RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 SLPIP03973 132 aa5.04□□□□□ -1.6
HERC4-215ENST00000515753 TACR2P21452 398 aa5.04□□□□□ -1.6
HERC4-215ENST00000515753 IL13P35225 146 aa5.04□□□□□ -1.6
HERC4-215ENST00000515753 ECI1P42126 302 aa5.04□□□□□ -1.6
HERC4-215ENST00000515753 HMGA2P52926 109 aa5.04□□□□□ -1.6
HERC4-215ENST00000515753 PPP2R2AP63151 447 aa5.04□□□□□ -1.6
HERC4-215ENST00000515753 RASA3Q14644 834 aa5.04□□□□□ -1.6
HERC4-215ENST00000515753 SLC35F1Q5T1Q4 408 aa5.04□□□□□ -1.6
HERC4-215ENST00000515753 MROH9Q5TGP6 573 aa5.04□□□□□ -1.6
HERC4-215ENST00000515753 IQCEQ6IPM2 695 aa5.04□□□□□ -1.6
HERC4-215ENST00000515753 KREMEN2Q8NCW0 462 aa5.04□□□□□ -1.6
HERC4-215ENST00000515753 IGDCC4Q8TDY8 1250 aa5.04□□□□□ -1.6
HERC4-215ENST00000515753 MKL1Q969V6 931 aa5.04□□□□□ -1.6
HERC4-215ENST00000515753 TMEM169Q96HH4 297 aa5.04□□□□□ -1.6
HERC4-215ENST00000515753 KLC2Q9H0B6 622 aa5.04□□□□□ -1.6
HERC4-215ENST00000515753 TSC22D4Q9Y3Q8 395 aa5.04□□□□□ -1.6
HERC4-215ENST00000515753 C9orf118A6NHY6 69 aa5.03□□□□□ -1.6
HERC4-215ENST00000515753 PDPK1O15530 556 aa5.03□□□□□ -1.6
HERC4-215ENST00000515753 FGFR1P11362 822 aa5.03□□□□□ -1.6
HERC4-215ENST00000515753 GDF5P43026 501 aa5.03□□□□□ -1.6
HERC4-215ENST00000515753 SF1Q15637 639 aaKnown RBP5.03□□□□□ -1.6
HERC4-215ENST00000515753 PRSS53Q2L4Q9 553 aa5.03□□□□□ -1.6
HERC4-215ENST00000515753 RIOX2Q8IUF8 465 aa5.03□□□□□ -1.6
HERC4-215ENST00000515753 LRRC47Q8N1G4 583 aaKnown RBP5.03□□□□□ -1.6
HERC4-215ENST00000515753 DIO2Q92813 273 aa5.03□□□□□ -1.6
HERC4-215ENST00000515753 MBD6Q96DN6 1003 aa5.03□□□□□ -1.6
HERC4-215ENST00000515753 CHAMP1Q96JM3 812 aa5.03□□□□□ -1.6
HERC4-215ENST00000515753 YTHDC1Q96MU7 727 aaKnown RBP5.03□□□□□ -1.6
HERC4-215ENST00000515753 MRIQ9BWK5 157 aa5.03□□□□□ -1.6
HERC4-215ENST00000515753 TMEM168Q9H0V1 697 aa5.03□□□□□ -1.6
HERC4-215ENST00000515753 CD248Q9HCU0 757 aa5.03□□□□□ -1.6
HERC4-215ENST00000515753 JADE2Q9NQC1 790 aa5.03□□□□□ -1.6
HERC4-215ENST00000515753 ST7Q9NRC1 585 aa5.03□□□□□ -1.6
HERC4-215ENST00000515753 LRP2BPQ9P2M1 347 aa5.03□□□□□ -1.6
HERC4-215ENST00000515753 WASF3Q9UPY6 502 aa5.03□□□□□ -1.6
HERC4-215ENST00000515753 NPFFR2Q9Y5X5 522 aa5.03□□□□□ -1.6
HERC4-215ENST00000515753 X6R8D5 127 aa5.03□□□□□ -1.6
HERC4-215ENST00000515753 B4GALT4O60513 344 aa5.02□□□□□ -1.61
HERC4-215ENST00000515753 AMHP03971 560 aa5.02□□□□□ -1.61
HERC4-215ENST00000515753 SNRPB2P08579 225 aaKnown RBP5.02□□□□□ -1.61
HERC4-215ENST00000515753 LCP1P13796 627 aa5.02□□□□□ -1.61
HERC4-215ENST00000515753 GTF2F1P35269 517 aaKnown RBP eCLIP5.02□□□□□ -1.61
HERC4-215ENST00000515753 KRTAP1-1Q07627 177 aa5.02□□□□□ -1.61
HERC4-215ENST00000515753 HSP90AA2PQ14568 343 aaPredicted RBP5.02□□□□□ -1.61
HERC4-215ENST00000515753 SURF1Q15526 300 aa5.02□□□□□ -1.61
HERC4-215ENST00000515753 RCBTB1Q8NDN9 531 aa5.02□□□□□ -1.61
HERC4-215ENST00000515753 ZCCHC14Q8WYQ9 949 aaKnown RBP5.02□□□□□ -1.61
HERC4-215ENST00000515753 TOE1Q96GM8 510 aaKnown RBP5.02□□□□□ -1.61
HERC4-215ENST00000515753 CLIC6Q96NY7 704 aa5.02□□□□□ -1.61
HERC4-215ENST00000515753 AARSD1Q9BTE6 412 aaKnown RBP5.02□□□□□ -1.61
HERC4-215ENST00000515753 DEF6Q9H4E7 631 aa5.02□□□□□ -1.61
HERC4-215ENST00000515753 NGRNQ9NPE2 291 aaKnown RBP5.02□□□□□ -1.61
HERC4-215ENST00000515753 ARHGEF4Q9NR80 690 aa5.02□□□□□ -1.61
HERC4-215ENST00000515753 RBPJLQ9UBG7 517 aa5.02□□□□□ -1.61
HERC4-215ENST00000515753 COA3Q9Y2R0 106 aaPredicted RBP5.02□□□□□ -1.61
HERC4-215ENST00000515753 ZDHHC9Q9Y397 364 aa5.02□□□□□ -1.61
HERC4-215ENST00000515753 PCDHA2Q9Y5H9 948 aa5.02□□□□□ -1.61
HERC4-215ENST00000515753 TCRBV5S2A0A599 114 aa5.01□□□□□ -1.61
HERC4-215ENST00000515753 OVOL3O00110 214 aa5.01□□□□□ -1.61
HERC4-215ENST00000515753 HGSO14964 777 aaPredicted RBP5.01□□□□□ -1.61
HERC4-215ENST00000515753 MEFVO15553 781 aaPredicted RBP5.01□□□□□ -1.61
HERC4-215ENST00000515753 MYO1BO43795 1136 aa5.01□□□□□ -1.61
HERC4-215ENST00000515753 GTF2A2P52657 109 aa5.01□□□□□ -1.61
HERC4-215ENST00000515753 PPP2CBP62714 309 aa5.01□□□□□ -1.61
HERC4-215ENST00000515753 PPP2CAP67775 309 aa5.01□□□□□ -1.61
HERC4-215ENST00000515753 LONRF2Q1L5Z9 754 aa5.01□□□□□ -1.61
HERC4-215ENST00000515753 PHF19Q5T6S3 580 aa5.01□□□□□ -1.61
HERC4-215ENST00000515753 CRIP3Q6Q6R5 217 aa5.01□□□□□ -1.61
HERC4-215ENST00000515753 TEPPQ6URK8 271 aa5.01□□□□□ -1.61
HERC4-215ENST00000515753 TMC5Q6UXY8 1006 aa5.01□□□□□ -1.61
HERC4-215ENST00000515753 ARHGEF18Q6ZSZ5 1173 aa5.01□□□□□ -1.61
HERC4-215ENST00000515753 PLEKHH3Q7Z736 793 aa5.01□□□□□ -1.61
HERC4-215ENST00000515753 CIR1Q86X95 450 aaPredicted RBP5.01□□□□□ -1.61
HERC4-215ENST00000515753 KBTBD2Q8IY47 623 aa5.01□□□□□ -1.61
HERC4-215ENST00000515753 TMEM145Q8NBT3 493 aa5.01□□□□□ -1.61
HERC4-215ENST00000515753 KCTD13Q8WZ19 329 aa5.01□□□□□ -1.61
HERC4-215ENST00000515753 ZNF747Q9BV97 191 aa5.01□□□□□ -1.61
HERC4-215ENST00000515753 VPS11Q9H270 941 aa5.01□□□□□ -1.61
HERC4-215ENST00000515753 DTLQ9NZJ0 730 aa5.01□□□□□ -1.61
HERC4-215ENST00000515753 ZNF652Q9Y2D9 606 aa5.01□□□□□ -1.61
HERC4-215ENST00000515753 ADCY3O60266 1144 aa5□□□□□ -1.61
HERC4-215ENST00000515753 LRG1P02750 347 aa5□□□□□ -1.61
HERC4-215ENST00000515753 LTBRP36941 435 aa5□□□□□ -1.61
HERC4-215ENST00000515753 ACVRL1P37023 503 aa5□□□□□ -1.61
HERC4-215ENST00000515753 KCNJ6P48051 423 aa5□□□□□ -1.61
HERC4-215ENST00000515753 STEAP3Q658P3 488 aa5□□□□□ -1.61
HERC4-215ENST00000515753 DENND5AQ6IQ26 1287 aa5□□□□□ -1.61
HERC4-215ENST00000515753 TRMT10BQ6PF06 316 aaKnown RBP5□□□□□ -1.61
HERC4-215ENST00000515753 RSPO2Q6UXX9 243 aaPredicted RBP5□□□□□ -1.61
HERC4-215ENST00000515753 PPIL6Q8IXY8 311 aa5□□□□□ -1.61
HERC4-215ENST00000515753 JMYQ8N9B5 988 aa5□□□□□ -1.61
HERC4-215ENST00000515753 WWC2-AS2Q96NR7 200 aa5□□□□□ -1.61
HERC4-215ENST00000515753 DEPDC7Q96QD5 511 aa5□□□□□ -1.61
HERC4-215ENST00000515753 SPATA9Q9BWV2 254 aa5□□□□□ -1.61
HERC4-215ENST00000515753 CLDND1Q9NY35 253 aa5□□□□□ -1.61
HERC4-215ENST00000515753 PCDHB4Q9Y5E5 795 aa5□□□□□ -1.61
HERC4-215ENST00000515753 TRAV20A0A0B4J274 112 aa4.99□□□□□ -1.61
HERC4-215ENST00000515753 DLX3O60479 287 aa4.99□□□□□ -1.61
HERC4-215ENST00000515753 TADA3O75528 432 aa4.99□□□□□ -1.61
HERC4-215ENST00000515753 GRIA2P42262 883 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms