□□ -1.04
SCARNA20.1-201ENST00000516009 MCM3APO60318 1980 aa8.53□□□□□ -1.04
SCARNA20.1-201ENST00000516009 MYH9P35579 1960 aaKnown RBP8.53□□□□□ -1.04
SCARNA20.1-201ENST00000516009 MYH11P35749 1972 aa8.53□□□□□ -1.04
SCARNA20.1-201ENST00000516009 MANSC4A6NHS7 340 aaPredicted RBP8.53□□□□□ -1.04
SCARNA20.1-201ENST00000516009 MYMKA6NI61 221 aa8.53□□□□□ -1.04
SCARNA20.1-201ENST00000516009 KLRC4O43908 158 aa8.53□□□□□ -1.04
SCARNA20.1-201ENST00000516009 EIF3JO75822 258 aaKnown RBP8.53□□□□□ -1.04
SCARNA20.1-201ENST00000516009 RHOBTB3O94955 611 aa8.53□□□□□ -1.04
SCARNA20.1-201ENST00000516009 ADCY5O95622 1261 aa8.53□□□□□ -1.04
SCARNA20.1-201ENST00000516009 KRT18P05783 430 aaKnown RBP8.53□□□□□ -1.04
SCARNA20.1-201ENST00000516009 ERCC5P28715 1186 aaPredicted RBP8.53□□□□□ -1.04
SCARNA20.1-201ENST00000516009 ALDH5A1P51649 535 aaPredicted RBP8.53□□□□□ -1.04
SCARNA20.1-201ENST00000516009 ZNF157P51786 506 aaPredicted RBP8.53□□□□□ -1.04
SCARNA20.1-201ENST00000516009 CNTN2Q02246 1040 aa8.53□□□□□ -1.04
SCARNA20.1-201ENST00000516009 PDE4DQ08499 809 aa8.53□□□□□ -1.04
SCARNA20.1-201ENST00000516009 ITGB3BPQ13352 177 aaPredicted RBP8.53□□□□□ -1.04
SCARNA20.1-201ENST00000516009 STIM1Q13586 685 aa8.53□□□□□ -1.04
SCARNA20.1-201ENST00000516009 KCTD2Q14681 263 aa8.53□□□□□ -1.04
SCARNA20.1-201ENST00000516009 STXBP2Q15833 593 aa8.53□□□□□ -1.04
SCARNA20.1-201ENST00000516009 Q3C1V9 767 aa8.53□□□□□ -1.04
SCARNA20.1-201ENST00000516009 KMT5BQ4FZB7 885 aa8.53□□□□□ -1.04
SCARNA20.1-201ENST00000516009 WDR78Q5VTH9 848 aa8.53□□□□□ -1.04
SCARNA20.1-201ENST00000516009 CNNM4Q6P4Q7 775 aa8.53□□□□□ -1.04
SCARNA20.1-201ENST00000516009 UNC13DQ70J99 1090 aa8.53□□□□□ -1.04
SCARNA20.1-201ENST00000516009 DYMQ7RTS9 669 aa8.53□□□□□ -1.04
SCARNA20.1-201ENST00000516009 MIER3Q7Z3K6 550 aa8.53□□□□□ -1.04
SCARNA20.1-201ENST00000516009 GPBP1Q86WP2 473 aa8.53□□□□□ -1.04
SCARNA20.1-201ENST00000516009 RASAL3Q86YV0 1011 aa8.53□□□□□ -1.04
SCARNA20.1-201ENST00000516009 TPH2Q8IWU9 490 aa8.53□□□□□ -1.04
SCARNA20.1-201ENST00000516009 FAM43AQ8N2R8 423 aa8.53□□□□□ -1.04
SCARNA20.1-201ENST00000516009 FAM133AQ8N9E0 248 aa8.53□□□□□ -1.04
SCARNA20.1-201ENST00000516009 GPRC5AQ8NFJ5 357 aa8.53□□□□□ -1.04
SCARNA20.1-201ENST00000516009 DYDC2Q96IM9 177 aa8.53□□□□□ -1.04
SCARNA20.1-201ENST00000516009 PDLIM2Q96JY6 352 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms